Basic Information

Insect: Rhagonycha lutea
Gene Symbol: CYP6K1
Assembly: GCA_958510855.1
Location: OY294041.1:42017192-42024353[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0052 0.34 12.4 0.9 5 23 50 68 48 68 0.95

2 8 0.0017 0.11 13.9 3.3 1 23 102 124 102 124 0.97

3 8 0.03 2 10.0 6.0 1 23 144 166 144 166 0.96

4 8 0.0015 0.097 14.1 2.7 1 23 172 194 172 194 0.98

5 8 0.00012 0.0077 17.6 0.5 2 23 201 222 200 222 0.97

6 8 0.023 1.5 10.4 1.2 1 23 256 278 256 278 0.97

7 8 0.00011 0.0075 17.6 4.4 1 23 329 351 329 351 0.98

8 8 0.032 2.1 9.9 6.8 1 23 357 379 357 379 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0052	0.34	12.4	0.9	5	23	50	68	48	68	0.95
2	8	0.0017	0.11	13.9	3.3	1	23	102	124	102	124	0.97
3	8	0.03	2	10.0	6.0	1	23	144	166	144	166	0.96
4	8	0.0015	0.097	14.1	2.7	1	23	172	194	172	194	0.98
5	8	0.00012	0.0077	17.6	0.5	2	23	201	222	200	222	0.97
6	8	0.023	1.5	10.4	1.2	1	23	256	278	256	278	0.97
7	8	0.00011	0.0075	17.6	4.4	1	23	329	351	329	351	0.98
8	8	0.032	2.1	9.9	6.8	1	23	357	379	357	379	0.98

Sequence Information

Coding Sequence: atggaaattaaaattgaacCAGAGGATTGCATTGAAATCGAGTTCGATCCATTGCATCATTCAATTGATATTAAAGAAGAGAGTACACTTCTTGAAGCTGAAGTGGATGAAGAATATGAAGGTCAATTAAGTCAACAATTTGAATGTGTATGCAACTTAAAATTTACTGATAAATCTGAATTCAAAAAACATGCCAAAATTCATAGTGGCACAAATTTATTTGAGCCGGAAGCTGATGACTTCAAGGATTCGACTAAAAACCATTCGatacaacattttatttctCATATCAAAGACAAACGCTTTTTCTGTCAAATTTGTGATTTCGACTgttcaacaaaacaaaatttgaaagtacATTTAATGAATCATTTGGGTATAAAACCTTTTGAATGTGagCATCTAATGTCTCATACCGGAAGCGAACCCTTTGTCTGCGAtatttgtgacttcaaatgtTCAACAAAGCACCGTTTGAAAAAGCATTTCATGGCTCATACCGGGGAAAAGCCTTTTTCATGTGAAATGTGCGATTTTAAATGTTcagcaaaacaaaatttgaaagtacATTTAATGACCCATATCGGAGAAAAACCTCTTGTCTGTGAAGTCTGTGATTTTCAGTACCCAACAAGATATCTTTTGAAAAAACATCAAATGACTCATAGCGAGGAAAAACCTTTTGCTGGTGAAGTAGTTGATTTTGAATGTTCAACGCAGCAAACTTTCACAGTACATTTAGTATCTCATCCCAGGGAAAAACCCTTTATATGCGAGGTTTGTGCTTTCAAATGTCCAACAGAATATCTTTTGAAAAAGCATCTATTGAGTCATTCCAGGAAAAATCCACTTATTCGTGAAATTTATGACTTTAAGTGTTCAAGTATCGGAAAAAACCCTTTTGCTTGTGACAAGCctgattttaaatattctacaaagcaaaatttgaaaGAAGAGTTAATGACTCGTACCTGGGAAATTCCCTTTGTCTGTGAAGTTTGCAACTTGAGCTGTTCAACTAAATACCATTTGGAACAACATTTAAAGTCTCATACCAAGAATAAATCCTTTACCTGTGCACTTTGTGACTTCAAGTGTTCAACAAGACACCGTTTGAAACGACATTTAATGAGTCATCCCAGGCAAGAACCTCTCGCTTGTGAAATTGATGATTTTAAATGTTCAACAAAGCAAGAGTTGAAAGAACAGTGTAAGAGTCATTCCAAGGAGAAACCTACTGTATGTGAGgaGTCTCCatcaatttctttttatattgtCGGTACTGTGGTAGCAGCATTATTGTATCTATATTTACACTTAACGCGGAActttaaatattggaaaaatcaaaatataccTTATGTACCGCCAACAGTACTCTTTGGAAATATCTTTAATATATGTACTTTTCAAAAATGCATGGGAGAATTTATGAGCGACCTGTACAACAGGAGCACATCAAAGATACTCGGCTTCTTCGTATTCGACCAACCGTTTTTATTTATTCGTGATCCAGATCTAATTAAACAATTACTGGTGAAAGATTTTGAATATTTCTCAGATAGAACTGTTGTGTCAAATGGAGAAAATGATCAGTTTGCgtcaaaaatgttatttactgTTAAAAATCCTATGTGGAGaaatttgagaataaaattAACTCCAGCATTTACAAgcggtaaaattaaaaatatgactGCATTAATGACTGACGCATCTAAAGGATTAATTGGGTATATTGATAATAAGTTGAGCCATGCAAACGAATTTGATGCGAGAAATTTGACTATGATGTATACTACTGATGTTATTTCTTCTTGTGTATTTGGAATTGCAGCCAACTCCTTTAATAACGAAAACGCGGAATTTCGAGCGgcttcaaaaaaaatatttgaactgACTCTAACAAGAGCAGTACATTCTGTATCATCTTTTCTTGCTCCGATGTTATTTAAGACATTTAAAATGAGGTTTCTTGATCCATCTGCAGTTGAATTTATGCAGAAAGCTTTCATTGAAACTCTACATGAAAGGGAAAAGAGTAAAGAATACAGAGGAGATTTAATAGACATTttggttcaaattaaaaataacgaagaaaGTGGATCCGACTTCGATGAAAATACATTGGTGGCTCAAGCGATCCAATTCTTTGCCGCTGGTTTTGAATCTACCGGATCAACAAGTTTTTATTGTTTGTATgaattaagtaaaaataaaagagTACAAGAAAATCTTCGACAAGAAATTAAAAGTGTACTAAAGGGACATAAACAAATTACATACGATTTAATACAAGAAATGTCATATTTAGATATGGTTATACATGaaattctCCGTAAATATCCCATATTGCCCTTTGTAGACAGACAGTGTACCAAAACGTACAGAATACCAGATACCGATGTAATTGTCAAAAAGGGTATGAAAATTTATATATCTCTTACAGGTCTTCACTACGACAGTAATTACTTTCCGGATCCTGAAAAATTTATACCAGAACGTTTCTCACCTGAAAATAGAAGTAACATTACAAGTAATGTGTATATGCCATTTGGAAAAGGCTTACATAATTGTATagGTGAAAGATTTGCTTTGATGAGCGTAAAAGTTGGAATTACATCTCTCTTGTCAAATTATGAAGTAGACCTGTGTTCCAACTCGGAATCCGTCGAAAATGTCAAGTATAATTCTTATGGATATTTACTCGCACCAGTTTCTAAAATTTACATGAAGTTCAATTCTAAACCTTTATTCGACAATGATTTATATATGAGcaattaa
Protein Sequence: MEIKIEPEDCIEIEFDPLHHSIDIKEESTLLEAEVDEEYEGQLSQQFECVCNLKFTDKSEFKKHAKIHSGTNLFEPEADDFKDSTKNHSIQHFISHIKDKRFFCQICDFDCSTKQNLKVHLMNHLGIKPFECEHLMSHTGSEPFVCDICDFKCSTKHRLKKHFMAHTGEKPFSCEMCDFKCSAKQNLKVHLMTHIGEKPLVCEVCDFQYPTRYLLKKHQMTHSEEKPFAGEVVDFECSTQQTFTVHLVSHPREKPFICEVCAFKCPTEYLLKKHLLSHSRKNPLIREIYDFKCSSIGKNPFACDKPDFKYSTKQNLKEELMTRTWEIPFVCEVCNLSCSTKYHLEQHLKSHTKNKSFTCALCDFKCSTRHRLKRHLMSHPRQEPLACEIDDFKCSTKQELKEQCKSHSKEKPTVCEESPSISFYIVGTVVAALLYLYLHLTRNFKYWKNQNIPYVPPTVLFGNIFNICTFQKCMGEFMSDLYNRSTSKILGFFVFDQPFLFIRDPDLIKQLLVKDFEYFSDRTVVSNGENDQFASKMLFTVKNPMWRNLRIKLTPAFTSGKIKNMTALMTDASKGLIGYIDNKLSHANEFDARNLTMMYTTDVISSCVFGIAANSFNNENAEFRAASKKIFELTLTRAVHSVSSFLAPMLFKTFKMRFLDPSAVEFMQKAFIETLHEREKSKEYRGDLIDILVQIKNNEESGSDFDENTLVAQAIQFFAAGFESTGSTSFYCLYELSKNKRVQENLRQEIKSVLKGHKQITYDLIQEMSYLDMVIHEILRKYPILPFVDRQCTKTYRIPDTDVIVKKGMKIYISLTGLHYDSNYFPDPEKFIPERFSPENRSNITSNVYMPFGKGLHNCIGERFALMSVKVGITSLLSNYEVDLCSNSESVENVKYNSYGYLLAPVSKIYMKFNSKPLFDNDLYMSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -