Rbic030251.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- nfil3
- Assembly
- GCA_029963845.1
- Location
- JANEYF010002501.1:5684549-5685730[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-15 1.3e-11 46.4 1.9 2 60 75 133 74 137 0.93 2 2 0.0036 15 7.8 0.2 38 62 359 383 335 385 0.67
Sequence Information
- Coding Sequence
- ATGGTTGCCGAATTTGTAGGACGCGGTCAAAGTGGTTCCCCTGTAAATGGTGAAATCCCGCATCTAAATTCAAATATGCCAGCTTCTCACGACCGAGAGATGTTATCTGGATCGTCCACTCCTGGGGAGGACTATAATCCCAATTACAATATGTCAAGTGTAAAACACAAAGAATTATTTTCCACGCGCAAGCAACGGGAATTTACACCTGATAACAAAAAGGATGACAGCTACTGGGATCGACGACGTAGAAACAATGAAGCAGCTAAACGGTCTAGAGAAAAACGGCGGTTTAACGATATGGTGTTGGAACAACGTGTAATTGAACTGACAAAAGAAAATGCTGTTTTAAAAGCTCAATTAGAGGCGATCAAGGAAGAGTACGGGATCTATGGAGAGAATGTTGTCTGCGTAGAAAAAGTTCTTGCAAATTTACCAACCAATGAACAAGTCCTCAGTCTAAATaaaagacagaaaatttctcaCCCACCTACTCCTTTAATGTTTGGGTCTCAGAGTCCTATTCCTACACCAGTGATACACCAGCCTGTCATGGGATCTCCTCCACCACAACCAATGCAACATGCACACAATATGCTACATCCTCCACCTTCACATTTGGAACCTCCTTACAGAGAACACTCTGATTATCATTCTTACCCATTTTCATACCATTCAGCTATCCACTACGACTCAAATAATGCACTGAACTTGTCACGATCTCGCTCCAGGGTCCAATCTCCTTTCGAGGTGTCCAGCAATTCTGGAGATGAAAGCGTACCCGTTGCTCTCACGACAAATGAGGCCAATAACAGTTTACCATTAAAACTAAGGCATAAATCACATCTTGGTGACAAAGACGCCGCGAGTGCATTACTTTCCCTGCAAAACATCAAACAGGAGCCGGGACCACGTGCTAGTCCTCCATGGGATGGAGAGGGTTCCAGCGACGAACGAGACTCCGGCATTTCTTTGGGGGCCGAGTGGTCCGCCGCGGCCACGGCTGCTGCAACTCTCCAGACCCTTCAGAAACAATCCCAACTACAAGCTATGCAAGATGTCGCGGATGGTGACACATCCGCTAAACACAGACTGCATTCAGAAATCGTTCGACTTTCCTCCGAAGTGGAACATCTAAAGTCAATGATGACCCGTAAAGATAAAGGAGCTCCCCAGCATTAG
- Protein Sequence
- MVAEFVGRGQSGSPVNGEIPHLNSNMPASHDREMLSGSSTPGEDYNPNYNMSSVKHKELFSTRKQREFTPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVIELTKENAVLKAQLEAIKEEYGIYGENVVCVEKVLANLPTNEQVLSLNKRQKISHPPTPLMFGSQSPIPTPVIHQPVMGSPPPQPMQHAHNMLHPPPSHLEPPYREHSDYHSYPFSYHSAIHYDSNNALNLSRSRSRVQSPFEVSSNSGDESVPVALTTNEANNSLPLKLRHKSHLGDKDAASALLSLQNIKQEPGPRASPPWDGEGSSDERDSGISLGAEWSAAATAAATLQTLQKQSQLQAMQDVADGDTSAKHRLHSEIVRLSSEVEHLKSMMTRKDKGAPQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056290;
- 90% Identity
- iTF_01289488;
- 80% Identity
- -