Basic Information

Insect: Rhagonycha lutea
Gene Symbol: ct
Assembly: GCA_958510855.1
Location: OY294039.1:24485860-24516620[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.8e-27 7e-23 81.4 0.0 3 72 371 441 369 446 0.94

2 3 2.4e-32 3e-28 98.6 0.0 2 76 753 828 752 831 0.96

3 3 8.5e-31 1e-26 93.7 0.0 3 77 984 1059 982 1061 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.8e-27	7e-23	81.4	3	72	371	441	369	446	0.94
2	3	2.4e-32	3e-28	98.6	2	76	753	828	752	831	0.96
3	3	8.5e-31	1e-26	93.7	3	77	984	1059	982	1061	0.96

Sequence Information

Coding Sequence: ATGCAGTggtataattttttatctaCTGCGACATTTATTATTCATCAGGATAAGaGAGCGACCCTTGCTGAAAAGGAAGTTACTACTTTAAAGGAACAATTAGCCACTGGTAATTCAGGTTGTGATACAAAGGAGGGAAATATGGataaaccaaattttgaaaacgaaCTCGCTGCCAAAGATAAAGAAATAAGTCAACTATTAGAAGAAGTACAACGCCTCCAATTAAGTATTACTAAACTACAAGAATCTTCTATGTCACAAATTTCTCGACTAGAAGAAGAACTAGAACAGAAAAGACAACTTACAAACAGATTAGAAGCAAAACTAGACGTTCAAAAGGATTACGATGATCTCCAACGGGAAATTAGTATACTGAGGTCAGTTAATTTTTCATCCAACAACCCTGAGAGTAAATCTGTAGAATTATTATTGGAGAGATCCAGGAGTGAAGCTTCCGAATCGACTGCGCCAGTTCAAGACAACGAAGGAGGTGCAAATCCATCATCAACACAACCTTCAGAGTCACCTTCAGGTCTTCCTAAATCGCCCTTAAACAATTCCCTTCCTCCGCTTTTTCAAAACGTCGAGACATTCGGTACAATACTCGGCGAAGAAATAGTTGCAACTTGGCGACGAAGCATCGAACAAATAACCTTAAATAACCGAATAATATCCTCCTCACCCTCTGCAGATGGACCTGTTAAAGCTACAACGCCGGTAGTGGCAGATTCTACAGAAAAGAGCACAGCGTCGACGCCACAACCAGTCGAATCGGTTTTTGGACCACAAGCGTCTCCCGTCGAACCTCTCCTTAACGGCAACCCAAAAAGTCCCGAAGATAACAACAACCAACACCTCAGCAGCAACAACAACGTACCTTTAGCAGCCACCATGTGTGCCGTAAATAACTTCCTTAGAAACGAGGATTCGCTCAAGAGTCCGTACCGATTCGAAGAGCACAGACCGTCGTTTCGGTTTTCAGACGAACTCGGATTACCACCCGGTTCCATGGTTGGCAGGTTAGGCGAAAGCCTCATCCCAAAAGGCGACCCAATGGAAGCGAGGCTTCAGGAAATGTTACGGTACAACATGGACAAGTACGCCGCGCAAAACTTGGATACGCTACACATATCTCGACGGGTTCGGGAACTTTTATCGATACACAACATCGGCCAAAGACTATTTGCAAAATATATCTTGGGCTTGTCGCAAGGAACCGTTTCCGAATTGCTATCTAAACCGAAACCTTGGGACAAGCTTACCGAAAAAGGTCGGGACAGTTACAGAAAAATGCACGCTTGGGCTTTGGATGAACACGCTGTCATGCTTCTAAAATCTCTTATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGAAACCGGCATTCCAAACTTTGGCCGTCCTGAAAATGAAATGACCGACGAAAGGATAGTGCATATCTTAAACGAAGCTTCTCACTTGCAAATGAAACCTCAACTCGAAGACAGCCGGAGTAACGACGATTCCAGATCACCGCACGGCGGATGCATCAGTCCATTCTCGAGGGAattgcaaaaacaaaaattaaaaaagtacgAAAACGACGACATCCCGCAAGAAAAAGTTGTGAAAATTTATCAAGAAGAACTCGCCAAACTAATGGGTAAACGCATCGAAGACTTTAGAAGAGAACCATTTCCTGGCATGTTTTTTCCACACATATTTAGTGGGGGTCCGATGGATCGAACGCAAGAAGAAATTCGTATGGCGTTAGACGCTTACCATCGCGAGTTGTCAAAATTAAACCACTGCCAAAATTCCGCACAAATGACAAATTTAGGCTTGCTGGCTTTGCAGCAACAAGCTCTCGCTCAACATCATAATCCTTCCATGAATGGTGGAGCACAAGACTTATCGCTTCcaaaagaaaaatcaaaaatgttgaaCGGGATGGACGAAAAAGAAAAAGAATCGGATGATAGTATTAAACATTCTGGTAGTGCATTTAGTTTAGTTAGACCAAAAATAGAGCCCGGAACTCAATCCCAAACGACAAGTTCGACGGCATCTAGTCCATTAAGTAACAGTATTCTACCTCCCGCGATGACGCCGACTGACGAATTTTCCACATCCGCCACCGCCAGTCCACTACAACGAATGGCTTCCATTACAAATTCCTTAATTTCGCAACCACCCACCCATCAGCATCATTCTACAAGTCAGCGACCGCTAAAAGCTGTCTTGCCGCCAATCACCCAACAACAGTTCGACGTATACAATAACCTAAACACGGAAGACATAGTCAAAAAAGTGAAAGAACAATTAAGTCAGTATTCTATAAGCCAAAGATTATTTGGTGAAAATGTTCTTGGTCTGTCCCAAGGATCCGTGAGCGACCTACTAGCCCGGCCTAAACCTTGGCACATGTTGACCCAGAAAGGAAGGGAGCCTTTCATACGCATGAAAATGTTTCTGGAAGACGACAGCGCTGTTCACAAATTGGTAGCTAGTCAATATAAAATTGCGCCCGAGAAGTTAATGCGAACTGGTGGATACGGTGGAACACCTTGTGGTACGCCCCTCGGTACGGTCCTTAATAAACCTCTACCGCCGACCCAAAAAATGTTGAGCGAAGCCGCAGGTTTCCTAACTAAAATGCAGGAAAATCCAAATTTACTTCCGCCGTCGTTACAAATGGTTTCGGCCCAAAACCAAATGTTAAATCAACCTCACGGACCACCGATGCTACTCACGCCGCCTGGTATTCCACCACAACATCCCATTAATTTACAAACGCCCGAACACATAAAGAAACAAACTTCGAGTCCACACACCGTTCCACACACAGTTCCACACACCGTTCCACATGCAGTTCCACATTCGCCTTTATCACATCACCAAAGTGCAAATTTAAGAAGTCTGAATCCACATATTTCGCCTAGCGTTTACGAAATGGCGGCGTTAACGCAAGATTTAGACACCCAAGTGATAACCACCAAAATTAAAGAAGCTCTTCTTGCCAATAACATCGGACAAAAAATATTCGGCGAAGCGGTGTTGGGTTTATCGCAAGGATCCGTTAGTGAATTATTGTCTAAACCAAAACCGTGGCATATGTTGAGTATAAAAGGTCGCGAACCGTTCATTCGAATGCAGTTGTGGTTAAACGACGCCCACAATGTCGAAAGACTGCAAGTGTTGAAGAATGAACGTCGCGAAGCAAACAAAAGACGTCGTTCCACGGGCGCGGGCGCACACGACAACAGTTCGGATACTTCTTCGAACGATACCTCAGAATTTTATCATTCCAATTCGCCTGGCCCTGGACCGCCATCGGCCAAAAAGCAACGAGTTTTGTTTTCCGAAGAACAAAAAGAAGCTCTTAGACTGGCATTTGCACTTGATCCGTATCCAAACGTAGCAACTATAGAATTTTTAGCGGGAGAGCTTGGTCTCTCCAGTAGAACTATAACAAATTGGTTCCACAACCACAGGATGAGGTTAAAACAACAAGCGCCTCATGGTATGCCCGCCGAAGTTCCACCACGTGACCAAAGTGGAAACCAAGCACCTTTCGATCCCGTTCAATTTAGGCTGTTATTAAACCAAAGATTATTAGAATTATCGAAAGAACGAATGGGATTGGGTGGAATGCCTTTACCTTATCCTCCATACTTATCAACCAATCCAAATTTAGCTGCTTTAATAAGAAATGTAGTGAAAGAACAAATGAGTGGGTTAGACTTATCTATGACTTCTTTGAAAAGAGAACCGGACGACTTTGAAGACGACGCGGAAAGTAACGTGGGTTCGGAAGATTCCAACATGTCGGACAGTATGCACGGCGAAGTAAAGTCTGAATTGAATGAGAAACCGTTATCGCAAATCGGAAGTCAAGGTCGATCGTCCAGAAGAAAACCTGCGGCTCCGCAGTGGGTGAATCCAGACTGGCAGGACGAAAAAGATACTAAACAGGCGTCGGGTAGTGAAGTGATAATTAACGGCGTTTGCGTTATGCAGACGGAAGATTATGGGAGAAGAAATTCTGAAGAGACTGTTCATGTGGAGCCTACTCCTGTAATGGATAGGTTTGACGATGATCAGAGTGACGCGTCGTCGGTTAGTCACGAAAACGAGTTAAATACGGAACAAAATGACGATAAAGAAAATGAAGACAATGTGAAAGATACGAGTGAACGACAAAGTACAAGTGAAGATagtgaaaaatgtattaaacaaGAAAGCGACGATAGATGGGATTATTAA
Protein Sequence: MQWYNFLSTATFIIHQDKRATLAEKEVTTLKEQLATGNSGCDTKEGNMDKPNFENELAAKDKEISQLLEEVQRLQLSITKLQESSMSQISRLEEELEQKRQLTNRLEAKLDVQKDYDDLQREISILRSVNFSSNNPESKSVELLLERSRSEASESTAPVQDNEGGANPSSTQPSESPSGLPKSPLNNSLPPLFQNVETFGTILGEEIVATWRRSIEQITLNNRIISSSPSADGPVKATTPVVADSTEKSTASTPQPVESVFGPQASPVEPLLNGNPKSPEDNNNQHLSSNNNVPLAATMCAVNNFLRNEDSLKSPYRFEEHRPSFRFSDELGLPPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYAAQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWALDEHAVMLLKSLIPKKDNFSSGKETGIPNFGRPENEMTDERIVHILNEASHLQMKPQLEDSRSNDDSRSPHGGCISPFSRELQKQKLKKYENDDIPQEKVVKIYQEELAKLMGKRIEDFRREPFPGMFFPHIFSGGPMDRTQEEIRMALDAYHRELSKLNHCQNSAQMTNLGLLALQQQALAQHHNPSMNGGAQDLSLPKEKSKMLNGMDEKEKESDDSIKHSGSAFSLVRPKIEPGTQSQTTSSTASSPLSNSILPPAMTPTDEFSTSATASPLQRMASITNSLISQPPTHQHHSTSQRPLKAVLPPITQQQFDVYNNLNTEDIVKKVKEQLSQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDSAVHKLVASQYKIAPEKLMRTGGYGGTPCGTPLGTVLNKPLPPTQKMLSEAAGFLTKMQENPNLLPPSLQMVSAQNQMLNQPHGPPMLLTPPGIPPQHPINLQTPEHIKKQTSSPHTVPHTVPHTVPHAVPHSPLSHHQSANLRSLNPHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVERLQVLKNERREANKRRRSTGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQAPHGMPAEVPPRDQSGNQAPFDPVQFRLLLNQRLLELSKERMGLGGMPLPYPPYLSTNPNLAALIRNVVKEQMSGLDLSMTSLKREPDDFEDDAESNVGSEDSNMSDSMHGEVKSELNEKPLSQIGSQGRSSRRKPAAPQWVNPDWQDEKDTKQASGSEVIINGVCVMQTEDYGRRNSEETVHVEPTPVMDRFDDDQSDASSVSHENELNTEQNDDKENEDNVKDTSERQSTSEDSEKCIKQESDDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00950619;
90% Identity: iTF_00950619;
80% Identity: iTF_01293487;