Rluc000436.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- lolal
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010005982.1:24286-31319[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-09 2.5e-06 27.8 0.1 1 41 266 307 266 309 0.89
Sequence Information
- Coding Sequence
- ATGACAGATCTGTGGCTCAAGTGGAACAGTCAGCTGGAGCTTTTGGGTTCCTTGGATAATTTGCTTGAGACTGAGAGTTTTGTGGATGTCACTATTGCTGTAGAGGGACAACTTCTTAAAGCACATCGTGTTGTCCTGTGTGCTAGTAGTCGATATTTCAACTCCATTCTGCGACCCAATACAACACCACACCCTATAATATTCATGAGAGATGTAAAATTTGTGGAAATGAAAGCAATTTTAGACTTCATTTATAAAGGAGAAGCATATGTAACACAAGAAAATATTCAGGGAGTTCTCAAAACTGCAGAAGCTCTTAAAGTAACAGGATTGTCCAGCATTTCATGGACAGAATCTTCAGTGAACTGTGTGCAGGTGGATGAGGCTTCTCAGTGTGACATATCAAACTGCCAAGCTGAATCAAAACCCACTGGTAGCTTGACTGTGCAGAAGGAAGCACAGGACATGTTGCCAGTATTGAATGACAGTTCATTTTCAAGTTCTTCAGGATGTCAGAAGTACAGCTCAGAAGAAGGAATTGGTGATGAAACAGAGAAACAGACTAATGCTGATGCAGATGGGCAGCAAGATACGGGCAAGTTGACTGAGGTAACCATAGGTTCTGTACTGTTTAAGTCAAAATATAACAGTGAAGAAGCAACAAAAGTGGCACATGTTTCAGCACTGGAAGATGGAGAGACACTGATGATACTGGAAGCACCACCTAATATATCGATTGCTTCTGTTCCTGTTTCCCCTTCCCGTACAAGAACAAAGCCAGCAGGAAGACGGTACACTAAAGAGGATCTTCAGTATGCCTTGGAACTGATACATCAGGGCCAGTTGGGAATCAAGCCAGCAGCTAGAGCATTTAACATACCCGCTGCAACTCTGCATCATGCAGCACGTCGGAGAAAGATCTCAAGTCCAATGCAGCAAGGAGGAAATCATATTGTATCATGTCACAGTAAAGTAACACCTAGCATCAGTGGGCATCAGATGTGA
- Protein Sequence
- MTDLWLKWNSQLELLGSLDNLLETESFVDVTIAVEGQLLKAHRVVLCASSRYFNSILRPNTTPHPIIFMRDVKFVEMKAILDFIYKGEAYVTQENIQGVLKTAEALKVTGLSSISWTESSVNCVQVDEASQCDISNCQAESKPTGSLTVQKEAQDMLPVLNDSSFSSSSGCQKYSSEEGIGDETEKQTNADADGQQDTGKLTEVTIGSVLFKSKYNSEEATKVAHVSALEDGETLMILEAPPNISIASVPVSPSRTRTKPAGRRYTKEDLQYALELIHQGQLGIKPAARAFNIPAATLHHAARRRKISSPMQQGGNHIVSCHSKVTPSISGHQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370325;
- 90% Identity
- iTF_00370325;
- 80% Identity
- iTF_01289086;