Basic Information

Insect: Rhagium mordax
Gene Symbol: VEZF1
Assembly: GCA_963680705.1
Location: OY796656.1:102745785-102755238[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 3.7e-07 4.2e-05 25.6 1.4 1 23 21 43 21 43 0.98

2 28 0.0045 0.51 12.7 3.2 1 23 49 71 49 71 0.98

3 28 0.0023 0.27 13.6 0.8 2 22 78 98 78 100 0.90

4 28 5.6e-05 0.0063 18.7 0.3 1 23 105 127 105 127 0.98

5 28 0.057 6.5 9.2 3.1 2 23 138 160 137 160 0.95

6 28 5.7e-05 0.0065 18.7 1.4 1 23 167 189 167 189 0.98

7 28 8.8e-07 0.0001 24.4 0.4 2 23 196 217 195 217 0.97

8 28 2.5e-06 0.00028 22.9 2.8 1 23 223 245 223 245 0.97

9 28 0.0043 0.49 12.7 2.4 2 23 290 311 290 311 0.96

10 28 5.3e-06 0.0006 21.9 1.7 1 23 317 339 317 339 0.98

11 28 0.0079 0.9 11.9 1.7 1 23 345 367 345 367 0.98

12 28 0.002 0.23 13.8 0.6 2 23 374 396 374 396 0.95

13 28 0.00012 0.014 17.6 1.2 1 23 401 423 401 423 0.96

14 28 0.047 5.4 9.5 3.2 2 23 434 456 433 456 0.94

15 28 5.7e-05 0.0065 18.7 1.4 1 23 463 485 463 485 0.98

16 28 3.1e-06 0.00035 22.6 0.7 2 23 492 513 491 513 0.97

17 28 2.5e-08 2.8e-06 29.2 1.6 1 23 519 541 519 541 0.98

18 28 0.0013 0.15 14.4 0.2 1 23 547 570 547 570 0.97

19 28 0.00083 0.094 15.0 4.6 3 23 605 625 603 625 0.96

20 28 0.0002 0.023 16.9 0.5 1 23 631 653 631 653 0.98

21 28 0.0075 0.85 12.0 0.9 1 23 661 683 661 683 0.98

22 28 1.2 1.4e+02 5.0 2.1 2 23 690 712 690 712 0.94

23 28 0.2 22 7.5 6.6 1 23 717 739 717 739 0.93

24 28 0.0001 0.011 17.9 2.0 2 23 750 772 749 772 0.97

25 28 5.7e-05 0.0065 18.7 1.4 1 23 779 801 779 801 0.98

26 28 2.5e-06 0.00028 22.9 0.8 2 23 808 829 807 829 0.98

27 28 9.5e-08 1.1e-05 27.4 1.3 1 23 835 857 835 857 0.98

28 28 0.0089 1 11.8 0.6 1 23 863 886 863 886 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	3.7e-07	4.2e-05	25.6	1.4	1	23	21	43	21	43	0.98
2	28	0.0045	0.51	12.7	3.2	1	23	49	71	49	71	0.98
3	28	0.0023	0.27	13.6	0.8	2	22	78	98	78	100	0.90
4	28	5.6e-05	0.0063	18.7	0.3	1	23	105	127	105	127	0.98
5	28	0.057	6.5	9.2	3.1	2	23	138	160	137	160	0.95
6	28	5.7e-05	0.0065	18.7	1.4	1	23	167	189	167	189	0.98
7	28	8.8e-07	0.0001	24.4	0.4	2	23	196	217	195	217	0.97
8	28	2.5e-06	0.00028	22.9	2.8	1	23	223	245	223	245	0.97
9	28	0.0043	0.49	12.7	2.4	2	23	290	311	290	311	0.96
10	28	5.3e-06	0.0006	21.9	1.7	1	23	317	339	317	339	0.98
11	28	0.0079	0.9	11.9	1.7	1	23	345	367	345	367	0.98
12	28	0.002	0.23	13.8	0.6	2	23	374	396	374	396	0.95
13	28	0.00012	0.014	17.6	1.2	1	23	401	423	401	423	0.96
14	28	0.047	5.4	9.5	3.2	2	23	434	456	433	456	0.94
15	28	5.7e-05	0.0065	18.7	1.4	1	23	463	485	463	485	0.98
16	28	3.1e-06	0.00035	22.6	0.7	2	23	492	513	491	513	0.97
17	28	2.5e-08	2.8e-06	29.2	1.6	1	23	519	541	519	541	0.98
18	28	0.0013	0.15	14.4	0.2	1	23	547	570	547	570	0.97
19	28	0.00083	0.094	15.0	4.6	3	23	605	625	603	625	0.96
20	28	0.0002	0.023	16.9	0.5	1	23	631	653	631	653	0.98
21	28	0.0075	0.85	12.0	0.9	1	23	661	683	661	683	0.98
22	28	1.2	1.4e+02	5.0	2.1	2	23	690	712	690	712	0.94
23	28	0.2	22	7.5	6.6	1	23	717	739	717	739	0.93
24	28	0.0001	0.011	17.9	2.0	2	23	750	772	749	772	0.97
25	28	5.7e-05	0.0065	18.7	1.4	1	23	779	801	779	801	0.98
26	28	2.5e-06	0.00028	22.9	0.8	2	23	808	829	807	829	0.98
27	28	9.5e-08	1.1e-05	27.4	1.3	1	23	835	857	835	857	0.98
28	28	0.0089	1	11.8	0.6	1	23	863	886	863	886	0.97

Sequence Information

Coding Sequence: ATGTTCAAAGATGCACAAAGACTCAAGAATCACCTTGAGTCCCACAAGAGCGACAGGCCATTTTCGTGTGATGTTTGTGACAAAAGATTCAAGAAGAATTACCAACTATCCGCACATATGCGAGTGCATAATGGTTCGATGTCATTTGAATGTGACTTTTGCTCAAAGAAACTGAGATCCAAGAGTTCATGGATGACACACAGGAAACGACATCTCAAAGATTATGTCGCCAAATGTGAAATATGTGATCAAGGATTCTTCACCAAGCAAGAACTTAGTAACCACATGGGTTTTAAACATGGAACTAGTAATTATATTTGTAACATTTGCGGCAGAAGTTGCTATGACAGAGCTGCCTTGCAAGGCCATATGGCACGTCACGCTGAAGATTATGAAAATAACCAAAGCATAAGATGTGAATTGTGCAACAAGTCTTTCCTCCAAGAAAGATATCTTAAGCATCATTTTATGAGAATGCACAAGGATGGCGGTCAAAGTTTCGTGTGTGATCATTGTGGGAAAAAAGTAAATTCAAAAAGGAGCTTACGAGATCATTTGCTCATTCACGAAGGACTCAAACCAATAGAATGCAAAGAATGCGGAAAAAGTTTTGCTTTACGAACTACTTTAAATGTACATATGCGTACGCACACGGGAGATAAACCTCACGAATGTCCAGAATGTGGAAAATGTTTTACACAAAGAGGACCCTTGAAAACTCACATGTTATATCATACAGGAGAAAGACCGCATACATGCGAGATTTGTTCTATGGGgtcCAACGGAGAAAAACCGAAAATagtaatattagaaaatttGCTGGGCAAATTTGAACTGTCAAATGTCGATAAATTAGGAAAATTAAGAAGTTGCAATCTATGTGGGAAATTGTTCAAAGATACGCGAAGACTCAGGAAACATCTTACTTCTCATAGTAACGAAAGACCATATGCGTGTGATCTTtgcgataaaaaatttaagagaaaacaTGAAGTATCAGCTCACATGCGAGTTCATGATGGTTCAATGTCCTTTGAATGTGACTTTTGCTCAAAGAAACTGAGATCAAAGGGTTCCTGGATGATACACAGAAAAAGACATCTTAAGGATTATGTCGCCAAATGTGAAATATGTAGCCAAGGATTCGTCACCAACCAAGAATTCAACAATCATATGGGATCTAAACATGGCATCAGTAATCACATTTGTAACATTTGTGGTAGGAGCTGTTACGATAAGGCTGCTTTACAAGGTCATATGGCACGTCATGCTGAAGATTATGAAAATAATCAAAGCATAAGATGTGAATTGTGTAACAAGTCTTTCCTCCAAGAAAAATATCTTAAGCACCATTTTATGAGAATGCACAAGGATGGCGGTCAGAGTTTCGTATGTGATCATTGCGGGAAAAAAGTAAATTCAAAGAGGAGCCTACGAGATCATTTGCTCATTCACAAGGGACTCAAACCAATTGAATGCAAAGAATGCGGAAGAAGTTTTGCTTTAAGAAcaactttaaaattacatatGCGTACGCACACGGGAGACCGACCTTACGAATGTCCAGAATGTGGAAAATGTTTCACGCAGAAATCGCCCCTTACAGTGCATATGAGATACCACACAGGCGAAAGACCTTATGTTTGTAGCGTTTGCGATAATGGATTTGTTAGCAAGGGGGCTTTATCATTAcaccaaaaaaataaacattctgCAATGtctaaaaagaataaaatatgcTCGGTAACATCAGAGAAAATTAAGCAAATAGTTGCACTTTCGAACAGGgaaaaaagtacaaaattaaAATGCTGTGATCAGTGTGGCAAACTCTTTAAAGATTCAAAAAGGCTTAAAAGACATCTTCTAACACATAAGGAAGATAGGCCATATTCATGTGCCATATGCAATAAGGCGTTTAAGATAAAGCACGCGATGCTAGTGCACATTCGAATTCATGATACTTCGGCGGCAAAGTCATTTGAGTGTGATTTTTGtacaaagaaattaaaatccAAGGGTGCTtggataatacataggaaaagGCACCTTAAAGAGTATGTGGCGAAATGCGAAATGTGTTGTCAAGGCTTTGTAACCAAGCAAGAATACAACAACCATATTGGATCTAAACATGGCAAAATCAACCACATATGCAACATTTGTAACAGGAGTTACTGTGATAAATTTAGTCTCCAATGTCACATGGTACTTCACACAGAAAATTACGGAAATAACCAAGACATAAAATGTGAATTATGCAACAAAACTTTTTTCCAAGAAAAGTACTTAAGccgtcatattaaaaaaatgcacaTTAACGGAGGGCAAACGTTTGTGTGTGACCATTGTGGGAAGAAAGTTAACTCAAAAAGAAGTTTACGAGATCATTTGCTCATTCACAAAGGTCTGAAACCAAATCAGTGTAAAGAATGTGGAAAAGGTTTTGcattaaaaacaactttaagaATACATATGCGTACACACACTGGCGATAGACCATATGAGTGTCCCCAGTGTGGAAAGTGTTTTGCACAGAAATCACCCCTTACAGTACACATGAGGTACCATACGGGTGAAAGACCTTACACTTGTGGTGTTTGTAACAGCGGGTTTGTTAGTAAAGGAACTTTGTCACTGCACCGAAAGAATAAACATGGATCAGTGTAA
Protein Sequence: MFKDAQRLKNHLESHKSDRPFSCDVCDKRFKKNYQLSAHMRVHNGSMSFECDFCSKKLRSKSSWMTHRKRHLKDYVAKCEICDQGFFTKQELSNHMGFKHGTSNYICNICGRSCYDRAALQGHMARHAEDYENNQSIRCELCNKSFLQERYLKHHFMRMHKDGGQSFVCDHCGKKVNSKRSLRDHLLIHEGLKPIECKECGKSFALRTTLNVHMRTHTGDKPHECPECGKCFTQRGPLKTHMLYHTGERPHTCEICSMGSNGEKPKIVILENLLGKFELSNVDKLGKLRSCNLCGKLFKDTRRLRKHLTSHSNERPYACDLCDKKFKRKHEVSAHMRVHDGSMSFECDFCSKKLRSKGSWMIHRKRHLKDYVAKCEICSQGFVTNQEFNNHMGSKHGISNHICNICGRSCYDKAALQGHMARHAEDYENNQSIRCELCNKSFLQEKYLKHHFMRMHKDGGQSFVCDHCGKKVNSKRSLRDHLLIHKGLKPIECKECGRSFALRTTLKLHMRTHTGDRPYECPECGKCFTQKSPLTVHMRYHTGERPYVCSVCDNGFVSKGALSLHQKNKHSAMSKKNKICSVTSEKIKQIVALSNREKSTKLKCCDQCGKLFKDSKRLKRHLLTHKEDRPYSCAICNKAFKIKHAMLVHIRIHDTSAAKSFECDFCTKKLKSKGAWIIHRKRHLKEYVAKCEMCCQGFVTKQEYNNHIGSKHGKINHICNICNRSYCDKFSLQCHMVLHTENYGNNQDIKCELCNKTFFQEKYLSRHIKKMHINGGQTFVCDHCGKKVNSKRSLRDHLLIHKGLKPNQCKECGKGFALKTTLRIHMRTHTGDRPYECPQCGKCFAQKSPLTVHMRYHTGERPYTCGVCNSGFVSKGTLSLHRKNKHGSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -