Rlut000646.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- -
- Assembly
- GCA_958510855.1
- Location
- OY294036.1:6663163-6665799[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.024 31 5.8 0.1 16 46 284 315 283 315 0.84 2 5 9.9e-09 1.3e-05 26.2 0.1 1 43 321 365 321 368 0.90 3 5 3e-11 3.9e-08 34.3 0.0 1 46 374 423 374 423 0.91 4 5 6.6e-08 8.5e-05 23.6 0.0 1 45 431 475 431 476 0.90 5 5 1.4e-08 1.8e-05 25.7 0.0 3 42 485 524 484 526 0.96
Sequence Information
- Coding Sequence
- ATGGACGATTATGATTTTACAAACGACATTCAGTCAGAACTTGATAGTTATTTTCGGAATAATCCAATCGCAAGTGACTATGAAGAAAATCTGGATGATGACATTATTACTGATTATAACGATGACTTTGATCATCTCGATGAAGATGATACGACAAACTTATTTAGCGACGAAGATGATGAAGATGACGAAGGCGACATCAGCATGTCAGAAGAAAACGATACTGAAACTTTAGGGCAGATAATGTTACAACTTCAATGCGATTTTGAAAATTCGGTTTTGAACGACTTATCCACAACACAGCTAAATTTAACCCCCGAAGAAATTGGAGTTTTAGAGCGCTGCCAAAATCCACAACTGAAGAGATTGCTTCTGCTGAATCGGCTAAAATCTATGCAATGTGAAGAACTCATTAAGAAAGTTAAACACGCTCAAGATATTTGCATCAAAACAAAACTCGGTAAGCAGAAATCTAAAAAAGATCCAAATATGTATGATGCACATACCTCAAACACATGGAAATTGGGATTTccatattttaagaaaagtaGTAAGGACATTACTCCCAAATACAATCCAGACTATCACAAAAAGGTAGCTAATCATGAGTTGGTGAACACATCTTTCATCGATGGTAGACGGTGGAACCATAACGATCAAATTGCACTCTATAAATCTGTATGTGGTAATCACCGCATTtacagaaaaaaatatttgcaacaGCAACTAAGGTCTACAAAAAAAACTTATAGTGTAAATCCGATACCTACAGTTCGGAAGGAAATTAAATCATTGAACAAGCAACTGAAAGCAATTGAAAATGAAACGGAATACATAACACCACCTTTGCATAACGAATCGGGAATAAATTGGTTATCGGTAATCAACGATTTGCATGACCGGCACTCATCTGTTGAATGCAAATCATTTTGGCGCATATATTTACACCCCGatataaataaaaccaattggtccaaagaagaaaataaaaatattcactccttggtaataaaatacaattttcaaaattgggaTGCGATTGCAAGGGAACTTGGAACTAACAGAACTGGATTTTTGGTAATAGTTCACTACTTTACCAAGTTATGCGATAAATTTAGAAGACAGAAATTTTCACCAGAAGAAGATgaacaaattgtaaatttggTTGAAGAACAGCGTATGGGGGCCAGGATACCTTGGTCAGCCATCGCTACAAATCTTATCGGACGTTCTAAACTTCAAATTTATCACAGATATATTTATTACCTATTGCCGGAGAAAGGTAATAAAAAAGGTATCTTCACTGAATCAGAAGATATATTACtatgtattttaattgaaaaatttggaaaaaattacaAAGCAATTGctgatattatgaagaatcgtaCTAGTATGCAATTAGGTTGCAGATACAGAGACCATTTGGAAAATATGACCTACTATCTGCTTCCTTTTAGCATTGAAGATGATCGTGAAATAATGAAGCACGTTGAAGAAAATGGCGCAAAAAACTGGAGAGCTGTGGGGGACCGACTTAAAAAAAGTGGTAAAAGTGTGAAAGAtcgtttcaaaattataaaaaaatatgttgaaaggAATGTCAAAATCGAAGATGTTCCAAGACCTAGAAGAAATTACTTTCAAAGTACTCTGAACAAACGTATCGATAACTTGCAAGGGGTTTTGAGAGAAATCAAAAGAAATGTCGATGGTATTCCCACTTTAAAAACAGTCGAACGTTACTTAAAGCGTTACCAATTGGAGAAACAAAGCATGCAAGTGTGCAAAACTTACAAAAAGAAAGAACCAAGTATAGCTGATCAACAGTTGATCGAGTTTTTTATGAAGAGAAATCAAAATGAGAATCTAGAAATTGTTAAACCTTGCGAAATAGTTTCCAATAATGATTCTCTCAATCGTATCACCAagttgttgttattatttggtTCAAGCGAAACTTTGTTTGGTAAGTCTGATCCTCATGGTTTATCAAAAGCGGGTAGTTTTGATCTGATGGTAGAAATTAAAACCTTGTATCACCAAAATTATGCTCATAAAGCCAAGCCTTCCTCGCTTGTTTCATTTGAAGCCAACAAAATTTACGAAATTTTACCACCCAATGTTTGTAGCGTGACTGGTTTAAAGCATCTTTTCATCAACTGTGAAGAAATGCGATTCAACAATcagaatttcaaaattgatgaaCAACGCAGTTTTGATTGGATTGTAATGCAAAATTTAGCACAAGTAGACGAAGCAACGAAAAGCAAGATCCTAAAGGaacgaaaattattttttaccagACTTTTGGCAGTCTTCAAGTGGCCTGTAATTTTGTCTCTCAATGATCCATCCGAAAAAGTTATAGTACAAGAAAAGAAGGAAGAAGATGAAATTATAGAAGTACCTAAGATGTTGCAAGCTAAAAGTAGTAAACGGTTGTTAGATGACGATTCTGATGAAGATTCCGATGAAGATTTTAATATCGGGGAAGATGAATGGAGGAGCACAAAACGTGCAAAAATAGTAGAACCtgttaaatattatcctggTCGAGTACCAGTTCCGCAAATCAGTGACCGAAAAAATCTAAGTACACaatgtttcttttttttgggtACATGTCCACCTTAG
- Protein Sequence
- MDDYDFTNDIQSELDSYFRNNPIASDYEENLDDDIITDYNDDFDHLDEDDTTNLFSDEDDEDDEGDISMSEENDTETLGQIMLQLQCDFENSVLNDLSTTQLNLTPEEIGVLERCQNPQLKRLLLLNRLKSMQCEELIKKVKHAQDICIKTKLGKQKSKKDPNMYDAHTSNTWKLGFPYFKKSSKDITPKYNPDYHKKVANHELVNTSFIDGRRWNHNDQIALYKSVCGNHRIYRKKYLQQQLRSTKKTYSVNPIPTVRKEIKSLNKQLKAIENETEYITPPLHNESGINWLSVINDLHDRHSSVECKSFWRIYLHPDINKTNWSKEENKNIHSLVIKYNFQNWDAIARELGTNRTGFLVIVHYFTKLCDKFRRQKFSPEEDEQIVNLVEEQRMGARIPWSAIATNLIGRSKLQIYHRYIYYLLPEKGNKKGIFTESEDILLCILIEKFGKNYKAIADIMKNRTSMQLGCRYRDHLENMTYYLLPFSIEDDREIMKHVEENGAKNWRAVGDRLKKSGKSVKDRFKIIKKYVERNVKIEDVPRPRRNYFQSTLNKRIDNLQGVLREIKRNVDGIPTLKTVERYLKRYQLEKQSMQVCKTYKKKEPSIADQQLIEFFMKRNQNENLEIVKPCEIVSNNDSLNRITKLLLLFGSSETLFGKSDPHGLSKAGSFDLMVEIKTLYHQNYAHKAKPSSLVSFEANKIYEILPPNVCSVTGLKHLFINCEEMRFNNQNFKIDEQRSFDWIVMQNLAQVDEATKSKILKERKLFFTRLLAVFKWPVILSLNDPSEKVIVQEKKEEDEIIEVPKMLQAKSSKRLLDDDSDEDSDEDFNIGEDEWRSTKRAKIVEPVKYYPGRVPVPQISDRKNLSTQCFFFLGTCPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01291481;
- 90% Identity
- -
- 80% Identity
- -