Rmor041843.1
Basic Information
- Insect
- Rhagium mordax
- Gene Symbol
- pnr
- Assembly
- GCA_963680705.1
- Location
- OY796662.1:4267395-4271449[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 8e+03 -1.6 0.0 7 14 200 207 198 212 0.79 2 2 1.4e-17 1e-13 52.4 4.4 1 35 330 363 330 364 0.98
Sequence Information
- Coding Sequence
- ATGTGCCAGTCCGAAGACCTCCTCGACGACCTAACCGCATCTTTGCCAATTAAACCAGAAGACTTAAAAACAGAATCAGCCGAATTACCTTGCAGTATTACACAAGAAATTAAATCGGAACCCGAATTTACGATAAAGCCAATACCAGAAGAAGAGCCTGAAAGCGCCCCGCTTCCAGACAATAACCCTCCACAATCAGAACCGTTTAGAGAATCTCCAGGGGAAGCTCCAATAATAAAAGTGAAACCACCTAGCGCTCTGCAGTATCCTGTGGAGGAGCCACCAGTTTTGCCGGCCACACCTAGAGTCCTGAGTCAGGATGTTACGGGCTTTATGGATACCCAGGCGGATGTGGAGGGGAGGATAAGTCCAGTGGAGGAGCCGGCAGATCTGTCGAATAAACGACCAGAGACTTTAACTTGTGTGCCTGAAATTGACTTTATTAAAGAAGAAGCCGataatgtttctgtttatagcaaTAGTTCTGATCCGGAGCGATTGGAAGTGGACATGTCACAGGCGGCAGAAGAACATAGCAACTCGACAACGCACAGCGAGGCTTCCCCTACCCCCGAATCCGCTCAAAGAGACAACGAATCTGACTCTTCCCTTTGGCGTGCTCTCTCCCAAAACGGCTACAATCCATCCGCTCCACTCTCCGGAGAGGCCAGTCAATTACTTAGGAAACTCATTACTTGCCGGAAACTAGGAATGAGTATTACGCCAGCACCTCCACATGTCCTTAATTACACACTTTTCCAAGACCAGCAAAGATCGCTGCAAGCGTCAGCTTTGAACATGGAAAAGAGCTCAGCTAGACGGAAACAAAGTTTTCCAACCAAGGCCAGCGTGCAAGTGGAGGGGTCTCCGATGGACCAGGAGAAGGATGACGAGGACTATATTCCCGATTTTTCCGGGAACAGTCCTTGGTGTACCCTAGTGAAAGGAAAAggTGGACCAGGTATGGCAAGAAGGGTAGATCTATCGTGTACAAACTGTGGAACGCAAACGACAACAATCTGGCGGCGAAACATGCGAGGCGAAATGGTGTGCAACGCTTGTGGACTCTACTACAAACTGCATGGTGTTGACAGGCCCCATACTATGAGGAGGGACACCATCCACACCAGACGCAGACGACCAAAAGCTACGGATTCAAAAGATAGAGAGTACAATCAGTTTAATGGGCCTATCAATACTTACAAAGGTAAGCTGATCAAAGTTCTAGCTCCAAAAGGGAAAACTAACAACACAGAAACAACAGACACAGAAGACATGTTGAGTGCTCTAAGAAGGCAAATTCAGCCGCATCTTGTAATGGCACTGCAAGGACATAAAAACACAAACGCCCCCAGTTTCCCGCATCTACAGGGTCCACCTTTATCGAAATTCTTGCCTACAGGGGAGTCTCCAAGCGGTTCCGCACCAGAAGTTGAGTCCGACGAAGACAGTATAGCGGACTTACCACTGAATCTCGTCTCGACGCAAATGACAGAAGCCGAATtacattaa
- Protein Sequence
- MCQSEDLLDDLTASLPIKPEDLKTESAELPCSITQEIKSEPEFTIKPIPEEEPESAPLPDNNPPQSEPFRESPGEAPIIKVKPPSALQYPVEEPPVLPATPRVLSQDVTGFMDTQADVEGRISPVEEPADLSNKRPETLTCVPEIDFIKEEADNVSVYSNSSDPERLEVDMSQAAEEHSNSTTHSEASPTPESAQRDNESDSSLWRALSQNGYNPSAPLSGEASQLLRKLITCRKLGMSITPAPPHVLNYTLFQDQQRSLQASALNMEKSSARRKQSFPTKASVQVEGSPMDQEKDDEDYIPDFSGNSPWCTLVKGKGGPGMARRVDLSCTNCGTQTTTIWRRNMRGEMVCNACGLYYKLHGVDRPHTMRRDTIHTRRRRPKATDSKDREYNQFNGPINTYKGKLIKVLAPKGKTNNTETTDTEDMLSALRRQIQPHLVMALQGHKNTNAPSFPHLQGPPLSKFLPTGESPSGSAPEVESDEDSIADLPLNLVSTQMTEAELH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887112; iTF_01370666;
- 90% Identity
- -
- 80% Identity
- -