Basic Information

Insect: Reticulitermes lucifugus
Gene Symbol: THAP1
Assembly: GCA_026260175.1
Location: JAKCWW010003782.1:15103-31493[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00024 0.023 15.8 2.7 1 23 479 501 479 501 0.97

2 9 8.8e-08 8.8e-06 26.6 3.0 1 23 507 529 507 529 0.98

3 9 0.032 3.2 9.1 0.2 1 23 535 557 535 557 0.98

4 9 5.5e-05 0.0055 17.8 0.4 1 23 579 601 579 601 0.98

5 9 2.8e-06 0.00027 21.9 4.1 1 23 607 629 607 629 0.98

6 9 0.00087 0.087 14.0 1.5 1 23 635 657 635 657 0.97

7 9 0.00011 0.011 16.9 3.5 1 23 663 685 663 685 0.97

8 9 4.6e-06 0.00046 21.2 1.7 1 23 691 713 691 713 0.98

9 9 0.00061 0.06 14.5 1.8 1 23 719 741 719 741 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00024	0.023	15.8	2.7	1	23	479	501	479	501	0.97
2	9	8.8e-08	8.8e-06	26.6	3.0	1	23	507	529	507	529	0.98
3	9	0.032	3.2	9.1	0.2	1	23	535	557	535	557	0.98
4	9	5.5e-05	0.0055	17.8	0.4	1	23	579	601	579	601	0.98
5	9	2.8e-06	0.00027	21.9	4.1	1	23	607	629	607	629	0.98
6	9	0.00087	0.087	14.0	1.5	1	23	635	657	635	657	0.97
7	9	0.00011	0.011	16.9	3.5	1	23	663	685	663	685	0.97
8	9	4.6e-06	0.00046	21.2	1.7	1	23	691	713	691	713	0.98
9	9	0.00061	0.06	14.5	1.8	1	23	719	741	719	741	0.97

Sequence Information

Coding Sequence: ATGTCTATGCGTCGAAGAATGGTGGCGTCATGTTCAGCAATTAATTGCTCAAATTCAAGGAACAATAGCAGGAGAAATGTAACATTTCACAGGTTTCCTTTAAGTAATCCAAAACTCTGTAAGCAGTGGGTTCATGCCATTTGTCATCCAGGTTTTAAGCCCTCAGCACATCATTTGCTGTGCTCTGATCATTTTGAAAAGAATTGTTTTCTACCAGGATATGTTAATCGACGGCAGTTAAAAAAAAATGCAGTACCTACCTTGTATCGTTGTACTGAAAAGAAATCACAGCAGCAGTCACCAAGCCCAGTAGAACAGGAACCAGGGGTATTATCCAACCATAGAAAAGATAATGTGCCATCAGACTGTGATGAAGAAGCTGCAGGTTTATTGGATGATCAGTTTGATTCTGGAAGCAAAGTGGAGGAACCAGTAAAAATGCGCACCGAGTTCTTTTGTCGTGTTTGTGCGTGTACAAGTGAGGAACTGGTCCCAGTGTTTGGGGAGCAAGGTTTGGAATTGCAGCTCCTCGAGAAGATTCACATACATCTTCCTATAATGGTCACCCCAGAAGATATGTTGCCGGTGGCCCTGTGTACGTCTTGTGTTTATAAACTTGAGATGTGCCATGAATTTGTTCATGGATGCTTGGATGCAGATATAAAGTTGAGAACAATCCTTGGCTTACAAGTGGATCACAAAATATACAGCGATGAGGACACAACAGATACTGAACCTTCCACAGAGAAGGAACGAGAACAAGAACACTATTCAAAGATGTATGAAGATTCTGCAGATCAGGCATTTGAAAATCATACACGAGTTATAATAAACTCAGAAGGGGCTAATGGTAAATTTGTTTGCAAAGAATATCCGAAAATTCCATCAGTATTAGCCAGACAGAATACTGAGGTACATGTGAAAGGTTTGGATAACATAAAGTATGAGGCTCCTGACTTTGATCATTACTCTGGTGATAAACTTGATTGTACAGAATATACAAACATCCAAACAGAACAGAATACTGAGGCGGATGCAGAAAATGTGAATGAGACAGAATGTGAGGCTGATACAGAAAATGTGAATGAGACAGAATGTGAGGCTGTTAACTTCAGTCAACAGTATGATCTGCAGAATGCTGAAGTGCAAGAAGACTCATATGATATGCAAATTCATGATCACATGAAACATTCAGAACCTTCAGCAGCCTCCATGGATCTGAGAAGTGGTAGAGCTGTAAAGAAGGTGACATTGAACACGAAGAAACCGAAATACAAAGTTGTCATTGTGAAAATGAAAGATGCAGTGAACATGACACACACTGCGAAATTCAAAAAGGCTTTAGATCTTGTGATGAATGCAAAGGAGGAGGAGTTAGCTTCCAACAAGAATGTGCTTGCTGGTCAAATGCAACTGCACACAGATGAACTTCCACATGAATGTACATACTGTGGAAAAAGATATCGTCTGAGAAGACAGCTTGCAAATCACAAATTAATTCATGCTAATGCTCGTCTGCATAAATGCCCTGTTTGTGGAAAAGGATTTAATCGTCAGCAGCACTTGAGAGCTCATGTTCGGACACATCAGAAGTCATTGAAGTACACTTGCAAAGTATGTAAGAGTCCGTTTCTGAGTGTGGGAGAGCTTATTGTGCATCGTAAAACTCATACTCAGGAAGAAATTGAGGAAGCGTCAAAGCAGCAAGTCCTGCAAGGTGGAGATCCTTTAGCATTTGTgtgtcagatatgcggaaaacagctggcaagcaagttcactctcaagaaccatgtgatgatgcatgcagatgataaaccatttgtttgcgagatctgtggaaagagtttcacaatgaggtcaactctacacacgcatcatcgtgtgcatactggagagagaccccattcatgtcaacattgtggtgaggcattcctgtctagacagaaccttattgtccatgaacgcatacatacaggggaaacgcctttcaaatgtGCACAGTGTGATAAGGCATATCGTTCTAGACACAGCCTGAGACAGCATCTGTTGTTTCATGCAGACTATCGGCCACACGAGTGTCAAGAATGTGGGAAGAGATTTAGACGTCAGGATATACTTGTCACGCACATACGCACACACACTGGGGAACGCCCCTTTGCTTGCGTTGTTTGTGGCCGTGCATTCAAACAAAGAGGGGACTGTAACAAACACCAGCAAAGACATGCGTTATAA
Protein Sequence: MSMRRRMVASCSAINCSNSRNNSRRNVTFHRFPLSNPKLCKQWVHAICHPGFKPSAHHLLCSDHFEKNCFLPGYVNRRQLKKNAVPTLYRCTEKKSQQQSPSPVEQEPGVLSNHRKDNVPSDCDEEAAGLLDDQFDSGSKVEEPVKMRTEFFCRVCACTSEELVPVFGEQGLELQLLEKIHIHLPIMVTPEDMLPVALCTSCVYKLEMCHEFVHGCLDADIKLRTILGLQVDHKIYSDEDTTDTEPSTEKEREQEHYSKMYEDSADQAFENHTRVIINSEGANGKFVCKEYPKIPSVLARQNTEVHVKGLDNIKYEAPDFDHYSGDKLDCTEYTNIQTEQNTEADAENVNETECEADTENVNETECEAVNFSQQYDLQNAEVQEDSYDMQIHDHMKHSEPSAASMDLRSGRAVKKVTLNTKKPKYKVVIVKMKDAVNMTHTAKFKKALDLVMNAKEEELASNKNVLAGQMQLHTDELPHECTYCGKRYRLRRQLANHKLIHANARLHKCPVCGKGFNRQQHLRAHVRTHQKSLKYTCKVCKSPFLSVGELIVHRKTHTQEEIEEASKQQVLQGGDPLAFVCQICGKQLASKFTLKNHVMMHADDKPFVCEICGKSFTMRSTLHTHHRVHTGERPHSCQHCGEAFLSRQNLIVHERIHTGETPFKCAQCDKAYRSRHSLRQHLLFHADYRPHECQECGKRFRRQDILVTHIRTHTGERPFACVVCGRAFKQRGDCNKHQQRHAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00370458;
90% Identity: iTF_01289026;
80% Identity: iTF_01289026;