Basic Information

Insect: Rhagophthalmus giganteus
Gene Symbol: HINFP_1
Assembly: GCA_036326145.1
Location: JARFJA010000002.1:900055-906530[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 13 7.3 0.0 2 23 80 103 79 103 0.93

2 10 1.5 1.4e+02 4.0 0.4 2 23 115 138 114 138 0.92

3 10 0.027 2.6 9.5 0.9 1 23 175 199 175 199 0.96

4 10 0.00025 0.023 15.9 0.3 3 23 212 234 210 234 0.90

5 10 0.013 1.2 10.5 0.2 3 21 242 260 240 261 0.93

6 10 1.4e-05 0.0013 19.8 1.2 1 23 270 292 270 292 0.99

7 10 0.00013 0.012 16.8 1.9 1 23 296 319 296 319 0.98

8 10 0.0023 0.21 12.9 4.1 2 23 326 347 325 347 0.97

9 10 0.011 1 10.8 4.8 1 23 353 376 353 376 0.96

10 10 0.65 61 5.2 5.7 1 23 384 407 384 407 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	13	7.3	0.0	2	23	80	103	79	103	0.93
2	10	1.5	1.4e+02	4.0	0.4	2	23	115	138	114	138	0.92
3	10	0.027	2.6	9.5	0.9	1	23	175	199	175	199	0.96
4	10	0.00025	0.023	15.9	0.3	3	23	212	234	210	234	0.90
5	10	0.013	1.2	10.5	0.2	3	21	242	260	240	261	0.93
6	10	1.4e-05	0.0013	19.8	1.2	1	23	270	292	270	292	0.99
7	10	0.00013	0.012	16.8	1.9	1	23	296	319	296	319	0.98
8	10	0.0023	0.21	12.9	4.1	2	23	326	347	325	347	0.97
9	10	0.011	1	10.8	4.8	1	23	353	376	353	376	0.96
10	10	0.65	61	5.2	5.7	1	23	384	407	384	407	0.96

Sequence Information

Coding Sequence: ATGTCGGATACAGTTGATTCGGGAgaaaaacaagtaaaaaacAGATTGGCAGTTTTCGAACAACTACAGTGTAAGGAGAAAAAGTGGagtagtaaaaattttacttacaaaCGAGAAAATCTTAAGCGGTCCTTGTCGCCTTCTTCAGACACCGAGTTAGTTATTGATGACGAGGATTACACCTGCCCGAAAAAAAGGAACAAAGCTGTTCGACTACTAGAAGAGCCATTAAAATTGGTTTGCGATTGGATGGAGTGCCTTATCGTTTTTAACGActacagaaattttatatatcACATAATCGAGCACGTTCCGGAAACAGACGAGGAGCTGGAggatttaaaatgcaaatggGAAGAATGTGTTTACGTAGCCCCAAGCTCGGAGTTACTAAAGCAACATGCATGTTTTCATGGTTATCAcgctaaattaaaaaatatagggaaCAACGCTTTGGATAGAATAAAGCTTCCCAAATGTAACCAACCAAATACATTTTCGCTTCTGTTATCTTTAAGCGGCTTCGACTGCAATTGGTCCGATTGTGGAGCATGTTTGCCAAATGTGTACGAGTATCACGAACATATGCGTTTACATATTAATGCCAATCCCAAACGAGGCGAATCGATACCCTGTCTATGGATGGGTTGCACGTACAAATTTTCTacacaatataaattaatggaTCACATAAGGTCGCACACGAAGGAACGAGTTATCGCCTGTCCAACTTGTGGCGGTACATTTGcgacgaaaacaaaattttacgacCATCGAAAAAGACAATTATCTATTGATTTGCAAAACTATCAGTGCTCGCAATGCTCGAAGTTGTTTCCCACCGAACGACTCCTGAGAGACCACATGAGATCTCACATTAACCATTACAAATGCACGATGTGCGACATGACTTGTACAAAGCCGTCTGTTTTGGCTACGCACATTCGAAATCGACATTTGGAGGATCGGCCCTTGAAATGCCAATATTGCGAACATTCTTGCGTAACGAAACAATCTTTAGAGTTGCATTTATTAACGCACTATCCGGAACAACTGTTTTCCTGTGAAGAATGTGACTATTTATGTCGTTCCCAATCAACTCTCGACCGACACTATCACAAGATTCACGGAcagGGCTGGCCTAAATCGTATGAGTGTCACTGTTGTCAGAAACGTTTTTCAATCGGCAACAAACttacaaaacatttaattaaacagcATAATTTGTATTGGCCTTCGGGCCACTCGCGGTTCAGgtatAAGGAAGACGCAGACGGGTTGTACCGATTGCAGACAGTTCGTTACGAGAGTATCGAGGTAACTCAAGAAATgatacgtaaaaataataaccagCAGCTTCCCAAGGCGGGCTTAAATATGCTTAAGTATCAGTTAAAAAAGACTGAAGAAGTGCCCAATAAGCCGCCGAATTATGTATTAATGGTGACCGAGAATGGCGATCAAAACGTTGCATATCCTACGAACAATAGTATCGTTATGACAATAAACGACGTAGACGAAAGCGGCAACATCGTAAATTCTGAAACGTTGCAATCGAACGAAATGAAAATTGTCGATTCAAATGCCACAGGGGAAGAACCGAGACGTTTACGACCGAGGAAGCcgaagaaataa
Protein Sequence: MSDTVDSGEKQVKNRLAVFEQLQCKEKKWSSKNFTYKRENLKRSLSPSSDTELVIDDEDYTCPKKRNKAVRLLEEPLKLVCDWMECLIVFNDYRNFIYHIIEHVPETDEELEDLKCKWEECVYVAPSSELLKQHACFHGYHAKLKNIGNNALDRIKLPKCNQPNTFSLLLSLSGFDCNWSDCGACLPNVYEYHEHMRLHINANPKRGESIPCLWMGCTYKFSTQYKLMDHIRSHTKERVIACPTCGGTFATKTKFYDHRKRQLSIDLQNYQCSQCSKLFPTERLLRDHMRSHINHYKCTMCDMTCTKPSVLATHIRNRHLEDRPLKCQYCEHSCVTKQSLELHLLTHYPEQLFSCEECDYLCRSQSTLDRHYHKIHGQGWPKSYECHCCQKRFSIGNKLTKHLIKQHNLYWPSGHSRFRYKEDADGLYRLQTVRYESIEVTQEMIRKNNNQQLPKAGLNMLKYQLKKTEEVPNKPPNYVLMVTENGDQNVAYPTNNSIVMTINDVDESGNIVNSETLQSNEMKIVDSNATGEEPRRLRPRKPKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -