Rluc029235.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- pnr
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010001473.1:64772-71977[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.62 3.7e+03 -1.7 0.3 8 23 80 95 67 97 0.64 2 2 9.2e-19 5.4e-15 55.4 3.7 1 35 273 306 273 307 0.98
Sequence Information
- Coding Sequence
- TACATCACTGTTTGTGGACCAGATGACAGAAATGAACTGGGTAACAAGTCATCAGAACCTGGAGGACGGGAAGAAATGGATCATGATCAAGGACTGGATATGTCAGTTGAACGGAAGTTGAAGGTGGAGGAAGACCTAGGGGAGGAGAAACAGAATGGGACAAGCCATGGAAGCCCTCGTGAGTCAGACAATGAAGAGAGTAACTGTGAATCAACAGCCTGCAGTGCAGATGATGAGACAACAGGGGGGTGGAGAGCAGATGTCCGTTTCAACTCAGATGAGTGTCATGATGTTGGAAACAGACCTGTTGGAGAAGCCAGCAATCTTCTAAGAACACTTATTTCCTGTCGGAAGTTAGGGATTACACCAACAGAAGCAGCAGCAAATAATCGTGTTGCTCCTATTGGTACTTCACTCCAACATTCATTAAAATCCCGTAGTAAACTGTATTCTGCTAATCAAGGCTCCCCAGTCATCCCGGAAACAACTGTAGAATCCCACTCAGCAGCCGTTCTAGGAAATCGAACTAATCTTCCTTCAGCTGAGGAGATGCCTTCAGCATTTACACTAGCAATGAAATCGATGGAAAAAGCTGCAAAGGCAAATATGACTGTGGTAGCAATGAGCAAACAGGACAATAACAGAAGGAAGCAAAGCTGTCCATCAAAAGCAGGTGCTTCAGCAATAAGAAGAAGCCCTGTTTCTCCGTATGTTCATGGAGAAACCTATCTGCCAGACTTCACTGGCAACAATCCTTGGTGTAACATCTCTGCTGTTAAGACAGGAAGGTTGGCAGCTCGCCGCATGGACCTAGCATGCAGTAACTGTGGTACCATGACCACCACAATCTGGCGACGCAACCCAGAGGGTGAGATGGTCTGCAATGCCTGTGGGCTATACTATAAACTTCATGGTGTTAACCGACCTGTTACAATGCGGCGTGACACCATACACACCAGACGCAGGCGGCCTAAAGGAGAAAAGGGCAGTGGACGACATAGGAACAAATCAGGTAATAGTGGAAGCAGCAATGAAGATCCAGTGGATATGTTGGCTGCGCTTCGGAGGCAGATTCAGCCTCATCTCATGCTGGCTCTGCAAGCAACTCCTGAAAGCAGTAAAAGCATCTCATTGTCCACATCAGGCAACCACAATCACTTGTCTCCAGTAGTCAGTGTACCTTCAGCATATGCCATGGTGCAGGTGAAGGCAGAACCTATGGAGTCTGCTGGAGAAGAAGAAGAAGAGGAAGAAGAAGATGAAGATGAGAATATGGCTGACTTGCCTCTGAATCTTGTTTCTACAACACTCTCAGAGCCATCATCTCAGTGA
- Protein Sequence
- YITVCGPDDRNELGNKSSEPGGREEMDHDQGLDMSVERKLKVEEDLGEEKQNGTSHGSPRESDNEESNCESTACSADDETTGGWRADVRFNSDECHDVGNRPVGEASNLLRTLISCRKLGITPTEAAANNRVAPIGTSLQHSLKSRSKLYSANQGSPVIPETTVESHSAAVLGNRTNLPSAEEMPSAFTLAMKSMEKAAKANMTVVAMSKQDNNRRKQSCPSKAGASAIRRSPVSPYVHGETYLPDFTGNNPWCNISAVKTGRLAARRMDLACSNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKGSGRHRNKSGNSGSSNEDPVDMLAALRRQIQPHLMLALQATPESSKSISLSTSGNHNHLSPVVSVPSAYAMVQVKAEPMESAGEEEEEEEEDEDENMADLPLNLVSTTLSEPSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -