Rbic026047.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- cnc
- Assembly
- GCA_029963845.1
- Location
- JANEYF010002177.1:479724-497415[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9 1.6e+04 -2.0 0.8 19 29 302 312 288 324 0.70 2 2 1e-14 4.3e-11 44.7 6.0 3 65 360 422 358 422 0.94
Sequence Information
- Coding Sequence
- ATGAGCAACGTGAATGAAGTACGATTAGCAACGTTCAAGAAAGCCTATAAATTCAAGGACACCCAGGAACAGCTCAAATTACAGTCGACAAGTTTTGATGGATACATATTACCCCCGTGCAAAGTGGAATTGCAACAACAAATTCTGAGGGCTATTTATATTTCCAGTGTGTGGTGTAATGCACACTTCCAACACTCGACGTTGCTATCTCCTGCCGATTGTGGATGgaaagaagctaataataagctGAAGTTCTTATTGTTTGAGGGTGACCAGTTACCAACTTCAATCAGTGACATAATTATGGATAAAATTGCTGAAACCGACGAcgcagGAATGTACACCATGCGTCTGTTAGACAGTAACACTGGTATAAGTGGTGCAAGTGGTGTCACACCAATGTCTAAAAATGACATGGAACGGGCAGATACGTCAAGTGATAGTGCAGTCAGCTCTATGGGTTCTGAAAGGGTACCATCTCTATCGGATGGGGAATGGTGTGATGGAGGATCTGATTCAGGACATACGACTGCAGAGCATTACGTCACTGATTATCAAAACAAAATTCGGCCATACGACTATAGTCAGTCAAGCCGACATTTAAATGAAGGCATAGGAAGCTCAGAGTCTGCACGTTTGCCACCAGTGGCACAGAAAAAACATCAAATGTTTGGGAAAAGATATTTCCAAGATCAAAGTACAGCTAGTGCAGCACATTCTCCCCAAACACctttaaaatatgaatacagAGACACCGCCACAGCCTCTTATGTTGCTAATCAACCAGAAGGTGCCGTGGGTCCACGAATACCTGAAATGAAGTACTCGTGCTCGATGGAATTTGGGCTTCAAAGTCACATAGCGAGGAATTCAAAAGTTCGGGGGGCAATGCAGAGGCCTGTTTCAAGGGATAAATCAAAGCAACGCAAGTCAGAGGATGAGCACTTGACTAGAGACGAAAAACGAGCAAGAGCTCTTAATGTTCCTATTTCAGTTGACGATATAATCAATTTGCCGATGGACGAATTCAACGAGCGCTTAtctaaatatgatttaagtgAGGCACAGTTGAGTCTCATAAGAGACATTCGAAGAAGAGGCAAAAATAAAGTTGCGGCCCAAAATTGTAGAAAGCGTAAACTTGATCAAATCCTAAGTTTAGCTGACGAAGTCAAGGAAATGAGAGACAGGAAACTTAGACTTATAAATGATCACGAATTTTCTGTTAACGAGTGCAAACGTATGAAAGACAAGTATCAACAACTATACAGACACGTCTTTCAGAATTTACGTGATTCTGATGGCAATCAATATTCTCCTTACCAATACAGTTTGCAGACGACAGCAGATGGATCAATTTTGATGGTCCCTCGTTCAAATTCTACAGTATCAAATCCTGACCGAAAGGATCTTCCACAGAATCAGAAGGATTAA
- Protein Sequence
- MSNVNEVRLATFKKAYKFKDTQEQLKLQSTSFDGYILPPCKVELQQQILRAIYISSVWCNAHFQHSTLLSPADCGWKEANNKLKFLLFEGDQLPTSISDIIMDKIAETDDAGMYTMRLLDSNTGISGASGVTPMSKNDMERADTSSDSAVSSMGSERVPSLSDGEWCDGGSDSGHTTAEHYVTDYQNKIRPYDYSQSSRHLNEGIGSSESARLPPVAQKKHQMFGKRYFQDQSTASAAHSPQTPLKYEYRDTATASYVANQPEGAVGPRIPEMKYSCSMEFGLQSHIARNSKVRGAMQRPVSRDKSKQRKSEDEHLTRDEKRARALNVPISVDDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVKEMRDRKLRLINDHEFSVNECKRMKDKYQQLYRHVFQNLRDSDGNQYSPYQYSLQTTADGSILMVPRSNSTVSNPDRKDLPQNQKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -