Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.12 5.2e+02 1.5 0.0 15 25 16 26 14 26 0.88

2 17 0.067 2.8e+02 2.4 0.0 15 25 26 36 24 36 0.88

3 17 0.035 1.5e+02 3.3 0.1 15 25 36 46 34 56 0.72

4 17 0.04 1.7e+02 3.1 0.2 15 23 66 74 53 76 0.60

5 17 0.05 2.1e+02 2.8 0.0 15 25 76 86 74 86 0.89

6 17 0.19 8e+02 0.9 0.0 14 25 85 96 83 96 0.88

7 17 0.048 2e+02 2.8 0.0 15 25 96 106 93 106 0.89

8 17 0.097 4.1e+02 1.8 0.0 14 24 105 115 104 116 0.84

9 17 0.068 2.9e+02 2.3 0.0 14 24 115 125 113 126 0.87

10 17 0.18 7.5e+02 1.0 0.1 14 25 126 137 125 138 0.87

11 17 0.05 2.1e+02 2.8 0.0 15 25 137 147 135 147 0.89

12 17 0.055 2.3e+02 2.6 0.0 14 25 146 157 145 157 0.87

13 17 0.054 2.3e+02 2.7 0.0 15 25 157 167 155 167 0.90

14 17 0.00062 2.6 8.9 0.1 14 26 166 178 164 178 0.94

15 17 0.034 1.5e+02 3.3 0.1 17 25 189 197 182 207 0.59

16 17 0.097 4.1e+02 1.9 0.0 14 25 206 217 204 217 0.89

17 17 0.16 6.7e+02 1.2 0.1 14 24 226 236 225 239 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.12	5.2e+02	1.5	0.0	15	25	16	26	14	26	0.88
2	17	0.067	2.8e+02	2.4	0.0	15	25	26	36	24	36	0.88
3	17	0.035	1.5e+02	3.3	0.1	15	25	36	46	34	56	0.72
4	17	0.04	1.7e+02	3.1	0.2	15	23	66	74	53	76	0.60
5	17	0.05	2.1e+02	2.8	0.0	15	25	76	86	74	86	0.89
6	17	0.19	8e+02	0.9	0.0	14	25	85	96	83	96	0.88
7	17	0.048	2e+02	2.8	0.0	15	25	96	106	93	106	0.89
8	17	0.097	4.1e+02	1.8	0.0	14	24	105	115	104	116	0.84
9	17	0.068	2.9e+02	2.3	0.0	14	24	115	125	113	126	0.87
10	17	0.18	7.5e+02	1.0	0.1	14	25	126	137	125	138	0.87
11	17	0.05	2.1e+02	2.8	0.0	15	25	137	147	135	147	0.89
12	17	0.055	2.3e+02	2.6	0.0	14	25	146	157	145	157	0.87
13	17	0.054	2.3e+02	2.7	0.0	15	25	157	167	155	167	0.90
14	17	0.00062	2.6	8.9	0.1	14	26	166	178	164	178	0.94
15	17	0.034	1.5e+02	3.3	0.1	17	25	189	197	182	207	0.59
16	17	0.097	4.1e+02	1.9	0.0	14	25	206	217	204	217	0.89
17	17	0.16	6.7e+02	1.2	0.1	14	24	226	236	225	239	0.77

Coding Sequence: ATGGCTccccttggcctagtcactataGACACAGCAGTCTGCGCAGGACGTTTTGAAGTTCACAAGACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAGAAGGACGTTTTGAAATTCACAACACAGCAGAAGGACATTTTGAAGTTCACAACACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAGAAGGACGCTTTGAAATTCACAACACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAGAAGGACGTTTTGAAGTTCACAATACAACAACAGGACGTTTTGAAGTTCACAACACAGCAGCAGAAGGACATTTTGAAGTTCACAAAACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAGAAGGACGTTTTGAAGTTCACAATACAACAGCAGGACGTTTTGAAGTTCACAACACGGCAGAAGGACGTTTTGAAGTTCACAACACAGCAGAAGGATGTTTTGAAGTTCACAATACAACAGCAGGACGTTTTGAAGTTCACAACACAGCAGCAGGACGTTTTGAAGTTCACAACACAGCAAAAGGACGTTTTGAAATTCACAACACAGCAGCAGGACGTTCTGAAGTTCACGACACAGCAGAAGGACGTTTTGCAGTTCACACCATGCACAGTTCTCCCTGCATTATATACGAGCCCACATAG
Protein Sequence: MAPLGLVTIDTAVCAGRFEVHKTAAGRFEVHNTAAGRFEVHNTAEGRFEIHNTAEGHFEVHNTAAGRFEVHNTAAGRFEVHNTAEGRFEIHNTAAGRFEVHNTAEGRFEVHNTTTGRFEVHNTAAEGHFEVHKTAAGRFEVHNTAEGRFEVHNTTAGRFEVHNTAEGRFEVHNTAEGCFEVHNTTAGRFEVHNTAAGRFEVHNTAKGRFEIHNTAAGRSEVHDTAEGRFAVHTMHSSPCIIYEPT

Sequence clustering based on sequence similarity using MMseqs2