Rbic055316.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- Xbp1
- Assembly
- GCA_029963845.1
- Location
- JANEYF010004573.1:724675-733356[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-14 6.7e-11 44.1 14.0 2 63 40 101 40 103 0.93 2 2 9.5 3.9e+04 -3.2 0.1 36 47 152 163 145 172 0.63
Sequence Information
- Coding Sequence
- ATGTCTGCTACCGTGCcagcaattttaaaatatttaaatagtcaaGATTTCTCCAtggatcaggataatgatatgcCCCAGCGGGCAAAGAAGAGACGCTTGGATCATTTGTCATgggaagaaaaaatacaaagaaaGAAACTAAAAAATCGCGTGGCAGCCCAGACGTCACGTGACCGAAAAAAAGCCAAAATGGAACAGATGGAACACGCATTACAACAACTTTTCTCACAGAATGAAGCTCTCATGGCAGAATGTGAAAAACTAAAAGTTAGTAACGAGAGGCTCACCGAAGAAAAGACAGAATTAATCCCTCCTTCTACCGCAAGGAAAGGCCACACACTCAGCAGCGGCTTTGAACAACCAACTAGCAGTGATGCTGTGGAAGATAATACTGACCTGCCTTCTCTACCGGACCTGCTCGATGAACTCGACGCAGAAGTCGACATTAACTCTCTGGAGCAACTCACACAGAGCCTTCTTCAAGATATCGCCAGAGACCTGGAAGCAGCTGCTCAGAAAACAGATTGCCAAgaatCAGTCTCTAATCGACAAGACAATTCTGAAGAAATGGTGGGGCCGCCATCAACGAAGTTGGAATCCCATGGATGTGAAATGTTAACAGATGATAAAAAGTCATTAGAGAATGATATCTCTGAATATCTGTTACTTCATCACAACTATGCTGCAAAACCTCCTAAATGCACAAAAAAATCCAAGTCACCTCTTACAAAAAGTAAACTAAAGGCAAtcaaacctaaaaaaaatacaaacatattaaaTACAAGTAAATTAGCCATAGATAATGATACCCCTGTAATATTAACCGAAAACAGTGTTGTTAACGGTAAAATATATGGTTCTTATGATGAGAATATGAACTgtgtaacaattattattgatgAAAATGGAATTCCCATCGATGAGGCTGTTACAGAAGTCGTCACAACGGAAGGAAGCGAAACAATAGCTGCTGAAGACCATGTGCCCGACAACACGATGTTAACCGTTCCATCTCAAATCTGGGGTAATGCTTCCCCCATGTCAACTTCCAGTTCTGATCATGGTTATGAATCTCTAGATTCTCCCAATAGTTTATTAGAGATGGACATTTGGGATCAAAGTGTCTCAGAATTGTTTCCTTCTTTATTCTAA
- Protein Sequence
- MSATVPAILKYLNSQDFSMDQDNDMPQRAKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKMEQMEHALQQLFSQNEALMAECEKLKVSNERLTEEKTELIPPSTARKGHTLSSGFEQPTSSDAVEDNTDLPSLPDLLDELDAEVDINSLEQLTQSLLQDIARDLEAAAQKTDCQESVSNRQDNSEEMVGPPSTKLESHGCEMLTDDKKSLENDISEYLLLHHNYAAKPPKCTKKSKSPLTKSKLKAIKPKKNTNILNTSKLAIDNDTPVILTENSVVNGKIYGSYDENMNCVTIIIDENGIPIDEAVTEVVTTEGSETIAAEDHVPDNTMLTVPSQIWGNASPMSTSSSDHGYESLDSPNSLLEMDIWDQSVSELFPSLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -