Rgig001667.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- ct
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000001.1:16558653-16581834[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5e-27 3.7e-23 82.1 0.0 2 72 358 429 357 434 0.94 2 3 1.1e-32 1.1e-28 99.8 0.0 2 77 742 818 741 820 0.96 3 3 1.1e-30 1.1e-26 93.4 0.0 3 76 960 1034 958 1037 0.95
Sequence Information
- Coding Sequence
- ATGCGTTTTCCATTTGATGAACTAAAATGTATTGCAGAACCCGATACGAATAATCTCTGGGGACGACTCGAACTCAAAGGGTTGCCTTGTGGACGGGGCGAAGGAAAATTCGGATATGCAGATCATATCAGCCAACTCGTGGAAGAAGTCCAACGGCTTCAGTTAAGCATCACGAAACTTCAGGAGTCGTCCATGTCACAAATTTCGAGATTGGAAGAGGAATTAGAACAAAAAAGGCAGCACATCGCCAGGTTAGAAGCCAGACTCGATCTCCAGAGGGATTATGAAGACCTTAAAAGAGAAATCAGtATATTGAGGTctgttaatttttcaacaaacaATCCTGACAATAAGTCGTCCGTAGAATTATTACTGGACAGATCGAGGAGCGAAGCTTCCGAAGCGCCCGCTTCGATTCCAGACAACGAAGAATTAAAGTTTCCCACTTACCTTCTAGGAGGTGCAATTCCGTCATCAACACAACCTTCAGAGTCACCCTCAGGTCTTCCTAAATCGCCCACAAACACTTCCCTCCCGCCTCTCTTCCAAAACGTCGAAACGTTCGGCACGATACTCGGCGAAGAAATCGTCGCAACTTGGCGACGAAGCATCGAACAAATTACCTTAAACAACCGAATAATACCCTCCTCGCCCTCTATAGATGTTCCAGTTAAGTCTGCGACTCCGGTAATAGCCGACTCGACTGAAAAAAGCACAGCGTCGACGCCACAACCGTCCGAATCCGTTTGCGGAATGCAACAATCCCCTATCGAACCTCTCCTCAATGGCAACCCAAAAAGTCCAGAAGACAACAACAACCAGCACTTGAGTAACAACAACGTCCCGTTAGCGGCGACGATGTGTGCGGTAAACAACTTCCTCAGGAGCGACGATTCGTTAAAGAGCCCGTATCGATTCGAAGACCACAGGTCGCCCTTTCGATTTTCAGACGAGCTCGGGTTGCCGCCGGGATCGATGGTCGGCAGGTTGGGCGAAAGTCTCATTCCAAAAGGGGATCCCATGGAGGCGAGGCTTCAAGAGATGCTCAGATACAACATGGACAAGTACGCTTCGCAGAATCTGGATACGCTTCACATTTCGCGGAGGGTGCGTGAACTGTTGTCGATCCATAACATAGGTCAAAGACTGTTCGCAAAGTACATTCTGGGCTTGTCCCAGGGGACCGTGTCCGAGTTGTTGTCCAAACCGAAGCCGTGGGACAAGCTCACGGAGAAAGGCAGAGATAGTTATAGGAAAATGCACGCGTGGGCTTTGGACGAACATGCCGTTATGCTCCTTAAATCTCTTATACCAAAGAAAGACAGTTTTTCCTCAGGCAAAGATACGGGGATTCCGAATTTTGGACGTCCCGATAACGATCTAACCGAGGAAAGAATAGCACATATCTTAAACGAAGCGTCCcatttacaaatgaaaacGCCCGTCGAAGATACGCATAGCAATGAAGACTCGAAATCGCCGCACGGCCAGTGTTCCAGCCCGTTCTCCAAAGAATTGCAAAAGCAGAAGCtgcgaaaatacgaaaatgacGATATACCTCAAGAAAAAGTGGTCAAAATATACCAAGAAGAATTGACCAAACTAATGGGAAAGCGCATCGAGGATTTTAGAAGGGATCCGTTTCCGGGTATGTTTTTTCCACACTTATTCAGTGGAGGTCCGATGGACAGAACGCAAGAGGAAATACGAATGGCGTTGGACGCTTATCATCGAGAACTGGCCAAGCTAAATCAATGTCAGAATCCGGCTCAAATGACGAATTTGGGTTTACTCGCTCTGCAACAGCAGGCTCTTGCGCATCACCACAATCCTTCCATGAACGGTGGTGCTCAAGACTTGTCTCTTCCTAAAGAAAAGCCAAAGATGATGGTTAACGGGGTCGACGATAAAGAAAAAGACTCTGACGATAACGTTAAGCATTCGGGTAGTGCATTTAGTTTAGTGCGACCAAAAATCGAGCCCGGAACGCAATCGCAAACTACGAGTTCCACGGCGTCTAGTCCATTAAGTAACAGTATTTTACCGCCCGCGATGACACCGACTGACGATTTTTCGACATCGGCAGCGGCGAGTCCGCTGCAGCGAATGGCTTCCATTACTAATTCCCTAATTTCACAACCCCCAAGTCACCAGCATCATCCTACAAGTCAACGTCCCTTAAAGGCTGTTTTACCACCAATTACCCAACAGCAATTCGATATGTACAACAATCTCAACACTGAAGATATCGTTAAAAAAGTTAAGGAACAATTAAGTCAGTATTCTATAAGTCAAAGACTGTTTGGTGAAAACGTTCTCGGGTTATCGCAGGGATCGGTGAGCGATTTACTAGCGAGACCTAAACCATGGCATATGCTAACACAAAAAGGAAGAGAGCCCTTTATTCgcatgaaaatgtttttagaGGACGACAACGCGGTCCATAAACTCGTCGCGAGTCAATACAAAATTGCTCCAGAGAAACTTATGAGAACCGGCGGATACGGAGGAACGCCTTGCGGCACCCCTCTCGGTAAACCGATGCCACCTACGCAGAAAATGATAAACGAAGCCGCCGGATTTCTTAACAAAATGCAAGAAAATCAAAATCTTCTTCCCCCCTCTCTACAAATGGTGTCTGCTCAAAACCAAGTGATGCAACCTCATGGTCCACCCATGTTACTCACCCCGCCCGGCATTCCTCCACAGCACACCATCAACCTGCAGACACCAGAACATCATCACCATCACATGAAGAAATCAAATCCAAGTCCACACGGTATCCCGCACTCGCCGTTATCTCAACACCAAAGTCCAAACTTACGCAGCCTCAACCCTCATATATCGCCTAGCGTCTACGAAATGGCAGCGTTGACGCAAGATTTGGACACTCAAGTTATTACTACCAAGATCAAGGAGGCGCTGCTTGCCAACAATATTGGACAGAAGATATTCGGCGAAGCAGTTTTAGGGTTATCTCAGGGGTCGGTCAGCGAATTATTATCGAAGCCGAAACCATGGCACATGTTGAGCATAAAGGGGCGAGAACCGTTTATTCGTATGCAGCTATGGTTAAACGATGCTCACAATATCGAACGATTGCAAGTATTAAAGAACGAACGCCGAGAAGCAAACAAAAGACGACGTTCTACGGGAGCGGGTGCGCACGATAACAGTTCGGATACCTCGTCGAACGACACATCCGAGTTCTATCATTCCAATTCGCCCGGGCCAGGCCCGCCATCCGCTAAGAAGCAACGAGTTCTATTTTCGGAAGAACAAAAGGAAGCTCTTAGACTAGCGTTCGCACTCGACCCGTATCCAAACGTAGCAACTATAGAATTTTTAGCAGGAGAACTTGGACTGTCTAGTAGAACCATAACGAACTGGTTCCATAATCATCGAATGCGACTTAAACAGCAAGCTCCACACGGGATGCCCGCAGACGTTCCGCCCAGGGACCAAAGTGGTAACCAAGCTCCGTTTGATCCTGTCCAGTTCAGACTGTTATTAAACCAAAGATTATTAGAATTATCGAAGGAGCGAATGGGATTAGGCGGAATGCAACTACCTTATCCTCCGTACCTTTCCACGAACCCGAACTTGGCGGCGTTGATCGGACGGGGACTTTTGCCTTCGGGCGAAATGGACTTGTCGATGTTGGGAAGCGTCGTGAAAGAACAAATGAGCGGTTTGGATTTGTCCATGCCTTCTTTAAAACGTGAACCGGACGACTTCGAAGACGACGTCGAGAGCAACGTGGGCTCAGAAGATTCGAACATGTCGGGTAGTTTGCACGGCGAAGTAAAAAATGAACCAAAGGAAACGCCTTTAGCACAAATAGGGAGCCAAGGTAGATCGTCTAGAAGAAAACCTGCCGCACCTCAGTGGGTTAATCCCGAATGGCAGGACGAAAAGGAAAAACAGTCGACAACCGGAAACGAGGTGATCATTAATGGCGTTTGCGTTATGCAGACGGAAGATTATGGGAGAAGGAGTTTAGAAGAAACGGTACGAGTTGAACCCACCCCAGTTATGGACAGGTTCGATGATGACCAAAGTGATACTTCATCTGTTAATAACGACCACGAAAATGACGTGCACGGAGAACAAAACGAAGAAAAACAAGATGAAGATAATGCTAAGGAACCTAACGAATCTCATAGTGTAGATGAAGAATGTAGTATTCCAATAAAGCGCGAAAAGGAGGACGAAAGGTGGGATTATTGA
- Protein Sequence
- MRFPFDELKCIAEPDTNNLWGRLELKGLPCGRGEGKFGYADHISQLVEEVQRLQLSITKLQESSMSQISRLEEELEQKRQHIARLEARLDLQRDYEDLKREISILRSVNFSTNNPDNKSSVELLLDRSRSEASEAPASIPDNEELKFPTYLLGGAIPSSTQPSESPSGLPKSPTNTSLPPLFQNVETFGTILGEEIVATWRRSIEQITLNNRIIPSSPSIDVPVKSATPVIADSTEKSTASTPQPSESVCGMQQSPIEPLLNGNPKSPEDNNNQHLSNNNVPLAATMCAVNNFLRSDDSLKSPYRFEDHRSPFRFSDELGLPPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWALDEHAVMLLKSLIPKKDSFSSGKDTGIPNFGRPDNDLTEERIAHILNEASHLQMKTPVEDTHSNEDSKSPHGQCSSPFSKELQKQKLRKYENDDIPQEKVVKIYQEELTKLMGKRIEDFRRDPFPGMFFPHLFSGGPMDRTQEEIRMALDAYHRELAKLNQCQNPAQMTNLGLLALQQQALAHHHNPSMNGGAQDLSLPKEKPKMMVNGVDDKEKDSDDNVKHSGSAFSLVRPKIEPGTQSQTTSSTASSPLSNSILPPAMTPTDDFSTSAAASPLQRMASITNSLISQPPSHQHHPTSQRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGTPCGTPLGKPMPPTQKMINEAAGFLNKMQENQNLLPPSLQMVSAQNQVMQPHGPPMLLTPPGIPPQHTINLQTPEHHHHHMKKSNPSPHGIPHSPLSQHQSPNLRSLNPHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIERLQVLKNERREANKRRRSTGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQAPHGMPADVPPRDQSGNQAPFDPVQFRLLLNQRLLELSKERMGLGGMQLPYPPYLSTNPNLAALIGRGLLPSGEMDLSMLGSVVKEQMSGLDLSMPSLKREPDDFEDDVESNVGSEDSNMSGSLHGEVKNEPKETPLAQIGSQGRSSRRKPAAPQWVNPEWQDEKEKQSTTGNEVIINGVCVMQTEDYGRRSLEETVRVEPTPVMDRFDDDQSDTSSVNNDHENDVHGEQNEEKQDEDNAKEPNESHSVDEECSIPIKREKEDERWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00950619;
- 90% Identity
- iTF_01294849; iTF_00977110; iTF_00977194;
- 80% Identity
- iTF_01294849;