Rgig004811.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- DNAJC1
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000001.1:56706975-56708427[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-06 0.0075 17.2 0.0 2 38 272 311 271 313 0.89 2 2 1e-10 1.6e-07 32.1 0.1 3 45 355 401 353 402 0.92
Sequence Information
- Coding Sequence
- atgaaatttatttctactagtttgtttcttttaatcAATTGTAACTGTGTATTATCGTGGGATTCACAACAATTGGAAGTTTTTGATGCAGTGGAAGAAgtaaaagtgaatttttacgattttttaactGTAGCcaaaGATGCCGACttgcaaaaaattaaaggcGCTTTTCGTAAGTTATCCTTAGAACTACATCCAGATAAGAATTCAGCTGAAAATGCCGAAGAACAATTTCGTCATTTAGTAACAGTATACGAAGTTCTTAAAGATTCtacaaaacgaaaatattatGATGAAGTATTGATTAACGGTCTTCCTAATTGGCGATCGGccgtttattattatcgacATGTACGACGAATAGGATTGCTTGAATTATgtcttttcttatttgtacTTATATCTATTGGTCAATATTTAGTTGGATGGGCTTCATATTTTGAACGTAAATATACTTTGGAACAAGTGAAAggtcgaaaacaaaaaaaacttgtaTCTACTATAGAAATTCCAAAACCATCTGTGATCAATACTCTTCCGGTGCAAATCCCTTGTCTTATATGGGCAACCTTTTTATCTTTACCATGGATGTTGagttttttaaaacagaaaGCAATGGAAAAGTTGGAAGAAGAGATAAATGAAAGTAGTGAAGAAGAACCTATACGAGAAGTTCGAACTGCACGCAAACGTAAACTTGGTTTTGTAGTCCCAGATGGGCCTACATTTGAACCACAATTGTTAactacaaaagaaaataaattattagaaaatcgcccaattaaacaaaatcaaGTTGCTCCCGTTGCAGGTGGTTTATGGACAGATGAAAATCTGGCAGAACTTGTACAACTTATAAGTCGCTATCCTGGTGGTACTCATAATCGTTGGGAATTAATAGCAGAGAATATTGGTCGTTCTGTATCTGAAGTTACATATAtgaataataaactaaagagTAATGGCTATCGTGTGTCATTGCAAGAACCAGAAGTAGAATGTTTACgagtaaaaaagaaaacaaaagcaGGAAAATTAGATGTAATAACTGAAAATTCGCCAGTATGGAATCAGGAGCAACAGAAAGCTATGGAAAATGCCCTAGCTAAATATCCTAAAGGTTATATTGATCGGTGGGATCACGTTGCTGAATATGTACCTGGAAAATCAAAGgAACAATGTATATTGCGGTATAGACAATTGGTTGAATTAGTGAAAAggcaaaaagaaaataaaattcaagatgTACCACCAAACAACAtagaaattaatgttttttcataa
- Protein Sequence
- MKFISTSLFLLINCNCVLSWDSQQLEVFDAVEEVKVNFYDFLTVAKDADLQKIKGAFRKLSLELHPDKNSAENAEEQFRHLVTVYEVLKDSTKRKYYDEVLINGLPNWRSAVYYYRHVRRIGLLELCLFLFVLISIGQYLVGWASYFERKYTLEQVKGRKQKKLVSTIEIPKPSVINTLPVQIPCLIWATFLSLPWMLSFLKQKAMEKLEEEINESSEEEPIREVRTARKRKLGFVVPDGPTFEPQLLTTKENKLLENRPIKQNQVAPVAGGLWTDENLAELVQLISRYPGGTHNRWELIAENIGRSVSEVTYMNNKLKSNGYRVSLQEPEVECLRVKKKTKAGKLDVITENSPVWNQEQQKAMENALAKYPKGYIDRWDHVAEYVPGKSKEQCILRYRQLVELVKRQKENKIQDVPPNNIEINVFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -