Rgig002565.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- Myrf_1
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000001.1:25413179-25420382[-]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.27 4.3e+03 -1.4 0.5 62 107 195 237 185 290 0.54 2 2 7e-16 1.1e-11 46.1 0.1 2 87 376 450 375 452 0.94
Sequence Information
- Coding Sequence
- ATGGAATACTGCTGGAACATGGAGGAACGCAGAGAAATTAAAACGCGTACTTTACAAGGCAGAGGAGATTTCGTGGGAGGTATCGACAACGAAGCTTTGGATTTTTCCCAACTGGAAGCTTTCATTAACAGCGACGGTCCACAGGGAAACGGAACTTACTTCGGGGAATCCCTCAATTCCGCGACGCCAACCACCGGAAAACTTCTCAATGTTATAGTAGAAAATAAACGAACCTCCGGACACTCGTTGCCAGAAAGCCCCCCAGATAGCAGTTCGGAGCATCCCTACAGTCCGCAAGATAGTTGTGATCCCCCCATAAACACGTCGGAAACGATCTATACCACACTCGGACAACCGATCTATAAATCCAACCTTTTAAATCCCATAATTAGCGATAATTTAATTCTCGGTTCCCACATAGTCGTAACAGATTCGAATGCCGATTCTCAGTTGTTAGACAGCGGCGGTATACTTCAAGACAGTCGCATATTAGTAAATGACGACTTGCGTTTGAACGTGCACGGAGACTCCAACCTTCTCCACGACAGAATACTATTGTCCAACTCCAATATCCCGGAGAACAATCAACAAATTCTGATTCACAGTAATTCCGATTCTAATCAGAATTACGCAGACCCTCATGCCGAAACTAGAAGGACCGCCAACGATCTTTTACTGGTCAAAAATGGAAACGACTACGATAAATCGCAGTTGGTACATTTGGGTTTCAATTCAAACATCGAGATGCAGTTGCCACAACGGCAGAATATCGAGAACGTGATCTGCGAGAACAGCATCGATAACATTCAGGCGGTTTATACGAATCTCCAAAACgccccgaagaagaggaaattGTCGCAGGACGTTCCTTTAGTTAAAAGCGAACCCGaGCACTGTTCGCCCGGTCAGTTAAGTCCGCCCAGTGCCCTTTCCACTTCTATCGATGACGACTTCGCGGGTTCGGAAGGATGCCTATCGGAAGCTCAGTATCAGTGCATTAGATTTTCGGCATTCCAACAGAACGCCTGGCACATGCTCTGCGATCAAAATCTCACTGAAATCCCGGTACCACATTATCGAGTGGATGCAGACAAAGGTTTCAACTTTTCAAATGCGGACGACGCCTTCGTTTGCCAAAAGAAAAACCATTTTCAGATAACCTGTCACATACAACTATTAGGCGACGCACGATTTGTGAAAACCACCGAAGGctttcacaaaatttcaagctTCCACTTACACTTCTACGGCGTAAAGTACGACTGTCCCACGCAGACCATTCGGGTCGAACAAAGCCAGAGCGATCGTAGCAAAAAGCCATTTCATCCGGTGCTGGTTGAACTAATAGATTCGCAGTAA
- Protein Sequence
- MEYCWNMEERREIKTRTLQGRGDFVGGIDNEALDFSQLEAFINSDGPQGNGTYFGESLNSATPTTGKLLNVIVENKRTSGHSLPESPPDSSSEHPYSPQDSCDPPINTSETIYTTLGQPIYKSNLLNPIISDNLILGSHIVVTDSNADSQLLDSGGILQDSRILVNDDLRLNVHGDSNLLHDRILLSNSNIPENNQQILIHSNSDSNQNYADPHAETRRTANDLLLVKNGNDYDKSQLVHLGFNSNIEMQLPQRQNIENVICENSIDNIQAVYTNLQNAPKKRKLSQDVPLVKSEPEHCSPGQLSPPSALSTSIDDDFAGSEGCLSEAQYQCIRFSAFQQNAWHMLCDQNLTEIPVPHYRVDADKGFNFSNADDAFVCQKKNHFQITCHIQLLGDARFVKTTEGFHKISSFHLHFYGVKYDCPTQTIRVEQSQSDRSKKPFHPVLVELIDSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -