Rgig003538.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- JARID2
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000001.1:37194078-37197365[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-22 1.9e-18 67.4 0.0 7 89 262 342 257 342 0.93
Sequence Information
- Coding Sequence
- ATGTTAACGGCGGACGAATCTCATAGTAGTGCATCTATCGCGGTGCAATTAGATATAAATGCCACAGAAGTAATGAACACCGAACATTCGATACAAACAGAAGATGGagaacaattattttacattcctCTTCAACCTGGAAAACAATCGTCCGCTCAACTTATTCAAGGTGTGGCTGTTAAATTAGGAACAAAAGGTGCAAATGGTCCAAATCAAAGGGTAGTTATGAGCGCAAAATTAGTAACACATACCCCAATAGGTGTTCACAATTTAACGGAGAAACCAATCGCGACTTCGAAACCTATGTACCCGCCCTCGACgacgatacaaaaattaaaagttgccGAAAGTAAGAGTTCTGCCAAAAATACAATAACTAGTAGAACGTCCGAAAATTTGGaagatttcaaatataaaatacctagTTCTCCCAGTGCAAGTTCGTCCTCTAGTACAAAAGTTACAAAAAGACAAAACATGAAAACTAGAATCCGACCTCTCGAATTTTGTACTCCTGTTGTATCGAGCGAATTTCCTTCGTCTCATAATCAAGCTACGATATTAGAGGCGCCTATTTTCCATCCAAACGATAAAGAATTTCAGGATCCTCTCGAGTACATAGAAAAAATCAGACCGCACGCCGAAAAATTTGGAATATGTAGAATTGTCCCTCCGAGCAATTTTAAACCTGAATGTAAAGTTTCAGACGATATGAGATTTACTGCCTATAATCAGTATGTGCACAAAATGTTACATCGATGGGGCCCCAACTTTAAGGAGCTAATGGccattacaaaatatttagaaacgCAGAATATAGCATTGAAACATCCTCCGTGGATTGGTGGTATGGAAATAGACCTCCCACGTCTTTATCAAATAGTTCAATTACTAGGAGGCTTAAAAGAAGTAATTGAAAAGAAGAAATGGCCAAAAGTTTCagaattacttaaaatacCTAAGTCTGCTCAAGACAGGGTAACAAAGCTCGACGATATTTACTGTAAATATCTTTTACCATATGACACGTTATCCCCAGCTGAAAGGGAGAAGTTGTTCGACGAAGTGGAAACAGAATGGGCCAAACGGGAATCTCGGTCCTTACTTAAAtctcaacaaaaaattaacaaccaCGATAACAGCCCCAATAGTTCAGAAGTGGATTCTAATGATGAATTTGAAGAATGCATTGTTAAAGGTCGAAGTATGGCACTTAATGCATTTTATCGTATTGCTCGTAACACGATGAGTATGTGGTTTAAAACAATGGAACCTACTGCTCAGGAGgTCGAGCAGGAATTTTGGAAACATGTAACGGTAAAACAAAATCATATTTGTGTACATTCTGGATCTATAGATTCTGGAAATTGGGGATATGGTTTTGCAGTTTCAAAAAATAGTCCCTTTGCTCGACATGCATGGAATTTGAAagtattaacaaataatagtGCTTCTATTTTAAGATCGATGGGACCGGTGATGGGTGTGACGGTGCCTACTCTTCATGTAGGTATGGTGTTTAGTGCATGTTGTTGGTATCGAGATCCACATAGTTTACCGTGGATAGAGTATTTACATACGGGTGGAAATAAAATCTGGTATGGCATTCCCAATTCTATGAGCAAACTTTTTCACACAACTTTAATAAAGTTAGTGCCCAATTATTGCCGTAATAAATCTCTGTGGTTACCATCAGATACGGCTATGGTGCCGCCCAGTCTCTTAGTGGAAAACGGAGTTTCTTTATGTCGAACGATTCAAGAGCCCGGTCAATTTATAGTGGTTTTTCCTAAAGCTTTTACCTCAAGTATATGTACTGGATATGTGGTGTCTGAAAGTGTTTATTTTGCACCTTTGCATTGGTTGAATACTGCTCAAACAGTTTTTAATGAACTTCAAAACAGTTGTGAACCCTCCATGTTTTCGCTtgaaaaattactaataaacatAGCAACGGACGTTCGTTCAAATGTAGATGTCTTGAATCAAGCAATACCAGCTATAGAATCTTTAtgcgaaaaagaaaaattcagttgGACTAAATTGGAAGAAATTGGATTAACGGCcaaagagaaatatcaattgcCCGAACCacaagttaaaaaaaagaaaaaaattccaaGCAGCGGTAACGATTTTGAATGTGAAGTGTGCtgtaaaaatctatttatttcttgggtCTTAGAATCGCAAGAGGACATTATTTACTGTTCAGTTCATGCAatcgaatttattattgaaaagaaaatcgacgttcaaaattgtaaattaatttatacatataatgaAGAAGAACTAAAGAACGTCATTGCAAAAATGAGAAGcacaattgaaattaaattgcatAAAAAGAGTGGGGGAAAAGGTATGGGTACATCctgttga
- Protein Sequence
- MLTADESHSSASIAVQLDINATEVMNTEHSIQTEDGEQLFYIPLQPGKQSSAQLIQGVAVKLGTKGANGPNQRVVMSAKLVTHTPIGVHNLTEKPIATSKPMYPPSTTIQKLKVAESKSSAKNTITSRTSENLEDFKYKIPSSPSASSSSSTKVTKRQNMKTRIRPLEFCTPVVSSEFPSSHNQATILEAPIFHPNDKEFQDPLEYIEKIRPHAEKFGICRIVPPSNFKPECKVSDDMRFTAYNQYVHKMLHRWGPNFKELMAITKYLETQNIALKHPPWIGGMEIDLPRLYQIVQLLGGLKEVIEKKKWPKVSELLKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETEWAKRESRSLLKSQQKINNHDNSPNSSEVDSNDEFEECIVKGRSMALNAFYRIARNTMSMWFKTMEPTAQEVEQEFWKHVTVKQNHICVHSGSIDSGNWGYGFAVSKNSPFARHAWNLKVLTNNSASILRSMGPVMGVTVPTLHVGMVFSACCWYRDPHSLPWIEYLHTGGNKIWYGIPNSMSKLFHTTLIKLVPNYCRNKSLWLPSDTAMVPPSLLVENGVSLCRTIQEPGQFIVVFPKAFTSSICTGYVVSESVYFAPLHWLNTAQTVFNELQNSCEPSMFSLEKLLINIATDVRSNVDVLNQAIPAIESLCEKEKFSWTKLEEIGLTAKEKYQLPEPQVKKKKKIPSSGNDFECEVCCKNLFISWVLESQEDIIYCSVHAIEFIIEKKIDVQNCKLIYTYNEEELKNVIAKMRSTIEIKLHKKSGGKGMGTSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -