Rgig023914.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- Atf6
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000088.1:19729751-19733487[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-17 8.3e-14 52.2 13.1 3 57 323 377 321 381 0.94 2 2 8.9 1.5e+04 -3.1 0.0 45 58 475 488 475 490 0.62
Sequence Information
- Coding Sequence
- ATGTTAACGACTAACGATCCTTTAGATGTTGATGACTATGTCTTTAAAAGTTCGCCGGAATCGTCCGGAGATGATTCTTTGTTGAgtgATTACTTCGACAATCCCTCAGATGAAGACTTCTTACAGCAATTATCGTCCGATTTGGACATACCGTTGCTATTAAATCCGGGTGAAGAAGAAATGAGTttgttaaattcatttttcgataaaagtCCGGAAGAAATTTTATCAGAAATTAAGGCTCCAATGATGAACATTAAATGGCAAGATGTACAGAACGAATTGAACGAATTGCATGAGATAGATTTAACTCGGTGCGGCCCGGAAGCATTTCCCAACGTAAAAGCAGAAATTAAAATGGAACTGCAAGAAATGGACTTAATTAATACATGTTTTAAAGACGAttctacaaaaatttcaaatgcaaAAGATTCTGTTACAAATACGGAAATAACATTTGAGGATGTCCTTCAAAAGTCGACCATTATAAAAACagatttaaataagaataataatcaTCTGTCCactaataattcaaaaaatattatactgGCACATCAAATCTTTcctcaaaatgtaaaaatttcaaagttgcCTCCAAAACGAATTGCAATTTCGCCGAAAACTCCATATACAGTTCCTCTATctcaaaataaacagaaaGTAATGTTGCTCCCTTCTACTCCTAATACTCGTGCTGCACATATTTTACCAAGAAatattactaacaataaagttGTTATATTGGATAACATAACAACAGCAGCAACTGTTaatggtaatttaaaaacggtGACAACGATACCTCAGATTACTACCATTACTAATCCTGTAACGATTTCTACAATTAATACAGACAACAGTTCATCAACAGTTACATTAACATCTGTAACATCACCTATTAGTAAGGAAGAAGCTCCATTTAGTATTATAACATCTCGAGGTATGGCCATAGATGCCAGAGCTTTAAAAAGGCAGCAGAGaatgattaaaaatagagAATCGGCATGCTTATctagaaaaaagaaaaaagactACGTGACATCGCTTGAAATACAAGTGCAACAACTGACTGAAGAAAATGAAAGATTGCAAACGGAAAATATGCAGCTAAAACAACAACTTACAAAACAATCGCAATCCCCATTTTCAGTATTGAACATACCTTCAAAAACCGTAACGAGAACTTTGGCGGTGTGTGCACTTTTTTGCGTGATGAGTTtgaatatcaattattttcaaaGTCCATTACTTGCCAAAAACAGCGGTTTATCCACATATAGGTCTGAACGTGCTGTTCAAGATCATCATGGAAGAAACTTGTTGTGGTCAACAGATATAGATGATTCTCAGCCAAGTTTTCCCACAAAAAATCAAAccaaagaatttttaaatttaccaaTGTGCCCTATGAATATAAACCAGTCTGAAAATGTTCGATTAGCTCTCGAATTACACAGattaattgGAAAACCGTACAACATTTCCAGCCAGTTTCACGAACCAAACTATTTTCACAAGAAAGAGAGACGTTTAAAACCTCGTAATAATATGCTAGGTGTGCCTCTCCATTCGTCTCTATATAAAGTAAACAGACGCAGCAAAAGAGTCACATATGCCAGTTCCATAAATAATGAGCTTCAAATTTTTTCGCCAACTGAAGAGCAGGCGTATGCAGAATTTTTCGAAGCAATCAATCGACAAGGGGATACCTTTTATTTGGTTTCACTTAGTCCAGATCATCTCCTTTTACCTGCTTTAAACCACAACAAAACCCGGAGGCCTAAAATGTCTCTTCTACTGCCATCAATGCTATCTAATGttACTCCATTTTCATCGCAAGCACCCACAATATCGCTTATGCAGATCGATTGTGAAGTATTAGATACTCGATTATTACATGTCAAGTATGGTGTAATTCCGCAACATTTACGAGCTCATGGTAATATAACTCAGGGTTCAACTACCGATAGTGTGCCTGATCCAAATTCGACAcgtgataaaaattttacctcGAACAATTCGTACAAGCCTTACTTTATGCGTAAGTcctatctaaaatttaaagattccCCAAATGGTTTCGATGAAAGTAACAAGAGAAAGAAAAATAGGAAAAACTCGTAA
- Protein Sequence
- MLTTNDPLDVDDYVFKSSPESSGDDSLLSDYFDNPSDEDFLQQLSSDLDIPLLLNPGEEEMSLLNSFFDKSPEEILSEIKAPMMNIKWQDVQNELNELHEIDLTRCGPEAFPNVKAEIKMELQEMDLINTCFKDDSTKISNAKDSVTNTEITFEDVLQKSTIIKTDLNKNNNHLSTNNSKNIILAHQIFPQNVKISKLPPKRIAISPKTPYTVPLSQNKQKVMLLPSTPNTRAAHILPRNITNNKVVILDNITTAATVNGNLKTVTTIPQITTITNPVTISTINTDNSSSTVTLTSVTSPISKEEAPFSIITSRGMAIDARALKRQQRMIKNRESACLSRKKKKDYVTSLEIQVQQLTEENERLQTENMQLKQQLTKQSQSPFSVLNIPSKTVTRTLAVCALFCVMSLNINYFQSPLLAKNSGLSTYRSERAVQDHHGRNLLWSTDIDDSQPSFPTKNQTKEFLNLPMCPMNINQSENVRLALELHRLIGKPYNISSQFHEPNYFHKKERRLKPRNNMLGVPLHSSLYKVNRRSKRVTYASSINNELQIFSPTEEQAYAEFFEAINRQGDTFYLVSLSPDHLLLPALNHNKTRRPKMSLLLPSMLSNVTPFSSQAPTISLMQIDCEVLDTRLLHVKYGVIPQHLRAHGNITQGSTTDSVPDPNSTRDKNFTSNNSYKPYFMRKSYLKFKDSPNGFDESNKRKKNRKNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -