Basic Information

Insect: Reticulitermes lucifugus
Gene Symbol: Znf219
Assembly: GCA_026260175.1
Location: JAKCWW010002052.1:38988-43839[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.6e-05 0.0056 17.8 4.8 2 23 700 721 699 722 0.95

2 12 0.00029 0.029 15.5 1.2 1 23 728 750 728 750 0.97

3 12 1.6e-05 0.0016 19.5 0.7 1 23 756 778 756 778 0.99

4 12 0.13 13 7.1 5.1 2 23 785 806 784 806 0.97

5 12 1.6e-06 0.00016 22.6 1.2 1 22 812 833 812 833 0.96

6 12 0.0059 0.59 11.4 0.8 1 23 840 863 840 863 0.94

7 12 0.00032 0.032 15.4 0.7 1 23 869 891 869 891 0.98

8 12 8.1e-05 0.0081 17.3 3.8 1 23 897 919 897 919 0.97

9 12 0.00043 0.043 15.0 0.5 1 23 925 947 925 947 0.98

10 12 0.0068 0.67 11.2 1.6 1 23 953 975 953 975 0.97

11 12 2.9e-05 0.0028 18.7 2.1 1 23 982 1002 982 1002 0.99

12 12 8.5e-06 0.00085 20.3 1.0 1 23 1008 1031 1008 1031 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.6e-05	0.0056	17.8	4.8	2	23	700	721	699	722	0.95
2	12	0.00029	0.029	15.5	1.2	1	23	728	750	728	750	0.97
3	12	1.6e-05	0.0016	19.5	0.7	1	23	756	778	756	778	0.99
4	12	0.13	13	7.1	5.1	2	23	785	806	784	806	0.97
5	12	1.6e-06	0.00016	22.6	1.2	1	22	812	833	812	833	0.96
6	12	0.0059	0.59	11.4	0.8	1	23	840	863	840	863	0.94
7	12	0.00032	0.032	15.4	0.7	1	23	869	891	869	891	0.98
8	12	8.1e-05	0.0081	17.3	3.8	1	23	897	919	897	919	0.97
9	12	0.00043	0.043	15.0	0.5	1	23	925	947	925	947	0.98
10	12	0.0068	0.67	11.2	1.6	1	23	953	975	953	975	0.97
11	12	2.9e-05	0.0028	18.7	2.1	1	23	982	1002	982	1002	0.99
12	12	8.5e-06	0.00085	20.3	1.0	1	23	1008	1031	1008	1031	0.97

Sequence Information

Coding Sequence: ATGCCATCAAGCGTTGGACAAACTTCAGTCTCTTTGTCTAATAACAATGCAAGTTCTGCAGGACACTTTTTCCATAGAGGGGTACAGCAGTCACCAGTATTCAATCCCTTGCTTTCTAATCAAGGGCTGTCATTGTATAATGGAGGTTTCGGTACACAGACCGGATACTCATCACAGAATTCTTTCTCCACAACAAACTTTAACAGTTATGGTCATGTAGAGCCTTCCCCTTGGATAGCAGAAACTCGAGTTACACCTGCAGTGAGCAGTACTTTGCAACAGATAGAAAGAGACAGGGGTAGTAGAGTTCAGTATTCTGAGAAGACCGTATCATGTAATGGTCAGAGCTTGTCCCATACGTGTTGTGGTAATAGAATAGGAATTGCTGAGAATATTGGCATCTGTTCCCCTATCTCTGCAGAAGCCTACAGAACAGTAAGTAAGGAATTATTAAGCATGCAGTCTAAGAGTAATAACAGCCTGGACTTTCAAGGCTGGTTCTGCAGCCAAGGCATGACGGGATATGGAAACCAGCAAAATCAAAACAATCAGCAAGCCAATTATAAATGCAGTGAACAGTTTTCATCATGTTCTGTTTCCCAGATAAACATGTTACTTCAGGAGCAGTCTGATCGTAAACATTCATCAGATTCTACTTTTGATCATTCACAACATGAAGGTTCAAACACAAATAAACAAACTAATCAGTGTTCTAATAGTGGTTCATTGAAGTCTGTCTGTGTGGAACAAAATAAAGAACAAAACATCAAATATTGTAATCTTCAGAAAGTTCAACAAAGTGGACAACCTGTGGAACATATTCAACCACCTGTGCAACTAAAAGAGCAGAATGGTTACATGGGTCCCTCACTGTATGGTCCTGCAGGTGAGCTGCAGGAGGATGCACTTTATTCTCAGGCATCTTTTATCTTACACATGGGTAGTGATGGTTCTCATAACACAGGACATTTTCAGAGCCACTTTGTTTCTTCAAAAAATCAGAACAATAGTGTAGATACTAGTAAGTCTTACGCTGTATCACCAGTTGTACAGCACTTCCAGGAGCATGGCCGGTGTGGCCTGGATGCAGGAATATCATGTGATGTGATGGATAGTTGCCTTCAGACAGACGTAAAAATTGTGAATGAGAATTCTGTGAATATATCATCCAGTAACACCTGTTGCCAACTGTCAGTGGAGCCAACCAGTAACCAGTTGGTTTTCGACGTGCAGAAGTCGGCTGTCAACTGCATGTCAGGCTGTAATGTTGCCATTACTGATGGAATTGAGTTGTGTGCAAATACCCAACAGTTGCAGATAGAGTGCAGTGAGGCTGAGAGTAAGGAGAACAGCAGCCAAGAGTCCACCAGCATCACTGGTGAGAGTGACATCATTGTAGAAGAGAGTGAAGAAGAGTTGACAGAGAGTGAGATTTCTATTGAAGAAATAAAGGGCACAGTGTTTAGGGAGCAGGAATCTGCCACATGCTTGGTATGCAGCCTCTCGGCAGATACCAGCAATCAGTTCATACACATGCAGGGTGACTTGCCTGTGACATCAGCATCCCACATTCCTGTGGTAACCAAACTAGCACAAGTGGTATTGGATAATCACACACAGATTCTTAAACTCCAAAATGAATTCATGTGCAGGCGATGCCTAAATTTGATTGACACTGTTGACTGTTTGGAGACAAAATTAGCTGCTGTAAAACAAGATTTAATACAACTATTTGAAACACGGCAAGTCTCCTTAAAAGATCTGGAAAACTGGAAAGTAAGTGATGATACTACCGACAAAATTTCAGAAGAATCAAAGAGCTGTAGGGATATACCCCGATCTACAGACCTACTAGAAAATACTTCAAAAAACTTATCTGTAGATGAATTAGATACTAATACTGACAAATCATGTGAAAATGAGGAAATAAAAGATAAGGATGATGAGAATAGAAGAAGTGAAAAATTTAATGAGAAAGTGGTAACAGAATGTGAGAAGACTGACATTGCTTTTGATAAACAAAATGCATATAATGAGGGGTCTGTATCAGCATGTGATGTTGCTCTTGAAGTGGAAGTGGCTTCTGAATTAAAGGTTCAGTGTGATGTCTGCAGTAAGTCTTTCTCAAGCAAAGAATATTTAAATAAGCATCACCAGCAGCATCACACCAAACAGTTTAGCTTCTATTGTGATCGCTGTGGTAAGGGGTTCACTGTTCGATGTGCACTGGAGAACCACCTGTTGCTCCATGCTGGAGAGTTTCGTTACCAATGTGAACTCTGTGGGAAGCTTTTCATTCAACGCTATTCGTTGGATGATCACTTGCGTAAGCATGAGGGTCGATTCCGTCTTACTTGCCAGCAGTGTGGAAAGGGTTTTATGTGTCGTAACTCCTTGCACATCCATACACGGACTCACACAGGAGAACGCCCTTTTGTGTGCCAGCATTGTGGTAAATGTTTCAGTGCCAGCTCAAACCTTGTGACTCATATTCGTGTGTGTTCTGGGGATCTGCCATTTCATTGCAAGCAGTGTAATAAGAGTTTTGCTCTTATGGCACAGCTAGGGGCTCATGTTTTGTCACAGCATGAGGGGCAGTACAGATTTAAATGTACAGTGTGTGGCAAAGGTTTCATAAAGGATTCTGATAGAAAAGTTCATGAAAGGTCACATTCAAGAGAAAAGCCCCATAAATGTGTTATCTGTGGTAAATGTTACAGTAGTATAGGGAATCTAAATCAGCATACAAAACAGCATAATGGAGAGCGGCCTTTCAAGTGTTTGGTATGTGGACAAGGTTTCTTGCGTAGAAGTACTCTTGCTAGTCACATGAATCAGCACACTGGTGCCCGTCCATTTAGTTGTGACCAGTGCAACAAAACATTTTTGGCTAAACGAAACCTGTATGCACATCGTAAATGGCATGCAGGTACCATTAAGCGCTACACTTGTACCATATGTGGAAAGTCATTTAATCACGGTCTGCAAGTCCACATGAGGACCCATTCAGGATATAAACCATACACATGTTCAGAATGTGATATGGCCTTTACTGTTAGAAGTACCTTAAACAAACATGTGAAAAGTAAGCACAAGAAAACTATGAGCACACAGTTTGAAAAACAGCCTTAA
Protein Sequence: MPSSVGQTSVSLSNNNASSAGHFFHRGVQQSPVFNPLLSNQGLSLYNGGFGTQTGYSSQNSFSTTNFNSYGHVEPSPWIAETRVTPAVSSTLQQIERDRGSRVQYSEKTVSCNGQSLSHTCCGNRIGIAENIGICSPISAEAYRTVSKELLSMQSKSNNSLDFQGWFCSQGMTGYGNQQNQNNQQANYKCSEQFSSCSVSQINMLLQEQSDRKHSSDSTFDHSQHEGSNTNKQTNQCSNSGSLKSVCVEQNKEQNIKYCNLQKVQQSGQPVEHIQPPVQLKEQNGYMGPSLYGPAGELQEDALYSQASFILHMGSDGSHNTGHFQSHFVSSKNQNNSVDTSKSYAVSPVVQHFQEHGRCGLDAGISCDVMDSCLQTDVKIVNENSVNISSSNTCCQLSVEPTSNQLVFDVQKSAVNCMSGCNVAITDGIELCANTQQLQIECSEAESKENSSQESTSITGESDIIVEESEEELTESEISIEEIKGTVFREQESATCLVCSLSADTSNQFIHMQGDLPVTSASHIPVVTKLAQVVLDNHTQILKLQNEFMCRRCLNLIDTVDCLETKLAAVKQDLIQLFETRQVSLKDLENWKVSDDTTDKISEESKSCRDIPRSTDLLENTSKNLSVDELDTNTDKSCENEEIKDKDDENRRSEKFNEKVVTECEKTDIAFDKQNAYNEGSVSACDVALEVEVASELKVQCDVCSKSFSSKEYLNKHHQQHHTKQFSFYCDRCGKGFTVRCALENHLLLHAGEFRYQCELCGKLFIQRYSLDDHLRKHEGRFRLTCQQCGKGFMCRNSLHIHTRTHTGERPFVCQHCGKCFSASSNLVTHIRVCSGDLPFHCKQCNKSFALMAQLGAHVLSQHEGQYRFKCTVCGKGFIKDSDRKVHERSHSREKPHKCVICGKCYSSIGNLNQHTKQHNGERPFKCLVCGQGFLRRSTLASHMNQHTGARPFSCDQCNKTFLAKRNLYAHRKWHAGTIKRYTCTICGKSFNHGLQVHMRTHSGYKPYTCSECDMAFTVRSTLNKHVKSKHKKTMSTQFEKQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00370425;
90% Identity: iTF_00370425;
80% Identity: -