Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.063 2.7e+02 2.4 0.0 23 29 47 53 45 53 0.88

2 4 2.6e-19 1.1e-15 58.1 8.3 1 29 66 94 66 94 0.98

3 4 1.4e-17 5.9e-14 52.5 5.2 1 29 111 139 111 139 0.97

4 4 8e-19 3.4e-15 56.5 5.5 1 29 172 200 172 200 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.063	2.7e+02	2.4	0.0	23	29	47	53	45	53	0.88
2	4	2.6e-19	1.1e-15	58.1	8.3	1	29	66	94	66	94	0.98
3	4	1.4e-17	5.9e-14	52.5	5.2	1	29	111	139	111	139	0.97
4	4	8e-19	3.4e-15	56.5	5.5	1	29	172	200	172	200	0.97

Coding Sequence: ATGTCTGAGCAGTGGCTGCTAATCAGATTCACTGGGGTCAGGTCCTTGCCTTCTCTTGCAACAATCAAGTGCCAGTTTGTGTGTCCTCATACTTGCCTGGCTGTTGTGTGTTCGATGTGCTTGCCAGTGGATGTGGTTTTGTCTGGTTGCCCACGCGCAGATCGCACGCAGATACAAGCGCATTCACAGGAACTCAAGTGCCCGACACCCGGGTGTGACGGCTCGGGCCACGTCACCGGAAACTACTCTTCCCATCGCAGTTTGTCCGGCTGTCCGCGAGCCAACAAGCCCAAGAGCAAACCTCGAGACGGGCAGGATTCGGAGCCTCTGAGATGTCCCATTCCTGGATGTGATGGATCTGGACATGCAACAGGGAAATTCTTGTCTCACAGAAGTGCATCAGGATGTCCTATAGCTAATCGGAACAAGCTGCGAGTGCTGGAGAATGGAGGGACAGTTGAACAACACAAAGCAGCTGTAGCAGCAGCCACTGCCATGAAGTTTGAGGGAGTCAACTGTCCGACACCTGGCTGTGATGGCACGGGCCACATCAATGGTTCGTTCCTCACGCACCGCTCATTGTCAGGTTGTCCCATGGCTGGCAGTGGCCAGGGAGGAATTCCAAAGAAGAACAAATATACACCTGATGATATGAACAATATGTACGCCAAGGCTCCACCAGGAACAGGGGGTTGTGAAGAAAAGAGATGTCAAGACTGGGGCTTTGTGTTGTGA
Protein Sequence: MSEQWLLIRFTGVRSLPSLATIKCQFVCPHTCLAVVCSMCLPVDVVLSGCPRADRTQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKLRVLENGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGTGHINGSFLTHRSLSGCPMAGSGQGGIPKKNKYTPDDMNNMYAKAPPGTGGCEEKRCQDWGFVL

Sequence clustering based on sequence similarity using MMseqs2