Basic Information

Insect: Rhagonycha lutea
Gene Symbol: HINFP
Assembly: GCA_958510855.1
Location: OY294036.1:94483615-94487045[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.57 38 6.0 0.7 4 23 89 110 87 110 0.90

2 10 3.9 2.6e+02 3.4 0.6 3 23 124 146 122 146 0.91

3 10 0.015 1 10.9 0.2 1 23 183 207 183 207 0.98

4 10 0.0004 0.026 15.9 0.5 2 23 222 245 221 245 0.94

5 10 0.011 0.7 11.4 0.8 3 21 253 271 252 272 0.94

6 10 3e-05 0.002 19.4 1.1 1 23 281 303 281 303 0.99

7 10 0.00075 0.05 15.1 1.1 1 23 307 330 307 330 0.97

8 10 0.006 0.4 12.2 3.5 2 23 337 358 336 358 0.97

9 10 2 1.4e+02 4.2 4.3 1 23 364 387 364 387 0.95

10 10 0.66 44 5.8 5.0 1 23 394 417 394 417 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.57	38	6.0	0.7	4	23	89	110	87	110	0.90
2	10	3.9	2.6e+02	3.4	0.6	3	23	124	146	122	146	0.91
3	10	0.015	1	10.9	0.2	1	23	183	207	183	207	0.98
4	10	0.0004	0.026	15.9	0.5	2	23	222	245	221	245	0.94
5	10	0.011	0.7	11.4	0.8	3	21	253	271	252	272	0.94
6	10	3e-05	0.002	19.4	1.1	1	23	281	303	281	303	0.99
7	10	0.00075	0.05	15.1	1.1	1	23	307	330	307	330	0.97
8	10	0.006	0.4	12.2	3.5	2	23	337	358	336	358	0.97
9	10	2	1.4e+02	4.2	4.3	1	23	364	387	364	387	0.95
10	10	0.66	44	5.8	5.0	1	23	394	417	394	417	0.97

Sequence Information

Coding Sequence: ATGTTTGCCCCAAATGAACAGAAAAACTCTGAAAACTTCCAACTGAAAAACCGTTTGGCAGTTTTTGAACAAGTTACGTGCAAAGAAACGACAAGTGAAAAAGTTGATAGGAAGAGTTTGAGTTTCAAGAAGAATTCCTTCAAGCGCGACCTTTCAGATTCTGAATTGATCATAGACGACGATGAAGACAACTTTCGTTCGCAACCTCCAAAAAAAAGGAACAGGGGTGTTCGATTGGAAGAAGAACCACTCAATTTATTGTGTGGTTGGAATGACTgccaaacaaattttaacagTTATGAGGTATTCATCAAGCATTTCAAGAAGCATTTGGACGAATGTGAACAAGATGAGGAGAACATAATTGCGTGCAAATGGGAGAAGTGTGCATATGTAACGAAAGATATTCAGTTATTGAAGCAACATTTACATTTTCATGGTTATCAtgcaaagttaaaaaatgttggtAGCAATGTACTCGAAAGAATGAATCTTCCTGAATGCACCCTAACAGATGAGTTCGTTATACCTGAAAATGGAGATGGATACGAATGTGACTGGATCGAATGTGGAACATACTGTGTTTCAGTGTACGAATTGTACAGTCACATTCAAAtacatataaaaaataatccaaaGTATTGTGCGAAGGGTGAAACCATAACATGCGAGTGGAAAGGATGCACTTATAAATTTAGTTCACAGTATAAGTTAGCAGATCATTTACGATCTCACACCAAGGAAAGAGTGGTTGCTTGCCCCACCTGTGGAAATATGTTTTCTACTAAAACCAAATTTTATGATCACAGAAAAAGACAGTTACCCCTCAACATGCAAAGTTATCAATGCTCTCAATGTTCTAAACTGTTTCCCAGTGAACGGCTTTTAAGGGATCACATGAGGTCCCACATTAATCTGTATAAGTGCTCACTTTGCGATATGACTTGCCCAAAACCATCGGTTTTGGCCACTCACATACGATACAGACATCTTACAGAAAGACCTATTCAATGTAACATTTGCAAGCATAAATGCATTTCGAAGCAAGCCTTAGAAACACATTTAATGAGCCACATAGCTGAAAAGTTATTTGCTTGTGATGAGTGCTCTTTTCGATGCAGATCATTGTATGGTATGGATAGACATTACCATAAAGTACATGGACAGGCTTGGTCGACTTATGAGTGCCACTGTTGTCAGATGAAGTTCCAGCGTGGCAATTTACTCACAAAGCACTTGATGAAAGCACATGACTTTCACTGGCCCTCAGGTCATTCAAGATTCAGGTACAAAGAGGACACTGATGGAATCTTCAGATTGCAAACTGTGCGATATGAGAGCATTGAAGTCACCGAAGAAATGATAAGAACAAACAGTAACACAGAAGCAACACCATCAATTTCCAATAGTTGTAAATATGACTTAAAGAAACGTCAAAGTTCTCCAGACAAACCACCCAGTTATGTGTTAATGGTTGCTGAAAATGGTGACGAAAATGTTGTATGTCCAACTGACAATAGCATAGTATTGATGATAAATGATGTGGATGATAAAGGAAACATTGTGAATAGTGAAGTGTTGCAAtcaaatgaaatgaaaataatgaactAG
Protein Sequence: MFAPNEQKNSENFQLKNRLAVFEQVTCKETTSEKVDRKSLSFKKNSFKRDLSDSELIIDDDEDNFRSQPPKKRNRGVRLEEEPLNLLCGWNDCQTNFNSYEVFIKHFKKHLDECEQDEENIIACKWEKCAYVTKDIQLLKQHLHFHGYHAKLKNVGSNVLERMNLPECTLTDEFVIPENGDGYECDWIECGTYCVSVYELYSHIQIHIKNNPKYCAKGETITCEWKGCTYKFSSQYKLADHLRSHTKERVVACPTCGNMFSTKTKFYDHRKRQLPLNMQSYQCSQCSKLFPSERLLRDHMRSHINLYKCSLCDMTCPKPSVLATHIRYRHLTERPIQCNICKHKCISKQALETHLMSHIAEKLFACDECSFRCRSLYGMDRHYHKVHGQAWSTYECHCCQMKFQRGNLLTKHLMKAHDFHWPSGHSRFRYKEDTDGIFRLQTVRYESIEVTEEMIRTNSNTEATPSISNSCKYDLKKRQSSPDKPPSYVLMVAENGDENVVCPTDNSIVLMINDVDDKGNIVNSEVLQSNEMKIMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01293015;
90% Identity: iTF_00928185;
80% Identity: -