Rgig011554.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- rcor2
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000036.1:1420102-1426527[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-09 3.5e-06 27.8 0.0 3 46 130 173 128 173 0.97 2 2 1e-14 1.6e-11 44.9 0.0 3 46 376 419 374 419 0.97
Sequence Information
- Coding Sequence
- ATGGTATTGGCCGCAAAAAATGGAGAAGACACCCGAAACGGTCGGAGGAGTCGGGGGCCGAGCCCCAATGGACACGTTCAGACAGAATCAAGCGACGACGAGAGTCCAGTTCCTACGGATAAGATACGCGTAGGCCGCGACTACCAGGCAGTTTGTCCGGAATTAACGCCAGAAAATCTTCGGAAACCCGAACTCTTGGCCGATAGGGCTCTTTTGGTTTGGTCTCCGACAACGGATATACCTGATTCAAAATTAGAAGATTATATAATGCTAGCAAAAGACAAATATGGATACAACGGAGAGCAAGCTTTGGGCATGTTATTTTGGCACAAACACGATCTCGATAGGGCAGTATTAgatttagcaaattttacacCATTTCCCGATGAATGGTCGGTCGAAGATAAAGTATTGTTCGAGCAGGCCTTTCAGTTTCACGGTAAAAGTTTTCATCGTATCCGACAAATGTTACCCGAGAAGACGATAGCTAGTTTGGTTAAGTATTATTACAGTTGGAAAAAGATTCGTTCGCGAACTAGCCAAATGGATAAACAGGCACGAAAATTGGCGACGCCGCGAGAGGACGGTACTCCGTCGGAGGCCGGTTCGGAAGGCGGATCGAACGAAGACTCGGATCACGACGAGAAGAAGTGGACAATACACCGTGGCATAAGGCGCAAGAGTGACACACCGCCACGTTCTAGAACAAAAGACGAAAATGGAAATCAGGGTGAAGGTGGTGCGTGTTCTAACTGCGGAGTCAACTGTACAGTCACGCACGTGACGCCGAAGGGCACTTTGTGCACGTCCTGTTTCCAACACTGGAGACGTACGGGAATGTTAAGGCCTACTTCAGGCCCACCTGGAGGCAAACGCGGCGCCCCCTTGGGGGCAAGGCACAAGCGCAAGCCACCTCGTGGCATGTACATCAATCACGATGACCTGGCGGCAATGGCATCGGGTGCAGCTGGATTGGTGATGCTTAAGGCGATGGATAGAGAATTGGAGGCGCTGCATCGTCAAATTCAGCAGAATAAACAGGTAGTGAGTTCCTTGAAACGTAAGCATTCAGAGTCACTCGAAGATCTCCGTCCTAACAGCGATAATTCGTCGCGCATCAATTCGAGATGGTCTAACGAAGAATTGCTACTTGCTGTTCAAGGAGTGCGTAAATACGGTAAGGATTTCAAGAGCATCGCGGAGGTGTTAGGTAACAAAACTGAACATCACGTGCGcagtttttttgttaattatcgTAAGAGGTTTAATTTGGATATGGTACTTAAAGAATATGAGAGGGATAACGGCCCGATTGTGGTCGACGATAATGGAGACGAAAAGGTGGTGTTAGAAGACAGTATTGATAATAATTCTTCCAATGACGTTATTTGTCTTTCTCCCACACCACCCATTAAAAAggactttaaaaacaaaattgcagTCGCTCAAGCCAGCAAATGA
- Protein Sequence
- MVLAAKNGEDTRNGRRSRGPSPNGHVQTESSDDESPVPTDKIRVGRDYQAVCPELTPENLRKPELLADRALLVWSPTTDIPDSKLEDYIMLAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPEKTIASLVKYYYSWKKIRSRTSQMDKQARKLATPREDGTPSEAGSEGGSNEDSDHDEKKWTIHRGIRRKSDTPPRSRTKDENGNQGEGGACSNCGVNCTVTHVTPKGTLCTSCFQHWRRTGMLRPTSGPPGGKRGAPLGARHKRKPPRGMYINHDDLAAMASGAAGLVMLKAMDRELEALHRQIQQNKQVVSSLKRKHSESLEDLRPNSDNSSRINSRWSNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVRSFFVNYRKRFNLDMVLKEYERDNGPIVVDDNGDEKVVLEDSIDNNSSNDVICLSPTPPIKKDFKNKIAVAQASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00271049;
- 90% Identity
- iTF_00153094;
- 80% Identity
- -