Basic Information

Insect: Rhagophthalmus giganteus
Gene Symbol: znf711
Assembly: GCA_036326145.1
Location: JARFJA010000019.1:4654790-4657473[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0084 0.79 11.1 0.2 1 20 43 62 43 64 0.93

2 18 7.1 6.6e+02 1.9 0.5 1 23 70 92 70 92 0.78

3 18 0.72 67 5.0 0.5 3 23 100 120 98 120 0.94

4 18 0.002 0.19 13.0 0.7 1 23 126 148 126 148 0.97

5 18 9.8e-05 0.0091 17.2 3.9 1 23 154 177 154 177 0.97

6 18 2.4e-06 0.00022 22.3 1.7 2 23 189 211 189 211 0.97

7 18 0.0002 0.018 16.2 0.7 2 23 220 241 219 241 0.98

8 18 0.76 71 5.0 0.1 1 9 247 255 247 258 0.89

9 18 7e-05 0.0065 17.6 1.9 2 23 289 310 288 310 0.96

10 18 1.4 1.3e+02 4.1 2.1 1 23 356 378 356 378 0.87

11 18 0.032 3 9.3 2.9 1 23 384 407 384 407 0.98

12 18 0.02 1.8 9.9 1.7 1 23 413 435 413 435 0.91

13 18 0.00021 0.019 16.2 2.5 1 23 441 464 441 464 0.96

14 18 3.6e-07 3.4e-05 24.8 2.0 2 23 476 497 475 497 0.98

15 18 1.8e-05 0.0017 19.5 0.7 3 23 512 532 510 532 0.96

16 18 2.8e-05 0.0026 18.9 0.7 1 23 538 560 538 560 0.98

17 18 2.8e-06 0.00026 22.1 0.4 1 23 566 588 566 588 0.99

18 18 0.062 5.8 8.4 0.9 1 21 594 614 594 615 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0084	0.79	11.1	0.2	1	20	43	62	43	64	0.93
2	18	7.1	6.6e+02	1.9	0.5	1	23	70	92	70	92	0.78
3	18	0.72	67	5.0	0.5	3	23	100	120	98	120	0.94
4	18	0.002	0.19	13.0	0.7	1	23	126	148	126	148	0.97
5	18	9.8e-05	0.0091	17.2	3.9	1	23	154	177	154	177	0.97
6	18	2.4e-06	0.00022	22.3	1.7	2	23	189	211	189	211	0.97
7	18	0.0002	0.018	16.2	0.7	2	23	220	241	219	241	0.98
8	18	0.76	71	5.0	0.1	1	9	247	255	247	258	0.89
9	18	7e-05	0.0065	17.6	1.9	2	23	289	310	288	310	0.96
10	18	1.4	1.3e+02	4.1	2.1	1	23	356	378	356	378	0.87
11	18	0.032	3	9.3	2.9	1	23	384	407	384	407	0.98
12	18	0.02	1.8	9.9	1.7	1	23	413	435	413	435	0.91
13	18	0.00021	0.019	16.2	2.5	1	23	441	464	441	464	0.96
14	18	3.6e-07	3.4e-05	24.8	2.0	2	23	476	497	475	497	0.98
15	18	1.8e-05	0.0017	19.5	0.7	3	23	512	532	510	532	0.96
16	18	2.8e-05	0.0026	18.9	0.7	1	23	538	560	538	560	0.98
17	18	2.8e-06	0.00026	22.1	0.4	1	23	566	588	566	588	0.99
18	18	0.062	5.8	8.4	0.9	1	21	594	614	594	615	0.94

Sequence Information

Coding Sequence: ATGCACATAAGACCATCTAACAATTGCAAAAGGGCGAGGTTCCTATTTTATGGACAACTGGCGTTATTCGTGCCGAAGAACGCGCGCAGCAGAACGAACGGCGAGTCTCCGAACATCCAGGAAGTCTTCGCGTGCGATCTGTGCGACCTCACGTTCAAAACCGGCGGAAAATTGAACAACCACAAAACGCTATACGGCGATCACAACTTCAACTGCGAAGTCTGCAAGTTGACGTTGAAGAAGCCAATCGATTACGCTTTTCACTCGAGGGAGCACTCGAAAGCGAACAAGTTCTGGTGTCCCCTGTGCGAGTTCAAGACTCTCTCCAAGTCATCCGTGAAGATACATATTCAACGTCACGAACacgattataaatatatgtgcGAGTTGTGCAAGAAGGGCTTCGTTAACAAGAGCATTTATTCGGAACATATGGAGAAACATTCCGGGACGAAACGGTTCGAGTGCGATATCTGCAACAAGACGTTTCAGCACAGGCGCTATCTGAGCGTGCATCGCAAAATGAACCACAAGAAAATTTTGGAAGGCATGGCGGACGTCAACGAGTGCGGCCAGTGCGGACGCACGTTCTCGTTTAAGACGAGCCTCCGACGACACTTGAGAAAAATCCACGGCATCGGCAAAGACGACAGCGTCCGATGTCCGATTTGCTCGAAGAAAATTGCCAGCTCGTACAATTTGAAGTTTCACATGCGGACGCACACGGGGGAAAAACCGTTCGCTTGTCACGTTTGCGGCAAGTCAAGCGTCGCGTCGATCGACGACAAAGCTGTAATAAACTACAGCCAGCTCTGCGAAGCGATGATAACGTCGGCGAAACGGCGACGACAAAGGCACATGTGGAACTGCACCAAGTGTAACGAGAAGTTCCCTACATCGAAGATGTTGCGGGAACATCGGAAAACGCACCGCAAAGTCGAAAACGATACGCAGTACAACTACAAGTTCGACCAGAACCGCGACGTCTTCACTTGCATCACGTGCGACGTGGAAAACTCCTCCAAAGACGAAATCGAAAAACACGTTCTGTTGCACGAAGAAAAGTACACGTGCGAAGTTTGCACGGCCAACTTTATAAAACCGTACGAATATTCGTGCCACCTATACAACCACGACACGTCGAAGGGATTTCAATGCCCTTTTTGCAAATACTCGACGCATCGACGTAACGCAATCATGTTGCACATCAACACCTTTCATCTCCGTAAATTCATATACACGTGCACGTTATGCGGCAAAGGCTTCAACGATTGCGTCATATTTAAGGAGCACAGTAACGTGCACAACGGAATCAAGCCGTTCCACTGCGTGGTCTGCAACAAGGAGTTCGCATTTTCCAGCTATTTAACCAACCATCAAATCCGTTATCATAAAGTCACGATTGACGGCATGATCGGCACCAATCAGTGCCCCGTCTGCCGCAAGAGCTTCACCCGAAAGAACGCACTGCAAACTCACATGAAGCGGCACGAGGTCAAGCCCGAGCAGAAGGTGCGCGAAAAAAGGCACCTGTGCGACATCTGCGGGAAAGGCTTCGCTCAGACCGAAAAGCTCAAGATCCACTACCGGGTGCACACGGGCGACAAGCCCTATGCCTGCTCGTACTGCGCCAAAACGTTCACCAAACGGGATTATCTGATAATGCACGAGCGAGTTCATAGCGGAGAGAAGCCGTACAAGTGCGAGTACTGCGGAAAACGCTTCAATCAAGGAGCGCCGCTGAGGTTGCACATTCGGAGCCACACGGGCGAACGGCCCTATCGTTGTCAATTTTGTAATTCCGGATTTATATCGAAAAGCGTgcttaacttgcatttcaagAGTTGCGCCGGTagtctttaa
Protein Sequence: MHIRPSNNCKRARFLFYGQLALFVPKNARSRTNGESPNIQEVFACDLCDLTFKTGGKLNNHKTLYGDHNFNCEVCKLTLKKPIDYAFHSREHSKANKFWCPLCEFKTLSKSSVKIHIQRHEHDYKYMCELCKKGFVNKSIYSEHMEKHSGTKRFECDICNKTFQHRRYLSVHRKMNHKKILEGMADVNECGQCGRTFSFKTSLRRHLRKIHGIGKDDSVRCPICSKKIASSYNLKFHMRTHTGEKPFACHVCGKSSVASIDDKAVINYSQLCEAMITSAKRRRQRHMWNCTKCNEKFPTSKMLREHRKTHRKVENDTQYNYKFDQNRDVFTCITCDVENSSKDEIEKHVLLHEEKYTCEVCTANFIKPYEYSCHLYNHDTSKGFQCPFCKYSTHRRNAIMLHINTFHLRKFIYTCTLCGKGFNDCVIFKEHSNVHNGIKPFHCVVCNKEFAFSSYLTNHQIRYHKVTIDGMIGTNQCPVCRKSFTRKNALQTHMKRHEVKPEQKVREKRHLCDICGKGFAQTEKLKIHYRVHTGDKPYACSYCAKTFTKRDYLIMHERVHSGEKPYKCEYCGKRFNQGAPLRLHIRSHTGERPYRCQFCNSGFISKSVLNLHFKSCAGSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -