Basic Information

Insect: Rhamnusium bicolor
Gene Symbol: ct_1
Assembly: GCA_029963845.1
Location: JANEYF010003975.1:1142742-1165442[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.4e-28 1.4e-23 84.7 0.0 2 72 301 372 300 377 0.95

2 4 0.56 1.5e+04 -1.9 0.0 28 57 399 428 397 430 0.82

3 4 2.3e-32 6.1e-28 98.7 0.0 3 77 700 775 698 777 0.96

4 4 1.4e-30 3.7e-26 93.0 0.0 3 75 911 984 909 988 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.4e-28	1.4e-23	84.7	2	72	301	372	300	377	0.95
2	4	0.56	1.5e+04	-1.9	28	57	399	428	397	430	0.82
3	4	2.3e-32	6.1e-28	98.7	3	77	700	775	698	777	0.96
4	4	1.4e-30	3.7e-26	93.0	3	75	911	984	909	988	0.95

Sequence Information

Coding Sequence: ATGCCGCCCACGCGATATTATTCCTCACTAAGCGATAGCATGGCCATAAGACACACTGTAATATACAACGTTATAAAGATCTGTACAGTAAAATGTAGGTTTGATATGGATATCTTCTTTTACACTCGTCTGACTGTTGATAAAACGATAAATCACAAAAAAGATTATGACGACTTAAAACGAGAAATCAGTATATTAAGGTCGGATCTCGCCAACAATCCCGATGGAACAAGTATAGAACTATTGCTGGAGAAAACTAAGAGCTTGGCACAAGAAAACAGAGAGAAGTCACCTTCGAGAGAAAACGAAGGGGTTGAACAACTTCAAACACAACCCCCAATCCTTTCGGTTACCCCTCCAAACAACCTCCCACCTCCCTTTCAAAACGTAGATGCATTTGGTAGTTTACTTGGCGAAGAAATCGTTTCTTCGTGGAGAAGGAATATAGAACAAAACAGAATAACACCAAAATCACCCTCTGCTTCTCTAGATGGCCCAGTAAAGAGTACCACACCAGTAAACGCCGATTCTACCGCAGAACAAAGTTCGGCTTCCACCCCGCAACCCTCCGAACAAACCTGCCAGCCGTCGCCGGTGGAAAACTTGGTTAACGGCAACCCGAAAAGCCCCCAAGAAGACAACAACAATCACCATGTCGGCAACAACAACATTCCTCTTACCGCCACGATGTGCGCCGTCAACAATTTCTTAAGAAACGACGACTCGCTTAAAAGTCCGTACCGATTCGACGATCACAGGTCCCCATTTAAGTTTGCCGAGGAATTGGGGATGGCCCCAGGCTCCATGGTAGGCAGATTGGGGGAGAGTCTTATACCAAAGGGGGACCCAATGGAAGCCAGGCTGCAAGAGATGTTGAGGTACAACATGGACAAATATGCATCGCAAAACTTAGatACTCTTCACATAGCAAGGCGAGTTAGAGAGCTGCTATCCATCCATAACATCGGTCAAAGGCTGTTCGCTAAGTACGTTTTGGGCCTATCCCAAGGCACGGTTTCGGAATTATTATCAAAACCTAAACCTTGGGATAAACTGACTGAAAAGGGAAGAGACAGTTATAGGAAAATGCACGCCTGGGCGTGCGATGAAAACGCCATTTTATTACTGAAATCACTGATACCAAAGAAAGACCATTTTTCGTCAACAGGCAAATCAGAAACAGGAATGCCAACATTTGGAAGGCCTGAAGCTGATCTAACCGAAGAGAGACTTGCGCATATATTAAACGAAGCAAACCAATTTCAACACATTAAACAGCAACAGCAACAGCCTGAAGATAGCCATAGCAATGAGGATTCAAAGTCGCCTCACGGTTGCAGTAGCCCGTTTTCCAGAGATTCCTCGTTGAATAAGAGActgaaaaaatacgaaaatgaCGATATTTCCCAAGAAAAAGTGGTTAGAATTTACCAAGAGGAACTAGCAAAACTTATGGGGAGAAGAATCGAGGATATGCGCAACCCTCGAGAAGGTGGTTTCCCTGGtattttcctccctcaaCTATTTAGCAGCAACACAATGGACAGGACCCAGGATGATATCCGCATAGCTCTGGATGCGTATCATCGTGAATTGGCCAAGTTAAACCAAGGACAAACGACCACTCAAATGCCTTTAAGCCTGCTAGCCATCCAACAACAAGCGTTGGCACACCATCACCAGCAACAACAGCAACACCAACAAAATCAAAGCTCGAACGGTGGAGTACAGGATTTATCCATACCAaaagataaaatgaaaatgatgaaCGGAGCAATGGACGACAAAGACAAGGATGATGACACAATGTCACGCCATTCCGGCTCCGCCTTTAGTCTAGTAAGGCCCAAAATTGAACCAGGTTCCCAGCAGAATACAGGTTCAACGGCATCAAGTCCTTTAGGCAACTCTATTTTACCGCCGTTGACCCCAAACGATGACTTCTCCGGATCTGCAGCTGCCTCACCTCTTCAACGAATGGCAAGCATTACAAACTCACTCATATCACAACCCCCGACGCAGCCACATCACACCACAAACAACAGACCTCTGAAAGCGGTATTACCTCCTATAACCCAACAACAGTTCGATCTTTATAACAACCTCAATACGGAAGATATCGTAAAAAAAGTTAAGGAACAACTAAGTCAGTACTCAATAAGCCAAAGACTTTTCGGTGAAAGCGTACTAGGCCTATCACAAGGCTCTGTTAGTGACCTCTTAGCGAGACCTAAGCCCTGGCATATGTTGACACAGAAAGGACGAGAACCGTTTATTAGGATGAAAATGTTCCTGGAAGATGACAATGCCGTACACAAATTAGTAGCCAGTCAATACAAAATAGCACCGGAAAAACTCATGAGGACCGGAGGATATGGAGGAGCATGTTCTTCCATTGGGAAACCAATGCCCCCAACTACTAAAATGTTGTCCGAAGCAGCTGGTCTACTTAACAAGATGCAAGAATCTCAAAATATTTTGCCACCCTCACTCCAACTAGGGCCACCCCAGAGTTCTAATCCCCAACCCCCGCCACCGCCTATGCTTTTGACGCCCCCTGGACTACCTCCACATCACGCCATCAGTTTACAAACTCCCGAtcacatattgaaaaaatccaaTCAGAGTCCACATGGCATTCCACATTCTCCAATGGCCCAACAACACGCGTCCCTGAGAAACATGCATCAACATATGTCGCCCAGCGTTTACGAAATGGCGGCGTTGACCCAAGACTTAGACACTCAAGTTATCACCACTAAAATTAAAGAAGCTTTATTAGCTAATAATATTGGACAAAAGATTTTCGGAGAAGCCGTACTAGGACTCTCTCAAGGATCTGTAAGTGAATTATTATCCAAACCCAAACCATGGCATATGCTTAGCATCAAAGGTCGGGAACCGTTCATCAGAATGCAACTGTGGTTAAATGACGCTCACAATGTCGATCGATTACAGGCACTGAAGAATGAACGACGCGAGGCTAATAAAAGAAGGCGTTCTTCTGGTCCAGGGGCTCACGACAACAGTAGCGACACATCTTCCAATGACACCTCAGAGTTTTACCACTCCAACTCTCCCGGTCCCGGTCCTCCATCCGCCAAAAAACAAAGGGTGCTTTTTAGTGAAGAACAAAAGGAAGCCTTACGACTAGCTTTTGCTTTGGATCCTTACCCCAATGTAGCCACTATTGAATTCCTGGCCGGAGAGCTTGGTTTATCATCTAGAACCATTACAAATTGGTTTCACAATCACAGAATGAGGCTGAAGCAACAAGTACCGCACGGCATGGCCTCCGACCTACCCCCTCGGGATCAAAGTGGAAATCAGCAACCTTTCGACCCTGTCCAATTTAGGTTATTGTTAAACCAAAGACTTCTTGAACTGTCAAAGGAACGAATGGGTTTAAGTGGGGTACCCTTACCTTACCCGCCGTACCTTGCCGCAAATACAAATCTAGCCGCTTTCATAAGTCGCGGATTGTTACCTACCAGTGACATGGATTTATCTGCTTTGAATAATGCTGTTAAGGAGCAGATGAGTGGCCTCGACCTTTCGATGACCTCGTTGAAACGAGAGCCAGGCGATTACGACGACGAGGACGATGTGGAAAGTAACGTAGGGTCGGAAGATTCAAACATGTCCGGCGGAAGTCTACATGGGGAGGTTAAAGTTGAACCTAAAGAAGTACCTACAAGTCAAGGCAGATCATCGCGGCGAAAGCCCGCGGCGCCTCAGTGGGTCAATCCGAACTGGGaggaagagaaagaaaaagCTAGCACGGGCGATGAGGTTATAATTAATGGTGTTTGTGTAATGCAAACTGGAGACGACTACGGCCGAAGAAATTCTGAGGAGACTGTACGTGTCGAACCTCAGGCGGTTTTGGATCGTTTCGATGACGATCAAAGCGATGCATCGTCTATAAGTAACGAAAACGAGCAACACGAGAAAAGTGATGAAAAGTGCGACGATGAGCATGAGGAAAACAACGATGATAGTGAATTAAAAAACGATGATAGTGaaagtaaaattgttaaacaaGAAAATGAGGAGGAAAGGTGGGAGTACTGA
Protein Sequence: MPPTRYYSSLSDSMAIRHTVIYNVIKICTVKCRFDMDIFFYTRLTVDKTINHKKDYDDLKREISILRSDLANNPDGTSIELLLEKTKSLAQENREKSPSRENEGVEQLQTQPPILSVTPPNNLPPPFQNVDAFGSLLGEEIVSSWRRNIEQNRITPKSPSASLDGPVKSTTPVNADSTAEQSSASTPQPSEQTCQPSPVENLVNGNPKSPQEDNNNHHVGNNNIPLTATMCAVNNFLRNDDSLKSPYRFDDHRSPFKFAEELGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAILLLKSLIPKKDHFSSTGKSETGMPTFGRPEADLTEERLAHILNEANQFQHIKQQQQQPEDSHSNEDSKSPHGCSSPFSRDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGRRIEDMRNPREGGFPGIFLPQLFSSNTMDRTQDDIRIALDAYHRELAKLNQGQTTTQMPLSLLAIQQQALAHHHQQQQQHQQNQSSNGGVQDLSIPKDKMKMMNGAMDDKDKDDDTMSRHSGSAFSLVRPKIEPGSQQNTGSTASSPLGNSILPPLTPNDDFSGSAAASPLQRMASITNSLISQPPTQPHHTTNNRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACSSIGKPMPPTTKMLSEAAGLLNKMQESQNILPPSLQLGPPQSSNPQPPPPPMLLTPPGLPPHHAISLQTPDHILKKSNQSPHGIPHSPMAQQHASLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGMASDLPPRDQSGNQQPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAAFISRGLLPTSDMDLSALNNAVKEQMSGLDLSMTSLKREPGDYDDEDDVESNVGSEDSNMSGGSLHGEVKVEPKEVPTSQGRSSRRKPAAPQWVNPNWEEEKEKASTGDEVIINGVCVMQTGDDYGRRNSEETVRVEPQAVLDRFDDDQSDASSISNENEQHEKSDEKCDDEHEENNDDSELKNDDSESKIVKQENEEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01368896;
90% Identity: iTF_01014037;
80% Identity: iTF_01295842;