Rluc021626.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010004810.1:9857-12547[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.059 73 4.3 0.0 20 46 241 274 234 274 0.72 2 5 3.4e-14 4.2e-11 43.5 0.3 1 45 280 326 280 327 0.94 3 5 4.6e-11 5.7e-08 33.4 0.2 1 43 333 379 333 382 0.95 4 5 2.3e-14 2.8e-11 44.0 0.0 1 46 388 433 388 433 0.99 5 5 6.6e-15 8.1e-12 45.8 0.2 2 44 440 483 439 485 0.95
Sequence Information
- Coding Sequence
- ATGGAAAATGCAGGTGAGGATGTTTATGATGCTGATATTGCTAATCTGAGAGAAGTGTTGGGTGCACGAACGATTTCTGAGGAGATCGAGGAGGGTGTAGAAGAATGTGAAAATAAGAGTATCAGTGACGAAGAAGTATTGGATAATGATGAAAGTTACGTTGCTTCGTCAGACCCGTATTTACATTTGAACGAAATTCTGTTAGATGAATGTGCTCCGTCGTGGAAAACATGTAGAACTGTTGGTTCTGCATGTTACGACGTGCTTCGTGCTGTAGAAAAGCAGCTTGTGACATTGCTTGGGAAGTGCGAAAAGAAGATTAAGGATCTGCAGGACCGCATTGATTCTGTCAAAAGTTCAAATGAGATGTCATTGAGTCGTGGTAGTTGGTGCTACATGTTTGGTATTCCATATTTTAAAGACCAGGATTACTTTCCTTGTCCCCCTAATGAGGATCATTTGAAGAAAGCTGCCAACAATGAATTGAGTATAGTAGATCTGCCAACAGTTAGACTGTGGAAAGAAAGAGATAAATCTAACCTACTGAATGCTGTAAAGGTAGAGGAAATAGCTAAACAAACTAAAGATGCAGAAGTCCGAAAGCAGTCAATAGTAAAGGCATTGTGTGGTATGGATGGTGCTACAAAGCCTGAAAATGTAGAACATGTGGAAGATTGTGACATTGCTCGTGTTGGGACTAAGAGTCTTGCAGAACTTGTTGGATTTAATAAGTCAGAATATGATTGGATGAAAATATCAGCAGTAGATTTAGCAGGGATTCATAGTCCTGATGAGTGTCGTGCAATGTGGCGTAATTATCTTCATCCTATGATAAGGAAAACAAAGTGGACTGTTGATGAAGATAATAAGTTGAAAGAACTTGTTGTTAAGTACAAAAATCAAAACTGGGATGCAATAGCGCAGGAGCTTGGCACTCATCGTTCTGCATATCAGTGCATGTTTCAGTATCAGACGAGACTTAACGATTCATTGAGGAAGAGCAAGTGGACAAAAGAAGAAGATAATTACCTTAAAGAAGTAGTGGAAAAGTGTCGGTTTGGTTCGTACATTCCATGGTCTAAAGTGGCTTCTTTTATGACTGGACGTAGTAAAAGTCAAGTATTTAATCGCTGGGCCTATTCATTAAACCCTTCAATCAAAAGAGGCCGCTTCACAAAAGAAGAGAATATCTTGATGGTAGCAGCTGTACGGAGGTATGGGACTGATTTCTCTCGTGTGGCCCGGTTCTTACCTGGTCGCACTTCAATACAGATACGTGAACGATACAAGACATATTTGAAATATCACAGTACTGGAGAACGGTGGACTCAACATGATGATGACTTATTGATGTCCTTAGTTGCAGAGCATGGAGAAGGCAATTGGAGTAAAATTTGCCAGCATTTTGTGAATCGAAACAGAACTCAGGTGAGGCATCGCTATAGTACTCTCCAGGGTTGGTTGAAAAAAGTCCCTGCAGATACAGGAAAGGTGCTGTCTGCACCTTCACGGCGGGTGAATGTTGAAACTAACAGAGAAGGAAAGATTTGGGAAAGGGTACAAGCCATTCTTCATAATAGGGCAGCAGGTGCAGAAATGAATGAAGACAACTTGAATAAGCTGAAAGACATACTGGAAATGAGGAAGCGTCCAGGACGTAAAGTGGGGCAAACAAAGCCATTAAGTACTGTTGGCAAACAGTATTATAGTTTTTTCAGGTGTGTATATTTTCAGCCTAGTGGCAGACAGAAGCGTCGTTATGATGAAGATGTAGTTCGGAATAGTGTACAAGTGATTGACAATATGCTTAAGTATTTTCAGGCACGCCTTAATATCCCTAAGGATGATTCTGCAATAGGTGTGGATCATTTGCTTCAAGAAGTTGACAGATCTTTTCTTCGTTATCTGGGAGACAGGGAAGAAGACAAATCCAGTCCTAATCTTTGTGACATATTACCAACAGATGATAGTACTCCAACTGCAATTCCAAATGGCCTCACAGCACTTACAGAAACTGCACTTTCGTCCCAGGTTTTGGGTGTGTTTACTGCACATCCTGAAGCAGAACTTGCTGACAGTCCAGATCAAGTTGCCAACATTTCCACCTTGCTTTCGGAAACATCTTCATTTGACCTGGTGGACAACACTTATAAAATACCTTACCTGTGTCCTCCCAACCACACCACTTTGGTTGGATTCCGCACTTTCCTTTTAAGCCGTCGGAATATTGCAGATAATGCAGGTGCACAGTCTAAACATTTTGTTACAGAAGATTCTGGTGGCAGTTCAGTGTCAGCTTCAGAGAAAATCACCCCTGAAGGTGCAGCAGCTTTGTGGAAGGAACGGTTGGCTTCTTTGTTTGTGTGGCCTGCAATAATGTCTAATATAGTTCCAAAATTGATGGATTCTTTGTTTCAAAATGATGGCCATCCAGCTACATGTACTAGCCATGGTGGAAGTAATGGTAATACAGGTGTTAAAAGGTCGAAAACCCATATACGAACGAAGAAAAGGAAAAGGACTGGAAAAGGGAAGGATGTTGCAAAAAAGAAAAGGAAGTACATAAAAAGTGGAAGGTACAAGAAACCATACGAAAATGCTGAATGTGTTGTGCGGAGGAAGAGTACTCGGCTTGTATCAGATCCTACAAGTGGATCGCTAAATGTGGAAATGGATGACATGGAGGTGTAG
- Protein Sequence
- MENAGEDVYDADIANLREVLGARTISEEIEEGVEECENKSISDEEVLDNDESYVASSDPYLHLNEILLDECAPSWKTCRTVGSACYDVLRAVEKQLVTLLGKCEKKIKDLQDRIDSVKSSNEMSLSRGSWCYMFGIPYFKDQDYFPCPPNEDHLKKAANNELSIVDLPTVRLWKERDKSNLLNAVKVEEIAKQTKDAEVRKQSIVKALCGMDGATKPENVEHVEDCDIARVGTKSLAELVGFNKSEYDWMKISAVDLAGIHSPDECRAMWRNYLHPMIRKTKWTVDEDNKLKELVVKYKNQNWDAIAQELGTHRSAYQCMFQYQTRLNDSLRKSKWTKEEDNYLKEVVEKCRFGSYIPWSKVASFMTGRSKSQVFNRWAYSLNPSIKRGRFTKEENILMVAAVRRYGTDFSRVARFLPGRTSIQIRERYKTYLKYHSTGERWTQHDDDLLMSLVAEHGEGNWSKICQHFVNRNRTQVRHRYSTLQGWLKKVPADTGKVLSAPSRRVNVETNREGKIWERVQAILHNRAAGAEMNEDNLNKLKDILEMRKRPGRKVGQTKPLSTVGKQYYSFFRCVYFQPSGRQKRRYDEDVVRNSVQVIDNMLKYFQARLNIPKDDSAIGVDHLLQEVDRSFLRYLGDREEDKSSPNLCDILPTDDSTPTAIPNGLTALTETALSSQVLGVFTAHPEAELADSPDQVANISTLLSETSSFDLVDNTYKIPYLCPPNHTTLVGFRTFLLSRRNIADNAGAQSKHFVTEDSGGSSVSASEKITPEGAAALWKERLASLFVWPAIMSNIVPKLMDSLFQNDGHPATCTSHGGSNGNTGVKRSKTHIRTKKRKRTGKGKDVAKKKRKYIKSGRYKKPYENAECVVRRKSTRLVSDPTSGSLNVEMDDMEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370157;
- 90% Identity
- -
- 80% Identity
- -