Basic Information

Gene Symbol
ZNF131
Assembly
GCA_026260175.1
Location
JAKCWW010002168.1:21917-37397[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.0012 0.12 13.6 0.7 2 23 285 306 284 306 0.97
2 9 1.2e-08 1.2e-06 29.3 0.1 1 23 312 334 312 334 0.99
3 9 0.033 3.3 9.0 0.5 1 23 340 362 340 362 0.97
4 9 2.5e-05 0.0025 18.9 0.2 2 23 369 391 368 391 0.96
5 9 0.00011 0.011 16.9 0.9 1 23 397 420 397 420 0.97
6 9 0.0045 0.45 11.8 0.3 1 23 427 449 427 449 0.97
7 9 1 1e+02 4.4 1.6 1 23 455 478 455 478 0.95
8 9 0.00068 0.067 14.4 7.4 1 23 483 505 483 505 0.96
9 9 0.0073 0.73 11.1 2.1 1 23 511 534 511 534 0.97

Sequence Information

Coding Sequence
ATGGATTTGGATGAAAACACTAACGTATTGGACGAAGTTGAAAATCTTTTCAAGAAGCTCGAAGCACTTCCAGAAAATCTTAAACGAGCCGCGTTTAGTAAAATTCAGGAAAAGTTACCACTTGAAGATCAACTTCTCAAAGATACTAGTATAAATGGAAGAAGGAAACGTCCAGGAAGAAAGCGTAAAATCCAAGTTTTTGGAAGGGAATGTGATGAAAATAAACAGGCAGAAACTCCATGGTTTTCAGAAAACATCGAAACAGAGTATGTTGTTGAAGCTGTATTTACCAGCAGAGGGCGCAGAGCAAAAAGAATTAGTTATGCACACATGCATGGATTTGGAAAAAATCATGAAGATCTTTATGAAAAATCAAAGAATCTCAGTGAAGAGAAGAAGAAAAAGAAAGAAATGCAGTACCGTGGTAGTAATGTTGACCTAGAATTGCCAGTAAGAGCAACAGTCCATTCGAGGGATGTTACTAACTCAGAAATTAAAGAACAAAATGTGAATTCTGATAACAGTATTTTATCCAATGCAGAAACTTCAGATAAAACAGCAGAAGAGGGAAATGAATTTTTAAATTCTGACAAAACAGTTTCAGCAGTTTGTAATAGCACAGAGTGCCTTGAAAATGAAAAATCAAAGCTGATTGATGACCAGTCTGCAGTTCCAGAGGACTTACAAACAGAAAATTCAAGCTGCTCAGAACAAGATGATAACGCAGTAATCCACAATTTAAATAGCTCTGAGGAAGCAATTAAAACAGAGAAAGGAATACAAGAATGCTCACGCACTACATCAGGTTCAGTCCTTTGGAAAAGGCACAAAGTCCCTCAGATTGACAACTTGACTTGCCAAGATTGTAACTTTATTACAAGTAGCAGGTCATTATTAGAAGTCCATTCACGTCGCCATACTGGAATCAAACCTTACGTGTGCCCAGACTGTGGCAAAGCTTTTCCACAGTCATCAGGCTTGAATGTTCACATGAAACGTCACCGAGGGCAGCGAGATTATCCTTGTGACTACTGTGAATATCGTGCCTATACCAAAGTGGACAAACTGCGACACATGACAGTTCACACAGGTGAACGCAATCAGGTTTGCCAGTATTGTGGCAAAGCATTTGCCAAGGACTCCACACTTCGAGAACATGTTCGCAGTATTCATGAAAGGCCTTTCAAGCATGTGTGCAGTGAGTGTGGCTTTGCAACATTTCGAGCCAATAACCTGAGAGTACACATACGCATGAGGCATCGTGGAGAGTACAACAACCATGTATGTCCAGTATGTAGTGCACGTGTTAAACAGAGGAATGCATTCCTTGAACACATGCGTGCACATACCGGGGAAAAACCTTTCAGGTGTGAACAGTGTGAGAGTTCATTTGCCTGCCTGGCAAGACTGACGGTACATCGTAAATCTGTTCATGAGCCAAGGAAATTTCCTTGCTCCCAGTGTCATAAGACTTTCCAAACAAAGCACCATTTGTTACGTCATACTGTAATACATACCAAAGCAAAGCCTTTTTCTTGCCCATTTTGCACATATTTATGTAATACTCAAGGCAACATGACCAAACATGTGAAGATAATCCATAACATGCCACATTTCTCATATAGAAAATATAAAGCAGATCAGGAATGTGAGGCATTTTCAAACAGTCAAGTGAACCCAGAGTGGGTTGAAAAGGGTCAAAGAGTCACTGAACAGTACCTGAAAGACCTGTCTACAAAACTTGGCCGAAATGTAACTCTAGATGAACTCCGGGCACGTGAAAATGAGAAGCAGAAGCGTATAAATGATGAAGCAGAACAAGCCAAAATCAAGCGCATGAATCGCGTTCATACACCAGAACATTCATATCATTCACGTCTTGGTAAAATGGCTTCATTAAATTCAAAGGCAGAACCTATGAAACTGGAAGGGGAGGAGATAGTTGATCCAACCACATTAATTCTTCAAGTAGCTGCCCAGAATACCGACAGTTTTGTAGATATAGTGAATAATGAAGATTTGTCATCAACACCACATATTGTCCAAGTGGATTTATTATCAGGTATATGTAATAGCTCTCCCACAAGTGAGACTTCGCAAGTAACTGTAGCTCCACACTTAGTGCAGATGTTATCAGGTATAGACAGTGATGAAAATCTAAAGAGTAATACACAGGTTATTCATATACAGACTTCAGATGCACTACAGGAAACTGAAGTGGAGGAAGGTGGTGAGTTTGAGACTGTTATCTTATCAAATGATGGAGAAGGAAGTGATTATGTAGCAAGACGAGTTTATGAACTTGTGTCAGGTCAGAATCTACGACTGTGTTTAAATGCAGAATTTATTGAAGCTGGCGATGGCAATGCAGTTCAAGTTTTTCAGCAGGAGTCATCAAAAGGAGATGAAGTTTACAATGTAGGTCAGAATTCTGAAACACCAGTGATTGAACTTGGATGTACTGATCATTTAATGTCAAACAAAGAAGGCAACATTGAAGAAGCAGATACTGTTGTTGTAATCATAAATACAGATCACTCTCAGGAAAACGCTGCTTAA
Protein Sequence
MDLDENTNVLDEVENLFKKLEALPENLKRAAFSKIQEKLPLEDQLLKDTSINGRRKRPGRKRKIQVFGRECDENKQAETPWFSENIETEYVVEAVFTSRGRRAKRISYAHMHGFGKNHEDLYEKSKNLSEEKKKKKEMQYRGSNVDLELPVRATVHSRDVTNSEIKEQNVNSDNSILSNAETSDKTAEEGNEFLNSDKTVSAVCNSTECLENEKSKLIDDQSAVPEDLQTENSSCSEQDDNAVIHNLNSSEEAIKTEKGIQECSRTTSGSVLWKRHKVPQIDNLTCQDCNFITSSRSLLEVHSRRHTGIKPYVCPDCGKAFPQSSGLNVHMKRHRGQRDYPCDYCEYRAYTKVDKLRHMTVHTGERNQVCQYCGKAFAKDSTLREHVRSIHERPFKHVCSECGFATFRANNLRVHIRMRHRGEYNNHVCPVCSARVKQRNAFLEHMRAHTGEKPFRCEQCESSFACLARLTVHRKSVHEPRKFPCSQCHKTFQTKHHLLRHTVIHTKAKPFSCPFCTYLCNTQGNMTKHVKIIHNMPHFSYRKYKADQECEAFSNSQVNPEWVEKGQRVTEQYLKDLSTKLGRNVTLDELRARENEKQKRINDEAEQAKIKRMNRVHTPEHSYHSRLGKMASLNSKAEPMKLEGEEIVDPTTLILQVAAQNTDSFVDIVNNEDLSSTPHIVQVDLLSGICNSSPTSETSQVTVAPHLVQMLSGIDSDENLKSNTQVIHIQTSDALQETEVEEGGEFETVILSNDGEGSDYVARRVYELVSGQNLRLCLNAEFIEAGDGNAVQVFQQESSKGDEVYNVGQNSETPVIELGCTDHLMSNKEGNIEEADTVVVIINTDHSQENAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00370485;
90% Identity
iTF_00370485;
80% Identity
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