Rluc002178.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- kn_3
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010000106.1:75031-80135[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-34 2.5e-30 106.0 15.9 333 480 26 162 21 181 0.74 2 2 0.17 2.5e+03 -2.9 16.1 449 528 157 233 147 243 0.70
Sequence Information
- Coding Sequence
- ATGGACCTTAAGGAAATAAGATGGGAGAGCGTGGACTGGGTTGATGTGGCTCAGTATAGGAACAAGATTGACTCTCTTTTTGCAGCGCTGAACGAACCGACAATAGACTACGGGTTTCAGCGGCTCCAGAAACTCATACCACGGCATCCGGGGGACCCAGAGAAACTTCCAAAGGAAATAATCCTGAAGCGAGCGGCAGACCTGGCGGAAGCTCTCTATAGCATGCCACGAAATAATCAGCTGGCACTTTCAGCCCCACGCTCCCCTACAATGGGCAACAACGGGATGTCTTCGGGATTCAACACGTATACAGGGCAGCTCGCAGTGAGCGTCCAGGAGAATGGAAACGGTCAGTGGAATGAAGAGGAGTACGGCCGAGCACAGAGTAGTAGCGTCTCTCCGAGAGGGGGTGGCTACGGCTCCAGCGCCTCGACACCTCATTCCTCCAACGGTGGTGGTTCATACGTGACGGGGGCGTCCTCTGGCGTAACAATGAATGGTAGCTACAGTACTACTACACCCGGTACAGGTAGCGGAAGCGGATCTGCAGCGGGTGCGACAGGGTCACAACTCACAAATATGGGTGTTCCCGGTTCCCCCGCTGCATCGGGACTATTCAGTTCCTCGTCAAGGGTTGGAAGTTTAGTGTCATCCCCCTTCGCAACAATGAACCCTTTCGCCCTGCCAACGTGTAATTCCCAAACGTACGGAACGAGTCCTTTGCTTACGTCTGGCAAGTAA
- Protein Sequence
- MDLKEIRWESVDWVDVAQYRNKIDSLFAALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLALSAPRSPTMGNNGMSSGFNTYTGQLAVSVQENGNGQWNEEEYGRAQSSSVSPRGGGYGSSASTPHSSNGGGSYVTGASSGVTMNGSYSTTTPGTGSGSGSAAGATGSQLTNMGVPGSPAASGLFSSSSRVGSLVSSPFATMNPFALPTCNSQTYGTSPLLTSGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288755;
- 90% Identity
- iTF_01288755;
- 80% Identity
- iTF_01288755;