Rgig018790.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- -
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000067.1:580186-581859[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-05 0.081 13.9 0.3 3 44 39 94 38 96 0.87 2 3 0.00039 0.63 11.0 0.0 1 21 170 192 170 195 0.90 3 3 0.0019 3 8.8 0.1 2 45 307 362 306 363 0.84
Sequence Information
- Coding Sequence
- ATGGCGGAGGTTGTCGAACAAGATAGCATAAGAAATCCCGAGTTAATCCGTTTATTGCAGTCAAGTAATAAATCTGAATccgaaactaataaaaatccAGATTCTATTTATTCCGAATGGACAACAGAAGAAACAAATTGCCTTCTTAGATTAATAAAggaatataattattttccacaaattaaatttgacaaCGACCAGCTATACacgaaattatcaaaattaatgacTATCAGTGGATACAAAAGGGTGAataaggaaataaaaaattattggaaaGAGCTTCAACAAAAATATGAAGATTACGAAGAGGGAAAATTAGAACGGTTCGAATATTTGGATCAAGTGAGTGGGTTATTCCATTTAAATTCGAGTTCTCATTCTGAATCCGATATAATAGTAATTAAAGGTGAAGAATTAGAAAGTAACGTTTTAGATTCTCCTTATTCTTTTCAAAGCGTCTTTAATTGCCAcgattatcaattaaaaaacgGTAAAGTAGTCAAAAGAAATAACTGGACCCATAAAGAAACCGAATGCGTTGTGGAAGTATTAGAAAAGTATGGGATGCCGAACCGTACCAATTTGAGAAAATTCTGCTTCGTTATAGTGGACTATCTTAAACAACATGGGTTTATGAGGAGCGAAGAACAAGcacaaatcaaaataaaacatttacgcGCTTTATACAATCGAGTTTTACGCAAAACCATTAAGGAAGAAGAATTTCTCTTTTTTAAGAGAATCCAAGAATTAATGCAAGTGCATCATcaagaaactaaaataaaagaaaatgaagaaacccaaaattatatttctttaGATGAACAATCAAAATCGGACACGGAAGATGGAACCGAAACAGATTTTGGTGAAGTTGTCAATGATGAAAGCGATATGTGCTACAAAAAAACCAGACAAATATGGACTAATAAAGAAATTTctgttcttttaaaattcatagAAGCTAATGGAATTGTCACGGGTAAACAATTGCGAAAAATTTGTAACAAGGCCGTAGATCACCTAGCATCTCATGGATATTATCGTACTCCTACACAAATATTAATTCGTTGGAAAAATGCTAAAGCCTTATATTGGGCAACGTACCGGAAAAAAGCAAAATCTCCCGAAAAGGAATGTAGTTTCTTTTATCAGTTACATTCTATTTTAAACCCCAAAGATTGCTTCTATGACCCGAAGCATTTTGAAATAGAAAGCAATGAAGACGATACTAATTTTTACCAGATAGAATCTATTTCTGAATTACCTAGTCTTAATTTCAAGCAGACCAGCCATGGACAGTcagtttgtaattttaaaaaagaaaacgcgaATAATTTGAACAATTCAAATTCTAGCGATAACTTTATTACCGTTCCTAATGTTTCATCTAGTAAACGTTTTCAGATACCTGAACTACCCATAGATCCCTTAGAAAACGATGAAACCCTTAAGATTTCATCATCTAGTCCTAAACGAAGTCGTACAGAACAAGGCGATTCTATTCGTAGTAATAACTGTTGTTCATTTTGTAGTTCATTAGATCATGTCGATCATTATTGTATTTCTTTAGCTCATAGTATTAAGAAATTAGATGCAAGAAGAcaagcaaaattaaaaatagaaatacagCAGTTAATGTACAAAGCAGAATTCGAttctgatttttaa
- Protein Sequence
- MAEVVEQDSIRNPELIRLLQSSNKSESETNKNPDSIYSEWTTEETNCLLRLIKEYNYFPQIKFDNDQLYTKLSKLMTISGYKRVNKEIKNYWKELQQKYEDYEEGKLERFEYLDQVSGLFHLNSSSHSESDIIVIKGEELESNVLDSPYSFQSVFNCHDYQLKNGKVVKRNNWTHKETECVVEVLEKYGMPNRTNLRKFCFVIVDYLKQHGFMRSEEQAQIKIKHLRALYNRVLRKTIKEEEFLFFKRIQELMQVHHQETKIKENEETQNYISLDEQSKSDTEDGTETDFGEVVNDESDMCYKKTRQIWTNKEISVLLKFIEANGIVTGKQLRKICNKAVDHLASHGYYRTPTQILIRWKNAKALYWATYRKKAKSPEKECSFFYQLHSILNPKDCFYDPKHFEIESNEDDTNFYQIESISELPSLNFKQTSHGQSVCNFKKENANNLNNSNSSDNFITVPNVSSSKRFQIPELPIDPLENDETLKISSSSPKRSRTEQGDSIRSNNCCSFCSSLDHVDHYCISLAHSIKKLDARRQAKLKIEIQQLMYKAEFDSDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -