Rgig024012.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- ARID5B
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000088.1:21156801-21166180[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.65 2.6e+03 -0.3 0.0 36 52 129 146 127 166 0.78 2 2 1.3e-25 5.4e-22 78.8 0.0 1 89 241 327 241 327 0.93
Sequence Information
- Coding Sequence
- ATGAGGGGGTCATATCCTGGAGTACCCAAATGGGACGAAGTGTTGGCGATATCTGAAAAAGTCGTTCTTCGATTAGAAGATCTTAAAACGTGGATAACTTTGGACGCCGAATGGACGTGGGGTCGATTATCGAAGTGGGAGGCGGAGGTGAAAGAaccgaaaaaaatcgaaaatgaaataaaaaacaacactACTAGCTTAAGTGAAGATCCCCATCACTGTTCAGAATCAATTAAAGATAAAGAAAGAGAAagagaaaaagaaaaagaaatagtTAATGaCGAAATGAACAACAAAGGTCCATCAGTAGTAATATTAAGTTATCCCTCGTATTGCCGTTATCGTGCAATGATGAAACGTTTAGAGGGTGTCGAAGATGAATATCTTAAACACACAGTAGTGAAAGTACTAGGAGGATTTAGTTCCGTAAATAAGGACACGCGAGTTCTCTTTTGTAGGGATACCTTCGATTATCCCGAATTGGAGGGCCACGAGCTCCTCTGTAACCATTTAGCTCCCAAATTAAAAGGAAGGCCTAGAGGTCGGCGGAAAAAAAGAAGTTTGTCTCCTGGCTCAGAAAGCAACGAATCGGAATCTTCTGTTTCAAACGTGTTCAATACGGCAAAAaCAAAGCTCACGACTGAAGGTAATTTAGGCGAACAAAGTTCTGCGAGCACATCTTGTCCAAGACGTAGCACACGGGCGAGCGTTGGAAACATCGAAAATAAAGAGTTTATGAAGAAATTAAGCAACTTTATGAAATCGAACCATACACCAATTGGACGAATACCATCACTGGGTTACAGAGAACTGGAtctttatacattttttacgaAAGTGGATAAGTTGGGAGGATACGATGCTGTAACATCAAATCGACTGTGgaaatcaatttttgacgATCTTAGTGGCAACTACATCAGCACAAGTGCAGCTACAGTTATTAGAAGGCATTATGAAAggTTTCTATTACCTTACGAACGTCATCTTAAAGGCGAAGAGTACAAACCTTCGACGTCTTCCATCAAACGAACGAAAAGTAATTCGTGTAGTGGTAGTGATATAGATTCGAGTGAAAGTACGAGTAGTGGAAATAGTACACCTGTTCCACAACTTACTGTTATTCCAATTCCTTCAACTTCAACTGCTCATCTCAAGGAATCAAAAACAACGGATCAACCTAGTAGAGTAAAACCTGAAATCAAGACTTCCTCTTCACTCAGAAGTGTACGGGTGAAACCTGAACGTTTACGAGAACAAGCGTCCAAAGATAAGGCAGCTCCCGTCAAAAGTTCCGCGAACGTGGAAACTACAAAAGTAAATAGTGCAAATGAGAAAACTTTAAATGAATACAGTGTCGAAATTAAATCGTCATCTAGAAAACGAAGTGATAGTAGTTCAACTAATAACGGTTTAACGGTCGAATTAATTACGGCGGCGGTACCACCACCGGCGCCTGTACCACCGCCACCGCCGGAGCCTGTACCGcaaaaaactataataaatgATGCTTTAGAAATATCGTCAAACACAGTGACCAAAATTGAACCTTCCAATGCAACTATAGAAAAGATTCCTAGTATATCTCAACCGTTTAATCCGCCACTTTCGGTAACTGCGCAAAAATCAACCACGGATAAAGTTACGTTAGCGGATGGTAAAGAAAATATAGCTACGTGCAATACAAATAGTGTTTCTAGTGTTCATATCTTAAAAGACACGGTTGTTGATCTCACAGAGGTGCCATATAAACCAAAAACTCCCGAAATAGTGCATTTAGATACAGAATCTACCGCTAATATTATTTctagtaataatttaagtaattcgttGTTACATAGtgttaaaaaacgaaaattggacattttaaaagaagGTGGCTTAGAAGTAACTGCAGTTAAACCGACAAACACAGaagtaaaagaaattaaagaaaataggCCAACAGTCATTCATCATCCGATCGCGCCGAAAACATCCGTAGGTCAACTATCTATCACTTTAGCTCCAGATAAACAAAGAATACTTACATCATCAAACAGTATGGAAATATCTCAAAGAACCGTAACACCGCAAAACATTTACGTCGACGGTGCAACGCCTCCTAGTACAACAAATTCGCATCATACCAAACCGGAAAATAAATCCTCgaataataattcatttttgtacATGAACGGTCATTCTCCACCAAAAGTTGTACAATCTAGATCAATTTATTCTTATTCGGAAAAAACAGTATACGGTAACCCGAAAGACTATTTCATACCACCATTAAGACCTGCACCGCATGCTCCAAGATTCGTCGAGTCTTCTCCAAAACATATGGGCGGAGAAATACTAGATCTAACGGTGAAAAGTCCTCAAAAACCTGTTGTCGAAATTATGCGGGTGCCGACCGTCGCTGCTCGCGTGCCCTCAAAACTAGCGGAATTTTCTTCCAAAAAGTCGTACAAAAATTCAACGGCCCTGCCAGTATTAGATGCCAGAGTTAGTTCAAATTTAGAAATCACGTTAGTGGGACCCAATTCCAACTCTCATAGTattcaacaaattaataagACAATTAACAAATATAGTTCCGCGAATACCGCAGGTCTTCATCCGCAACAAATGCCCATACATACTTCTACAACACACAATTCAATTCCCGCGCACGGAAGTTATAATAGTAATAGCAAGATTGGCCAAAAACGAACGTTTAACGGAAACTTTGTATCAAATAGAAAAGAAGAAAATGGAAGGCTGCCATATTTGATTCCGCCAACGCAGAACGCCTACGCACCAAGAGAACACAGGTATCAAAATAATGTGGACTTTAATCATTTGACCTCTTACAATAATAGAAGTTCGATGCCTAAAATAGAAAGTAGTAGAACTCATGTGAAAGCATCAGTGCATCAGCCTCCGAATTTAAAGTCGTACGCAACAACTCCAACAACTATGTTACCTGGATATTTCACTCATTTATCCATGGCGTCTAAACTAATGCCTCCATACGTACCTCCCATAGATCCCCTCTATTATTCCGCTTTACAAAACCTTTATCCCCACAATCCCTTACCTTCGGTGCCTCCTTTTTTTCCTGTACCTACTCCGGaccaattacaattttatacgGACATTATGGCACGGAATTCTCAAATGAGGTTTCCGTTTCCTTATTCTTCGGATGCGCATTCGTCAGTAATGACTGCAAATACAGAGaataacaattacaaaaaataa
- Protein Sequence
- MRGSYPGVPKWDEVLAISEKVVLRLEDLKTWITLDAEWTWGRLSKWEAEVKEPKKIENEIKNNTTSLSEDPHHCSESIKDKEREREKEKEIVNDEMNNKGPSVVILSYPSYCRYRAMMKRLEGVEDEYLKHTVVKVLGGFSSVNKDTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGRRKKRSLSPGSESNESESSVSNVFNTAKTKLTTEGNLGEQSSASTSCPRRSTRASVGNIENKEFMKKLSNFMKSNHTPIGRIPSLGYRELDLYTFFTKVDKLGGYDAVTSNRLWKSIFDDLSGNYISTSAATVIRRHYERFLLPYERHLKGEEYKPSTSSIKRTKSNSCSGSDIDSSESTSSGNSTPVPQLTVIPIPSTSTAHLKESKTTDQPSRVKPEIKTSSSLRSVRVKPERLREQASKDKAAPVKSSANVETTKVNSANEKTLNEYSVEIKSSSRKRSDSSSTNNGLTVELITAAVPPPAPVPPPPPEPVPQKTIINDALEISSNTVTKIEPSNATIEKIPSISQPFNPPLSVTAQKSTTDKVTLADGKENIATCNTNSVSSVHILKDTVVDLTEVPYKPKTPEIVHLDTESTANIISSNNLSNSLLHSVKKRKLDILKEGGLEVTAVKPTNTEVKEIKENRPTVIHHPIAPKTSVGQLSITLAPDKQRILTSSNSMEISQRTVTPQNIYVDGATPPSTTNSHHTKPENKSSNNNSFLYMNGHSPPKVVQSRSIYSYSEKTVYGNPKDYFIPPLRPAPHAPRFVESSPKHMGGEILDLTVKSPQKPVVEIMRVPTVAARVPSKLAEFSSKKSYKNSTALPVLDARVSSNLEITLVGPNSNSHSIQQINKTINKYSSANTAGLHPQQMPIHTSTTHNSIPAHGSYNSNSKIGQKRTFNGNFVSNRKEENGRLPYLIPPTQNAYAPREHRYQNNVDFNHLTSYNNRSSMPKIESSRTHVKASVHQPPNLKSYATTPTTMLPGYFTHLSMASKLMPPYVPPIDPLYYSALQNLYPHNPLPSVPPFFPVPTPDQLQFYTDIMARNSQMRFPFPYSSDAHSSVMTANTENNNYKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -