Rgig016480.2
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000055.1:390833-402965[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-17 8.2e-15 55.0 0.1 1 45 288 333 288 333 0.96 2 2 2.3e-17 3e-15 56.5 0.0 1 43 649 692 649 694 0.95
Sequence Information
- Coding Sequence
- ATGTACGAAGACGTTCACACAATAAACGTTAGTAGACGTTACTCTCGTTCGACCGGGTTGGAAAGGATCGCTGAGGAGTTGATGGGTCGGAGGAAATGGAAACTGTATCAAGAATCCATGTCCAGAAATTATCTGCAGCCGATAAACAACAACGTGGAGAAGATCCGATCGAACGAAGATTATTTAAAGTACGAGCACGATTTTTCCGGTTCCAACCAAAATCGGGAGATAGAAGTGCggtacaaaattataaaagaagaGATAAACGGAGAATACAGAACGAAACAGGAGGACGTAGAAGAACGATTAAAGGACTGGTCGCCACAGAACAagtgttatttttgtgtagaCGGCAAACTGGATAGTGAAAACAACACCGGTCACGGGGCTTTGAGTCCCCGACATTCGGATTCGGAAACGACCGATAGTCACAGCGATAGCGAAGCACCTCCAACCCTTACGCCGTCTACGGGTTTGTTGAACAACAGCCACAACGACATGACGACGATAGAGAGTGTAACGTCCATGGCAGCTTTGGCATCAGCAGTAGCCGCGTTATCGGGGAACTCCCCGGGCGCTCCCACGCCGCCCCTACCGTTCTACCCCCCAAACATAATACCGCCAAATTGGTACCTGGCTAATATGGCGCGAAATTTTCAACCGGAACGAATCGAAGTCGAAAAACCAGGAGAACAACCCTTGGATCTCAGTTCGAAGGCGACGAACAGTAGCAGTAGTCCTGTAGAGAACAAAATGCCCCCCAACATGAGGTTATCGAATTTGgataataacaaacaaattttcaaTTCTGATTTTAGAGCGAAACCTCGAATGTCGGCAATTGCAGGAAGACGCACCTACACCGAAGACGAACTCCAAGCTGCTCTCAGAGACATTCAGTCCGGAAAATTGGGAACTCGACGAGCCGCAGTCATATATGGTATTCCACGATCGACGTTGCGAAACAAAGTTTACAAACTCGCCATGGAACGAGAACGGGAATCGCATCTAAATTCCGCGGCACCACTAAAAATCGACGAGGAAGAAGCGGTCGACGACGACAAGGAATTATCCGGAGccgaagaagaaaaagaggtCGAAAAAGCCCTACAGGGACCTCTGTTATCGATGGCCGACATTTTAAGGTTTTCCAACTTGGAAAATCAAGAAGCCCTGAAAGTCCTCCTACAAAGGGGCAAAAACGGCCCGGAAGGTTTATCTGCACTAGAACACGGCGCTATCGGGCCCTACATACAAAATTTCCTATTAGCATCTGGGACGAACGTCCCgagtttaataaaacatcaaGAAGAAAGAGACGCGGGTTCTCTAACGTTGTTGCCGGAGTTCGTCAAAAGAATGATGGTGGAAGATCAGTTAGTTAAAGACCAATGCCGATATCAACCTAATAACGGCGAGATCGATAAAATAATGCGGACGAGTCCGTCTAATTCCGTCATCGTGAAAATGGAAAAGTGTAAGTCGGAGTCGTCCGACATGGAGACCGACGACTCGCCCTCAAATGTGATACTTAAAATTCCGTCCTTTAAACCGACTACCAGTAAAAATGGTAACGATTTTTACAGAAGTTCTACGGATTCTACGACGATCGTTTCGCCGTCGATAACCAGCGAATCTGGATCGCCGCCCGTCCTTCCCGGACGAGGAATGACGTTAAAAGATGTGAAAGACGTGATCGCAAAGAGCATAAGTCAAAAATTTCAACAGACTCCGGAACCGATCAGAATGCCATCCATCATCGAGATGGATTATAAAAGAACGGGATTTACACCGCCGATGGGGGGCATTCCCCAAATGAAGAACCACCAAGATCTTAACAGACCTTATCAGCATTCTCATCAAAAACTTCCTCAAGCGGTTTCTACCTCCGGTTCGACGGGAGGCAAAGGCACGCGACCAAAGCGAGGCAAATATCGCAATTACGACCGAGATAGTTTAGTAGAAGCGGTGAGGGCCGTACAAAGAGGGGAAATGTCGGTGCACAGAGCGGGCAGTTATTACGGCGTGCCGCATTCCACCTTAGAGTACAAAGTTAAGGAACGGCACTTGATGAGGCCCAGAAAGAGGGATCCTAAGCCGAATCCCGTCGACGAAAAGATAGCCTCCCTGAAACAGAACGACTTGCGCGTCGCCGCCGCGGCCGTCGATAAAATGAAACCCGTCATGCAGCCTCCTCAAGCAAAGTTTCCTCCGACGTCGCCGAACGGAATAAAACTCCCGATTTTCGATCCCGGCATGGCACCTCTCGGATACAACCCCGCCCCCTTTCCGTTTTGGCCGCATCCAGGATTCGGCCACATTCCTTTAGATTACGGTAGAAACCCATCGACTTCGTCGTTTCCACCTAATCCCGAGCAATTTTTCGCTTCGCAGATGATGCAGAAATTACAAGAAGAATCCGTAAGAACGCATCCGAACGTAACGCTTTCTCCAGTTCCCGGAGCGGCGACGGCACTGCCGAAAAGTGCCCGTCAAATCGCGGAGTCGCTTTTGGACGGGACGGGATCGAACGGGTCGTTTTTGGACGGCATCATCCGGTCGAGTCTGGAATCGGGCGTTCCGGGAAGCGAAGATAAAACGATCAAAGACGAGAAAAACATAACGCCAGAGAACATGTCGAATAAAGCGTTGTTAGATCAACTTTGTCGTAATAGTCGTCTCGCGCCCTTATCGAAACCGAACATGCAAGAACCCATCAATCCGGGAGACGAAAATTACAGGAATCCGAGTAGTCCTTTGAACTTTAGTGCCGCCATTTCGAGCGAGGAAACTTCTGCGAACGCGCACTTTTCTGGAGACGTGCTCGATTCGTCTCCCAAGAGATTCGACAATCCGGAAGTTCACACTATCGAGTTATCGAACGATTCCTACGAGTCGACGGAGCGGGACGAAATGGAAGACGAACAAAGAACGACGCCCCCGGGTCGAATATATTTGAAACAAGAACTCGTCAATCCGGAAAATTTGAAACCTGAGATGCTGGTGCGATTTCGCGACGTTCTACAAGACGTAGATCGCAATGGTATCGGGGAATCGGCTACAGGAAGTGCCTCAGAATCGGACGTGGCACAAGACTGA
- Protein Sequence
- MYEDVHTINVSRRYSRSTGLERIAEELMGRRKWKLYQESMSRNYLQPINNNVEKIRSNEDYLKYEHDFSGSNQNREIEVRYKIIKEEINGEYRTKQEDVEERLKDWSPQNKCYFCVDGKLDSENNTGHGALSPRHSDSETTDSHSDSEAPPTLTPSTGLLNNSHNDMTTIESVTSMAALASAVAALSGNSPGAPTPPLPFYPPNIIPPNWYLANMARNFQPERIEVEKPGEQPLDLSSKATNSSSSPVENKMPPNMRLSNLDNNKQIFNSDFRAKPRMSAIAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESHLNSAAPLKIDEEEAVDDDKELSGAEEEKEVEKALQGPLLSMADILRFSNLENQEALKVLLQRGKNGPEGLSALEHGAIGPYIQNFLLASGTNVPSLIKHQEERDAGSLTLLPEFVKRMMVEDQLVKDQCRYQPNNGEIDKIMRTSPSNSVIVKMEKCKSESSDMETDDSPSNVILKIPSFKPTTSKNGNDFYRSSTDSTTIVSPSITSESGSPPVLPGRGMTLKDVKDVIAKSISQKFQQTPEPIRMPSIIEMDYKRTGFTPPMGGIPQMKNHQDLNRPYQHSHQKLPQAVSTSGSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRVAAAAVDKMKPVMQPPQAKFPPTSPNGIKLPIFDPGMAPLGYNPAPFPFWPHPGFGHIPLDYGRNPSTSSFPPNPEQFFASQMMQKLQEESVRTHPNVTLSPVPGAATALPKSARQIAESLLDGTGSNGSFLDGIIRSSLESGVPGSEDKTIKDEKNITPENMSNKALLDQLCRNSRLAPLSKPNMQEPINPGDENYRNPSSPLNFSAAISSEETSANAHFSGDVLDSSPKRFDNPEVHTIELSNDSYESTERDEMEDEQRTTPPGRIYLKQELVNPENLKPEMLVRFRDVLQDVDRNGIGESATGSASESDVAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -