Rful014839.1
Basic Information
- Insect
- Rhagonycha fulva
- Gene Symbol
- retn
- Assembly
- GCA_905340355.1
- Location
- HG996557.1:18590210-18590887[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-24 4.1e-21 76.0 0.0 2 89 115 200 114 200 0.96
Sequence Information
- Coding Sequence
- ATGCAATTGCCATCGGTTATAGATAATCACAACGACGTAATTAATAAATTAAAGATGCAGGTGCGAGACATAAAGGATCAATTTGACGAAAGACAGTTGCATTTTCCTTTATCGAATCGGCTACAAACAGGCATGAGAGACGACGTTCTTCCATTAGCTTTGTCCGGATTTCCATTTCAACATCCAGGTTCGTTTATGCCTCCACTTCCACAACAACATGCAGCTCCTTCGTCGGGAAGTTCACATTCTTCGGAAGGAAGTGCACCTTCTCCACAAACTTGGTCATTCGAAGAACAGTTCAAACAGGTGCGTCAGTTATACGAAATCAACGACGATCCAAAGAGGAAAGAATTTTTAGATGATCTCTTCTCGTTCATGCAAAAGAAAGGTGCACCCATCAATCGGTTACCAATAATGGCCAAATCGGTCTTAGATTTATACGAATTGTATAATTTAGTTATAGCAAGAAGCGGCTTGGTGGACGTAATAAACAAGAAACTGTGGCAGGAAATCATCAAAGGATTGCATCTTCCTTCCTCCATCACATCGGCAGCATTTACTTTAAGAACACAATACATGAAATACCTTTATCCATATGAATGCGAGAAGAAACGTTTGTCGACGCCCAACGAATTACAAGCAGCCATCGACGGCAATCGAAAACGTAGAAGATTTTGA
- Protein Sequence
- MQLPSVIDNHNDVINKLKMQVRDIKDQFDERQLHFPLSNRLQTGMRDDVLPLALSGFPFQHPGSFMPPLPQQHAAPSSGSSHSSEGSAPSPQTWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKKGAPINRLPIMAKSVLDLYELYNLVIARSGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKRLSTPNELQAAIDGNRKRRRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -