Rlut027585.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- CDC5L
- Assembly
- GCA_958510855.1
- Location
- OY294041.1:5929412-5931691[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-14 5.5e-11 43.4 1.8 3 46 10 54 8 54 0.95 2 2 2.1e-12 2.7e-09 38.0 0.1 1 46 60 104 60 104 0.95
Sequence Information
- Coding Sequence
- ATGACTCGTCCTTACATTAAAGGTGGTATTTGGACGAATACCCAAGATGAAGTTTTAAAAGTAGCTATTAATAAATACGGAAAAAATGAATGGTCGCGTGTTGCATCTTTATTGCACAGAAAATCGGCAAAGCAGTGCAAGGCGCGTTGGTACGAATGGTTAGATCCAACGATCAAAAAAACAGAATGGTCAAGAGAAGAAGACGAAAAGTTACTGCACTTGGCAAAATTAATGCCGACTCAATGGCGTACTATTGCCCCCGTAGTTGGAAGAACGGCCGGTCAGTGTCTAGAAAGGTACGAAAATTTACTAGATAAGGCAGAAGGAAAAGACGACCTCGATGATGACCCAAGGAAATTAAAACCTGGTGAAGTGGATCCTAATCCCGAATCAAAACCTGCACGTCCTGACCCTCAAGATATGGATGAAGATGAGTTGGAAATGTTATCCGAAGCTAGAGCTCGTTTAGCGAACACACAAGGAAAGAAAGCAAAACGTAAAGCTCGAGAAAAACAGATGGAAGAAGCTCGTCGAATAGTAGCCTTACAACGACGTCGGGAGTTGACTGCGGCAGGTATTCAATTATCTTCAAGGCGGAAGAGAAAACGCGGTTTAGATTACAACGCAGAAATTCCTTTCGCAAAACGGCCTGCACCAGGATTTTATGATACGTCCAATGAAGTTGTCGACCCCATGGCCCCCGATTTTACTGTACTTAAGCGCCAACATTTAGAACAAGAATCAAgaagtgaaaatgaaaaacGAGAACGTAAAAAAGATAAGGAAAAACTGAAGCGAATTCCAGTTGAATTACTGCAAAATGAGGAACCAGCAATAAAACGGTCCAAATTGATTTTACCAGAGCCGCAAGTCTCTGATCAAGAAATTCAACAAGTGATTAAATTAGGTAGAGCGAATGAAATTGCCCGTGAATTAGTTATTGATGGTGGTGAAGAAGCTCCTGACTCATTGCTATCAGACTATCACACAGTGATACCGGTTCTGCAAGGTTCATTATCCTCACGTACTCCTGCATTGGTGAACGACCGCATTATGCAAGAAGCTCAAAATATTTTAGCCTTAAGAAATGTGGATACACCTTTATTGGGAGGAGAAAATACAATTATCAATAATGTTAACTTTAGTGGAATGCTTTCACAAGTCGAAGCTGTTTCCACGCCAAATACAGTATTGGCAACGCCGAGTAAAACGGtgagaaataatttgaatatcaactgtgaagaagaaaatattttggatACGATTGATggtcaaaaaaattatcaaactatCATTAAGGAAAAGTTTCGCATTCAAATGGATCAACTTCCACTTCCTAAAAATGATTTTGAAATTGTCGTTCCGGAAGAAAAGGAAGAAGTTTCGTATGTGGATGATTTGATGGTAGTGGAAGATCAAGCCGATATAGATGAAGCACTGATTGAAATGGAACGCGTTGTAGCTGCCCAACAGTTTCGTTTACGGTCCCAAGTTATCCAACGGGGTCTTCCAAGACCCAAAGAGGTTAATCTATCTGTTTTTAGACAAGACTACTCGTCTTTGACGGATTTGGAACACGCGGACGAACAAATAAAGCGAGAAATGGTGACTATGTTGCAGTACGACGATCTTCACCAAGATGGTACTCTCATTGGAAAGAAAAGTGGTTTGAACAATGCCAAACAGCTTGCTTATTTAAAGGAGCATCCATATCTTGATTTTACCCAGGAAGAATTGAAAAGTTCTGAAGAACTTTTAAGAAGTGAAATGGAGGTTGTGGAACGTGGAATGAATCATCCTGACCTCTCCATCGTTGGTTACAATCAACTATCGGAAGAATGTTACGGTGAGGTTTTATATCTTCCATGTAAAAATCGTTACACGCGAGCTGGCTTGGTGAATATGAAAGAAAAATTGGAAGCGGCAGAGCAAAAGTTGGAACAAAATAGAAACCATATGTCTCGAGAAGCTAAAAAGGCTGTGAAAATAGAGAAAAAGATTTCTATTATAAATGGTGGTTATGTAAAACGTGCGGAAACTCTCATCAAGCAGATCCAAGAGACTTATGAGAAAATAGACCAGGATAGTATGGAATTAAGCTCTTTCCGTTTTTTGCAAACTCAGGAGAAAATCGCATTACCGCAAAGAATTCAGTCGTTAACTGAAGATGTTAATAAACAACTGGAACGAGAAAAATTGTTGCAGTCAAAATATGCCGATTTGCATGAAAAATCGACATTACTCTACAAACAGTTTTATCAGAATCAGCAAGAGGATTGA
- Protein Sequence
- MTRPYIKGGIWTNTQDEVLKVAINKYGKNEWSRVASLLHRKSAKQCKARWYEWLDPTIKKTEWSREEDEKLLHLAKLMPTQWRTIAPVVGRTAGQCLERYENLLDKAEGKDDLDDDPRKLKPGEVDPNPESKPARPDPQDMDEDELEMLSEARARLANTQGKKAKRKAREKQMEEARRIVALQRRRELTAAGIQLSSRRKRKRGLDYNAEIPFAKRPAPGFYDTSNEVVDPMAPDFTVLKRQHLEQESRSENEKRERKKDKEKLKRIPVELLQNEEPAIKRSKLILPEPQVSDQEIQQVIKLGRANEIARELVIDGGEEAPDSLLSDYHTVIPVLQGSLSSRTPALVNDRIMQEAQNILALRNVDTPLLGGENTIINNVNFSGMLSQVEAVSTPNTVLATPSKTVRNNLNINCEEENILDTIDGQKNYQTIIKEKFRIQMDQLPLPKNDFEIVVPEEKEEVSYVDDLMVVEDQADIDEALIEMERVVAAQQFRLRSQVIQRGLPRPKEVNLSVFRQDYSSLTDLEHADEQIKREMVTMLQYDDLHQDGTLIGKKSGLNNAKQLAYLKEHPYLDFTQEELKSSEELLRSEMEVVERGMNHPDLSIVGYNQLSEECYGEVLYLPCKNRYTRAGLVNMKEKLEAAEQKLEQNRNHMSREAKKAVKIEKKISIINGGYVKRAETLIKQIQETYEKIDQDSMELSSFRFLQTQEKIALPQRIQSLTEDVNKQLEREKLLQSKYADLHEKSTLLYKQFYQNQQED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01291484;
- 90% Identity
- -
- 80% Identity
- -