Rgig025544.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- grn
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000093.1:7475729-7483745[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-20 2.6e-16 59.7 4.7 1 35 179 212 179 213 0.98
Sequence Information
- Coding Sequence
- ATGTCATCGAGTCAAGTCTGTCGGCCGCATTTTCATGCCCCTCTGCACCCGTGGTTATCCGATGGAGCGAAACCGCTGGCACACTCGGGTCCCTGGGTTCCCTTCGGCGGCGGCGATCCGGATAAGTCGCAATCGCCGTCCTCGGGCTCGACGCAACCGCCAAACTTATTTTCTTTTCCACCTACGCCGCCAAAGGACAGCACTCCCGATTCGGTGGTACCGTCCGGCGGCGCCGAATACCAAAGCGCGGTGGCGGCGGCGATGGGCGCCTTCATGCACGACAACCAACAGAGCTGCGCCCTGGACGTGAAACCCTCGGCGGTGACAAACAAACAACGCGAAGGTAGTGAATATGAAGGGGCCTCCTCCGGCATGTTTAATGGTAACTTTGAAAGCTCGTACGGCTCTGCGTATGGCCACGGTATTCACGGGGCTGCGTATTCGCCCCAGGCTAAGCAGAATTTGGTGACACAGAACGCGCAGTCACCCAACAAACCTCGCAACAAGTCGAGAACCAGCGCCGAGGGCAGAGAATGCGTCAATTGCGGGGCGACGAGTACACCTCTATGGCGCCGCGACGGCACCGGACACTATCTTTGCAACGCCTGCGGATTATATTACAAGATGAACGGACAGAACAGGCCGCTCATCAAGCCTAAAAGAAGACTGACCGTAGGCGCTAATACCGGCAGAACACATCAATAA
- Protein Sequence
- MSSSQVCRPHFHAPLHPWLSDGAKPLAHSGPWVPFGGGDPDKSQSPSSGSTQPPNLFSFPPTPPKDSTPDSVVPSGGAEYQSAVAAAMGAFMHDNQQSCALDVKPSAVTNKQREGSEYEGASSGMFNGNFESSYGSAYGHGIHGAAYSPQAKQNLVTQNAQSPNKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTVGANTGRTHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00021016;
- 90% Identity
- iTF_00003443; iTF_00423415; iTF_00272120; iTF_00951457; iTF_00269413; iTF_01294634; iTF_00273280;
- 80% Identity
- -