Rmor049033.1
Basic Information
- Insect
- Rhagium mordax
- Gene Symbol
- Mblk-1_2
- Assembly
- GCA_963680705.1
- Location
- OY796663.1:17678476-17678964[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-09 2e-06 29.2 0.1 5 38 22 56 20 60 0.90
Sequence Information
- Coding Sequence
- ATGGTTAGAGTGTACAAGGAACCACTAGGCACCCGTCCATATTCAAATTATAATAAGAACTATATGTTAAGAGCCCTACAAGCGGTCAAAGCAAAACAGCTCAGTATAAGGCAAGCTTCGGAAAGGTATGCAGTGCCTAAAAGCACCGTatcttacaaaattaaaaattttcacgaATTAAAACCGGGGAGTCAACCGATGCTAAATACACAAGAAGAAAAATATCTTGTAGAAGGTATTATACAGTGTGCAGAATGGGGGTTTCCCCTGACTCAGGCAGATGTACGGTTAATTGTTAAAGGTTACTTAAATCATGCtggaaagaaaacaaaaatatttaaagataattATAAAGGGCCTGACTGGATGAAATTATTGTATAAGCGAAATTTGTCGGATGTAACTGTACGACTCTGTGAAAATATTAAGAGAAGCAGGGCAGCCGTAAAAAAAGTACCAaactttaaagaaaacactGCGTCGCTATAA
- Protein Sequence
- MVRVYKEPLGTRPYSNYNKNYMLRALQAVKAKQLSIRQASERYAVPKSTVSYKIKNFHELKPGSQPMLNTQEEKYLVEGIIQCAEWGFPLTQADVRLIVKGYLNHAGKKTKIFKDNYKGPDWMKLLYKRNLSDVTVRLCENIKRSRAAVKKVPNFKENTASL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -