Basic Information

Insect: Rhagium mordax
Gene Symbol: SNAPC4
Assembly: GCA_963680705.1
Location: OY796656.1:891204-895038[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.7 1.3e+04 -1.8 0.0 3 17 192 206 191 208 0.87

2 6 0.5 1.7e+03 1.0 0.0 22 45 261 286 256 287 0.81

3 6 9.4e-08 0.00033 22.5 0.0 1 35 293 329 293 340 0.90

4 6 1.2e-10 4.3e-07 31.8 0.1 1 46 346 395 346 395 0.97

5 6 3.9e-10 1.4e-06 30.2 0.0 1 46 402 447 402 447 0.96

6 6 1.9e-10 6.6e-07 31.2 0.1 1 45 453 497 453 498 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.7	1.3e+04	-1.8	0.0	3	17	192	206	191	208	0.87
2	6	0.5	1.7e+03	1.0	0.0	22	45	261	286	256	287	0.81
3	6	9.4e-08	0.00033	22.5	0.0	1	35	293	329	293	340	0.90
4	6	1.2e-10	4.3e-07	31.8	0.1	1	46	346	395	346	395	0.97
5	6	3.9e-10	1.4e-06	30.2	0.0	1	46	402	447	402	447	0.96
6	6	1.9e-10	6.6e-07	31.2	0.1	1	45	453	497	453	498	0.95

Sequence Information

Coding Sequence: ATGGATGATGAAGAAGATGTAAAGAAAATGATAGAGTTCCTAAAGTGTAGTAAAGAAgaaaacaCGCTGGAATTTCAATATGAAGAGTTTATTAACTGTGAAGAAAGTGATGGAGATTTAGAAGAGattgaCACTAGCATAACTATAGAAAACTCTGTAGAAGATGAcgacgttatttttaaagatttttcaagtatggatatttcaaaattcaattcATACGATCCCAGAAATTCCCTGAAACCAGAAGAAAGGGCGGTAATAGATACCTGTGAGGATggagaattaaaaaatattctccTTTTAAATCGAACCAAGAACATGCAACTCATACAACTGTATAAGAAAATGAAGGATTTGTTAATAGAATGCCAGCAAAATATCGTTGAAAAAACTAAGGTTATAACGGCACACGTCACTGCTAGTAAGGATCAGACTAATTCTACCGGAGCCTGGCGTTTAGCTGCTCCTTACTTTAAAGACAAGCAACTTTTTGGTTGTCCTCCCAACTCCGATACCgtccaaaaaaataataataatgagctGTGTACATATGATCTTTCAAGTTTGCCGAAATGGTCGATCATTGAGtgtgaaaaattaataagagCAGTTAAGGTAAATTACAACATTAATCAGCAGAATAAGGTTATGAAAGCCATCCAAAAAGCAAGACAGGGCGAAAATCCAGAGTTGCTCAAAGAACTGGAAAGTAGGATAACGGAATTAAAAGAGAATGATAATTCCGAAATACCTCCCTTGAAGTCCAATGAAGACATTGATTGGATGAGAGTTGCAGATGTCTTTCTTAAAGGTAAGCACACAGCATTTGAATGTGAATCGTTCTGGCATATTTACCTGCACCCCTATATTAACAAATCGACGTGGACACCTAGTGAAAACGCAAAGCTAAAGGAGATAGCCAAGAAATATAAATTCCAAAACTGGGATCAAATAGCTGGTGACCTAGGAACTAGCAGAACAGGTTTTACGGTTTGTATGAATTATTTTGGCAATTTGCACGATAGGTTTAAGAAGGGAGAATTTACTCATCAAGAAGACTCTAGGCTGCTCGAATTGGTCCAGCGGTACAAAATGGGTAGCTATATTCCCTGGACTAAAATTGTCCAACATTTCAAGAGAAGAACCAGGTCCCAGCTGTATTACCGCTACACTTATTACCTCAGCCAAAACGATAAAAGAAGAGGCAAATTTACGGACGCCGAAGACGTATTATTGATGATAATCGTGGACAAATTCGGAAGAAACTATAAGAAATGCTGCGAGTATCTACCAACCAGATCGATGGTCCAATGTAAGGCTCGTTACAGCACAAACTTGCACAACCCTTTAAAGAAAGGTTCGTTCACTTTAGAAGAGGACAAGATCATTGTGAAATTCGTCGAGGAACACGGCGCCAAGTCTTGGACCAATCTGACGGACAAATTGCACCGAGCCAGGGGGCAAATCAGGCAACGGTATCTCACAATAAAGCAGTTTCTGGACGCCAACCCCGACGCAACGATCGCTGTCGTGCCCCGAAGGAGACATAAAGAATTGGAAGAGAATTCCTTTCCGTACTTAAGGTCCGTCGCGGATGAGTACCAGGACAATCCTGTGATTCCAACGTTAGACGAGATCGAAGAGGTCCTGAGAAACAAAAATAGTACGGTCGTGTCCAACGCCCATGAAGAAGCAGACAGTGACGATGAACTTATGACGAAACAAAACGTACGGTTTGCGAGTACGCCGGCTAATCACTACAACGTGGATGAAATGTTGacgaattttttttgcaactcTTTCAAAGTGGTTTCGTCGAAAGAAATTTCGCCACCGAACTTAAGGAGGGCCGTGAAAAGCCTTACGGTTGTGTTAGATGTCCTAAAAGCAGATCTGGATATACCCGAAAATTTTGATGAGGACTTGATGTTAGATAATCTAGACGTGGccatactaaatatttttacggAGGAAAAATTTAAGAGGCGTGAGCACAACAACTTGGGAAGTAGAGCCGGTATAACTAGTTTGATGCCGCCAAATCTGAATAGCATAATAGGGTTGAGGAGTCtcttaataaagttttcgcatTTTAGATCGGAAGAGAAGGAAGCGATGACAAAGTTCATAAACGGAGCCCATAGACAATTCTCCAGTAACATCAGGAGCGATGTGGTGAAGCAGTTCCTAAGTTTACCCGCCGACGCTAAGAAGCAAGTCGAGGCCGATcgtaaattattttacaaacgtTTTCACGCTCTGTTTAAATGGCCCGCTATAATGACGCTGGAAAATCCCTCGAATGAGTTACTTAGCACGGCTAAAGGATTAAGGTCTCGTCCACCGCCGCTTCGAGCTAGACGGACGTACAGTCGAAAAGGCAACGTTCCTGAACGGAACTTTCCTGAAGAGAACTTTCCTGAAGCGaaacgaataaaaatatccGAAATGCCTAGTACATCAGCACAAATGTTAAAGCTAACCCCAGTAACTAACAAAAGTGTGCTGGAGGATCTATTACGCGACCAAACTAAAAAGCTGTTCTGTTTTAACCACGTTAAATTGGGCGGCGAAACTAAGGCAATCATAAAAGAAATACCGTTGCCTAAACGTTTACCTGTGAGTAGTAATAGTGAAGAACTTACAAAGGATTCCTGTTCTAAGGTCGATTCTGAGGAGGCGAGTACCAGCAATGGAGAATCTTCTCGATTTGACCTGGGGCATGGCGAGTGCGTTATAATGCAGACGGACGAGGATAACGAGAGCGTTGCGACTGGAGCCGACGGCAGTATTATAGATGACGAGGAAGATCTCAAGAAGCTCAACAAGGTCCTTGGCGAAGAGTACGAGGAGGACACATATGATGATGATATGGAGGACCTTAATAAGTTGAACATATTTTTGAAGACTGAAGTAAATGGTGATAGCAGCGATGAATCGTTTGAATAG
Protein Sequence: MDDEEDVKKMIEFLKCSKEENTLEFQYEEFINCEESDGDLEEIDTSITIENSVEDDDVIFKDFSSMDISKFNSYDPRNSLKPEERAVIDTCEDGELKNILLLNRTKNMQLIQLYKKMKDLLIECQQNIVEKTKVITAHVTASKDQTNSTGAWRLAAPYFKDKQLFGCPPNSDTVQKNNNNELCTYDLSSLPKWSIIECEKLIRAVKVNYNINQQNKVMKAIQKARQGENPELLKELESRITELKENDNSEIPPLKSNEDIDWMRVADVFLKGKHTAFECESFWHIYLHPYINKSTWTPSENAKLKEIAKKYKFQNWDQIAGDLGTSRTGFTVCMNYFGNLHDRFKKGEFTHQEDSRLLELVQRYKMGSYIPWTKIVQHFKRRTRSQLYYRYTYYLSQNDKRRGKFTDAEDVLLMIIVDKFGRNYKKCCEYLPTRSMVQCKARYSTNLHNPLKKGSFTLEEDKIIVKFVEEHGAKSWTNLTDKLHRARGQIRQRYLTIKQFLDANPDATIAVVPRRRHKELEENSFPYLRSVADEYQDNPVIPTLDEIEEVLRNKNSTVVSNAHEEADSDDELMTKQNVRFASTPANHYNVDEMLTNFFCNSFKVVSSKEISPPNLRRAVKSLTVVLDVLKADLDIPENFDEDLMLDNLDVAILNIFTEEKFKRREHNNLGSRAGITSLMPPNLNSIIGLRSLLIKFSHFRSEEKEAMTKFINGAHRQFSSNIRSDVVKQFLSLPADAKKQVEADRKLFYKRFHALFKWPAIMTLENPSNELLSTAKGLRSRPPPLRARRTYSRKGNVPERNFPEENFPEAKRIKISEMPSTSAQMLKLTPVTNKSVLEDLLRDQTKKLFCFNHVKLGGETKAIIKEIPLPKRLPVSSNSEELTKDSCSKVDSEEASTSNGESSRFDLGHGECVIMQTDEDNESVATGADGSIIDDEEDLKKLNKVLGEEYEEDTYDDDMEDLNKLNIFLKTEVNGDSSDESFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -