Rlut023249.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- pnr
- Assembly
- GCA_958510855.1
- Location
- OY294039.1:47325389-47327497[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-17 1.9e-13 50.7 2.8 1 35 360 393 360 394 0.98
Sequence Information
- Coding Sequence
- ATGCTGGATTCCCTCTTAACGTCGTCATTTTTGGCAAAATTACCATACGAGAAAAACGACGAATGGCGACGACCGTCAGGCACTCCACCTCGATTAAACGAAAACCTACAAGATTCTTACTCCATTAAAACCGAACCCATAGAATCGAATCAATCTTCATCAGAATCTTCTAGATTTACAATAAAACTCGACGTGGATTACGATCAGCAACGATTAGTTGATCCATTATTGAGACTAAAAAACGATACTTCAATCCAAATCACTCCCATACCTTCTTCCAATTCAGAAACTAGGGAAAGTTCACCGCAATTACCTACTAGAGAATTAGAGAACACTTGCAATAACAACGAACAGAGTCATAAAAAGGAAAATTCGAACCACATAGCTTTTCTTGATTCACTCAACACTCCCGTCTCGCTCGTGAGGCCTTTACCTCCACCAAGTCCTACCGAACCTGCCGATTTGTCAAGcaaaaaaccagaaaatgttACATGTGTGCCTGAAATCGACTTCATCAAAGAGGAAGTCAACGATGCCGCTTCTGAATACAGTAATAGTTCCGATCCTGATCGACTGGAAGTTGACATGTCACACGGCATAGACGATCGCTCCAATTCAACAACTGCTAGTGCATCATCTCCTTCTCCAGATAACCAAAATGACGAAGAAAAACAATTGTGGAGAGCGCTTTCACAAAACGGACATACTCAGGGACCTCCATTTATGGGCGAAGCCAGTCAACTTCTTCGAAAATTGATAACTTGTCGGAAATTAGGGATGAGTATAACTCCAACGCCTTCTAATCACGGTTATACTCAAAACGACCACCGATCGAATCACGCTAAGGAAATGGCACTGGCCGAAATTGGTTTGACCAAATCGTCGGGAAGACGAAAACAAAACTTTCCTACTAAAGCACCACTAGAAGAGCCAAACGTTAGGGAGGGAAGTCCGTGTCGTGAAACAGATGTAGATATGGACTATTTGCCTGATTTTACTGGAAACAATCCTTGGTGCAATTTACAAATTGTTAAAACGAAGggtGGACCGGGTATGGCTAGAAGAGTAGACTTATCGTGCACAAATTGCGGTACTCAGACAACTACAATTTGGCGACGGAATGTGAAAGGAGAGATGGTATGCAACGCCTGTGGCTTATACTTTAAATTACACGGTGTGGATCGTCCTCATACAATGAGAAGAGATACTATACATACCAGACGTCGCAGACCTAAAGCTGCCGAGTCTggaattgaaaaagaaaaagGAAAGAAATCAAACAACGCAAACGAGATGATGGATTTTGAAAGTGCCTACGATTCGGTtaggaaaaatataaatttagcTTCTCGAAAAAGTAACAACATCACTAAAGTAGACACGGAAAAAATGTTGACTGTTTTGAGAAGACAAATCCCAATTGCTCCGAAAGTTTTAGGCAGCAACCACGAAGCTGATACCGAAGACATGTTAGCCGCACTTCGTAGACAAATACAGCCTCACCTAGTTATGGCATTGCAGGGTCACCCTAATTCAAATTATGCATCTTTGCCGTCTGCCAAGTTTCCTCCTAACTTGCCAAAACACGAATCTCCGGTGGGTTCGGCAGCAGACATGGAATCGGACGAAGAAAGCATAGCAGATTTACCGTTAAATTTGGTAGCAACTCAAATGACAGAAACAGAAACGCATTAG
- Protein Sequence
- MLDSLLTSSFLAKLPYEKNDEWRRPSGTPPRLNENLQDSYSIKTEPIESNQSSSESSRFTIKLDVDYDQQRLVDPLLRLKNDTSIQITPIPSSNSETRESSPQLPTRELENTCNNNEQSHKKENSNHIAFLDSLNTPVSLVRPLPPPSPTEPADLSSKKPENVTCVPEIDFIKEEVNDAASEYSNSSDPDRLEVDMSHGIDDRSNSTTASASSPSPDNQNDEEKQLWRALSQNGHTQGPPFMGEASQLLRKLITCRKLGMSITPTPSNHGYTQNDHRSNHAKEMALAEIGLTKSSGRRKQNFPTKAPLEEPNVREGSPCRETDVDMDYLPDFTGNNPWCNLQIVKTKGGPGMARRVDLSCTNCGTQTTTIWRRNVKGEMVCNACGLYFKLHGVDRPHTMRRDTIHTRRRRPKAAESGIEKEKGKKSNNANEMMDFESAYDSVRKNINLASRKSNNITKVDTEKMLTVLRRQIPIAPKVLGSNHEADTEDMLAALRRQIQPHLVMALQGHPNSNYASLPSAKFPPNLPKHESPVGSAADMESDEESIADLPLNLVATQMTETETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01293235; iTF_00273281; iTF_00269414; iTF_00928333; iTF_00272121; iTF_00270715;
- 90% Identity
- iTF_01293235;
- 80% Identity
- -