Rful031655.1
Basic Information
- Insect
- Rhagonycha fulva
- Gene Symbol
- -
- Assembly
- GCA_905340355.1
- Location
- HG996555.1:73625891-73626690[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-07 7.7e-05 23.2 0.0 17 41 1 25 1 28 0.90
Sequence Information
- Coding Sequence
- ATGTCGGTGAAAAAGGCATCGAAAACTTATAACATTCCAAGAAGAACTTTGCGTCAATTTATTGAAAAAAACATTGATATTAAAGGGCGAGTAGTAGGAAATGCAATACCACCAATGCTCTTGTTCAAAGGTCAACGTTTTAAAAAGGAATGGTTGCTGGATACGACACCTGGAACTGCAGCTGAAATGACAATTACCACTTTTATAAAATGGTTGCGCCATTTAGCTGAATATAAAAGTCCCCGACCTGCTTTAGATTATTTAGATTTAGATTATTCCATTGTCAACGAAGCAGAAAGATGTCAGATTGTGTTGTATTGTCTGCCCAGCAACTAA
- Protein Sequence
- MSVKKASKTYNIPRRTLRQFIEKNIDIKGRVVGNAIPPMLLFKGQRFKKEWLLDTTPGTAAEMTITTFIKWLRHLAEYKSPRPALDYLDLDYSIVNEAERCQIVLYCLPSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -