Rlut010825.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- kn
- Assembly
- GCA_958510855.1
- Location
- OY294037.1:58588350-58592259[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-129 9.4e-125 418.1 16.6 205 561 1 335 1 345 0.85
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAAGTTGTTATTGCTACTCAAGTGAGCGTCGAGGGACCACTATTGGCTATTTCCGATAACATGTTTGTGCATAATAATTCAAAACATGGGAGAAGAGCAAAAAGGCTGGATCCCTCCGAAGgTTTATATCCCCCTCTACCCGTAGCAACCCCCTGTATCAAAGCCATCAGTCCGAGTGAAGGATGGACTTCGGGTGGATCCACCGTCATTATCGTTGGAGATAACTTCTTTGACGGATTACAAGTCGTATTTGGGACCATGTTAGTTTGGAGTGagttaataacgcCACACGCAATACGAGTTCAAACACCTCCGAGACATATTCCAGGAGTAGTTGAAGTTACATTATCATATAAATCAAAGCAATTCTGTAAAGGGGCACCGGGCAGATTTGTATATGTTTCCCTAAATGAACCAACAATAGACTACGGATTTCAAAGATTACAAAAACTTATACCGAGGCATCCGGGCGATCCAGAAAAATTACCTAAAgaaattattttgaaaagagCGGCGGATTTAGCCGAAGCTTTATACACAATGCCCCGAAATAATCAGTTATCGCTTACGGGGCCAAGATCACCAACAATGGGAAACAATGGAATGACACCGACATTTAACACGTACACAGGGCAGTTATCAGTCAGCGTTCAGGACAGCGGAAACGGTCAGTGGACAGAAGAGGATTATGGAAGAACTCAAAGTAGCAGTGTATCGCCCAGAGGTGGTGGCTATTGCTCCAGCGCATCCACTCCTCACTCATCCAACGGTGGAGGATCCTACGTAGGCAACATGAATAGTTATGGCAATTCGACTCCAACAAGTAGTTCACAATTATCCAACATGATATCCGGCGCACCATCGCCAGGGATATTTAATTCAACTCCAAtttCTCCAGAGTCGAGTCATTATCATTTTGGCGCACACAACCATAAACCGGACAAAGAGAAAAGCGCGTTCGCCCCGGTGATACGGGGAAACTCGACCTCCCCTGCTCACCCACCGGCACCCGCGCTTTTCCACCATCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAATGttag
- Protein Sequence
- MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLTGPRSPTMGNNGMTPTFNTYTGQLSVSVQDSGNGQWTEEDYGRTQSSSVSPRGGGYCSSASTPHSSNGGGSYVGNMNSYGNSTPTSSSQLSNMISGAPSPGIFNSTPISPESSHYHFGAHNHKPDKEKSAFAPVIRGNSTSPAHPPAPALFHHQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00429627;
- 90% Identity
- iTF_00464450;
- 80% Identity
- iTF_00272246;