Rluc021767.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Reticulitermes lucifugus
Gene Symbol
Zfp64
Assembly
GCA_026260175.1
Location
JAKCWW010008459.1:1170-16274[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1 1e+02 4.4 1.0 1 19 36 54 36 56 0.90
2 11 0.0089 0.89 10.8 2.8 3 23 338 360 336 360 0.90
3 11 0.00012 0.012 16.7 3.2 1 23 366 388 366 388 0.98
4 11 6e-05 0.006 17.7 2.2 1 23 394 416 394 416 0.97
5 11 1.8e-06 0.00018 22.5 1.0 1 23 422 444 422 444 0.99
6 11 6.2e-05 0.0062 17.6 0.3 1 23 450 474 450 474 0.97
7 11 0.001 0.1 13.8 1.7 1 23 480 503 480 503 0.96
8 11 6.5 6.5e+02 1.8 1.2 2 23 510 531 509 531 0.92
9 11 0.037 3.7 8.9 0.8 2 23 537 558 536 558 0.97
10 11 0.059 5.9 8.3 6.2 1 23 564 587 564 587 0.97
11 11 5e-05 0.005 17.9 0.4 1 23 630 652 630 652 0.99

Sequence Information

Coding Sequence
ATGAACATACCTATCAGTACGGCTGGATCACAAGTGTATGTGCAATTTCCTTCTGCTGTGTCACCACAGTTTCAAAACATATTGTCTACAAATCAAGAAGATGTGCATATATGTGGAACGTGCAAGCAGAATTTTTCAGACATTAACCTCTTTGTGGCACACAAGCATGCAGGGTGCATTCGAAATACTCAGAAACCTCCAGGTAGTGCACCCATGTTACTGGGACAATCTACCCTGGATTACTTAAGCACTGCACCTTCTCCAGGTGGTGAAGATTCAACTTCTCCTTCTCCACTAGGACCACCAGTATTTCAAGTCATTGTTGGTGGCTCAGATTTATCAGTGCATTCAGAACCTGGAAATTCAAGGCATACATTGTCATGCAGAGAAAATGGTGATTCCCAGATACTTCGATCTCGACTGCTTGGGATCCAGAATGACCAGCAAGTAACAATGCAGCAGCAAAACATTACCAGCAATTCAGGAGGAATGCAGGCTATTGTTATGCCGCAACAATCTAGACGGGAATTTCAGATTGATGAAGAAGCAGTTGCAACAATTCTTGCCAACCAGCTTGCCAATGAGGATGTCACATCAACCCATACAAATATGTCTCATGCAAGAACAGCACCCATACTTGTGTTAGGAAATATGGACAGTGAAATGATTATGCCACAGTCAAGGGAATCTTTAGACCTCCGATCCATAGATCTCCCTGGAGAAGCAGTAGCAATTGAATTGGAACCTGAACAGAAACATGTCTGTAGCAATAAAGCAAGTGAAAACACACAGGGAAGTTTGCCTGCTGGGAACACAGCAAGGAAAGTTGTGCCCTGGGAGTTAAAAGACAAACTCTGGGCTCAGGCAAGTGGAAAAGAAGTGACTGAAGACCATATGAAACTTGCTGCATCACCCATGTCTTGTTCCATATCCACAGGCACAGCGAACATCTCTTCACCTGCAGTAGGACTTTCTATCATGTCAAGATCACGTGCCAAGAAGCGACATGATTGTGCATTTGATGGTTGTGGCTTTTCTACATGCTACCTGAAAGATTTAGTTCGCCACATGAGGCGACATACAGGTGAGCGTCCATTCCACTGTGAAACATGTAAAAGGTCATTTAGCCGAGGTGACAAGTTGCAGATGCACTTACGCATACATTCAGGTGTAAAACCTCATCACTGTGACCAGTGTGATTATGCCACTGTAGACAGTGGCAGTTTGCGTAAACATATGCGCATCCATAATGATGAACGCCCATACAAGTGCCAGATATGTCCATACCGATCAAGGGATTCATCTCAACTTACAGTACACTTACGGACCCATACAGGTGATAATCCATTTGTGTGTCCATATGATTCATGTCCATCAGCATTTAAGACAAGTTCAGATCTCAAGAGGcatgccagaatgcatactggagagaaaccatttgcctgtgaattctgtgattacaagtgtgccataaaatCAAATCTTCGAGTCCACCTACGGCTTAATCACACTGAAGCGAAATCCATTCCATGCAATACATGTAGTCATGTATCTACATCAAAAAGAGCTTCAAAGGAGCATGAGAAGATCCATGCTGATGAGGTGCTAAAGTGTGGAGTCTGTGCCTACACCTGTATTAGCACTGCAAGTATGAAGAGCCACCTGAGAATACACACAAAAGACAAACCTTTTTCTTGCAAACATTGTCAATACACATGCAGGCAGCAGGGAATCCTTAAGGCTCACGTAAAGAAGAAACATCCTGATTTGAGAGTTCCTAGAAAAGGAAAAAGTGCTTCAAAAGAACCAATGGCAGGAAAAGTTGGGTCTTCCACTCGTAATGTGCCAAAGTCCATAGCTCACTCCAAGCCATTCTGCTACAAATCATACAAATGTACATCTTGTGATGCAGCATTCGTCCGAGAGGATTCTTGGAGAAGTCACATGAGGCAACACCAATCCCAAGAAACAGTTCTTTCAAGTATTGTTTCAGTTACTGCAAACAGTCTGGTTTCAGAGTTGGAAAGCTGTCAGCGACAGAAGGCAGTCAACATGTTAGAAACAGACAGTCTTCATGCCACTGCTGATCTCCTTCAACATGAATCATTTATGTTGTCACTAGATAATCAGAACTCAGGTTCTAAGGAAGTAAGAAAGTTAGACCAGCAGTTTCAAAAATCAAAAGACATATCAACAGCATGTCGAGAACCAGTTAACAGGTCCAAAGAATTGAAGGAAGGTTGTGAGAAGGAAGGGCAACTAGTATCTTCATATGAACGAGATGAAACTGAGCCAGTGTTAGTTTATGTTCCAAACTCATCAATGCGAGAAGGTAATGTTGATGACAGTTTACGCAATGCTGAAATATTAGCTTCATTCAATCAGGGCACTCCAATCCTGGTAACTGGTCGTTGTAGTCAGTACATTACTTTACCTACAGACCAGAGTATTGTGGAGCAACTGGCAGCAACCCTTCAACCTGGCACTACCTATCAGTATGTTCTATCCAGTACACTGGGGAATGAGGCAACATTTATACAAACTGCCTCTGACAGTGAGTCTGAACTTGCATGTCATGTTGATACTGCTGTCCACATGCCATCCATAATCTCTCTGCATATGGAAAAACAGTCAGCAGTTAAAGATAAGAAGTGA
Protein Sequence
MNIPISTAGSQVYVQFPSAVSPQFQNILSTNQEDVHICGTCKQNFSDINLFVAHKHAGCIRNTQKPPGSAPMLLGQSTLDYLSTAPSPGGEDSTSPSPLGPPVFQVIVGGSDLSVHSEPGNSRHTLSCRENGDSQILRSRLLGIQNDQQVTMQQQNITSNSGGMQAIVMPQQSRREFQIDEEAVATILANQLANEDVTSTHTNMSHARTAPILVLGNMDSEMIMPQSRESLDLRSIDLPGEAVAIELEPEQKHVCSNKASENTQGSLPAGNTARKVVPWELKDKLWAQASGKEVTEDHMKLAASPMSCSISTGTANISSPAVGLSIMSRSRAKKRHDCAFDGCGFSTCYLKDLVRHMRRHTGERPFHCETCKRSFSRGDKLQMHLRIHSGVKPHHCDQCDYATVDSGSLRKHMRIHNDERPYKCQICPYRSRDSSQLTVHLRTHTGDNPFVCPYDSCPSAFKTSSDLKRHARMHTGEKPFACEFCDYKCAIKSNLRVHLRLNHTEAKSIPCNTCSHVSTSKRASKEHEKIHADEVLKCGVCAYTCISTASMKSHLRIHTKDKPFSCKHCQYTCRQQGILKAHVKKKHPDLRVPRKGKSASKEPMAGKVGSSTRNVPKSIAHSKPFCYKSYKCTSCDAAFVREDSWRSHMRQHQSQETVLSSIVSVTANSLVSELESCQRQKAVNMLETDSLHATADLLQHESFMLSLDNQNSGSKEVRKLDQQFQKSKDISTACREPVNRSKELKEGCEKEGQLVSSYERDETEPVLVYVPNSSMREGNVDDSLRNAEILASFNQGTPILVTGRCSQYITLPTDQSIVEQLAATLQPGTTYQYVLSSTLGNEATFIQTASDSESELACHVDTAVHMPSIISLHMEKQSAVKDKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00370490;
90% Identity
iTF_00370490;
80% Identity
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