Rluc026309.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- jarid2b
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010001233.1:1-17287[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-24 4.8e-20 72.4 0.0 6 89 289 370 285 370 0.94
Sequence Information
- Coding Sequence
- CCTGTGCTCACTACACAGCACCAAAGACCTGCTGGTGTGTTGATGACAGAGCAGAAGAATCTTTATGGGTCTGTAGTTGGGGCATCTTCAACCGTCGCCACTGGAACGTATCCACCAGTTGGCACTGTTCAACCAACTGCTCGTGGGCGGCCACTTGTTCCTCCAAGCAATCACAAAAAGAGTGATGATACAATAGATACCAAGCCAGACAATACAGATGCTCTGAAGCCATCTGCAACCAACAGTAAAACTGTTGATATTTCTTCTGGTTTACATGCACAGTCTGAAGTGGACAGTACAGTGGACAAACCACTGGCCATGGTCTCTGCAGAGCTTATAGATAAGGCTGAGCAGAATACAGTACCATCCTTCAGAGAACAGAAAAGTTCTGTAAATCAAAATGCATTAATCTCTTCCTCACCTAGTGATGTGGTGGCACCTAAATTGCCTACAAGCAAAGGGTCAGGAAATGTAGGCAAAGAACAAAGAAGTTCAACAGAGGTCAACTCCCCAAGCACTTCATCAGCTTCAAAATCCACAGCAGGAAGCAGTAAGAGGAGCTCTCAGAAATCAAAATCAACGAGCTATGCATGTAAACCAAGCAACAGCACCAGTTTCCCAAGTCTGGACAGACCAGCTCAGATGGTTGAAGCACCTGTCTTTCATCCAACAGAAAAGGAGTTCCAGGACCCACTGGAGTACATTGACAGGATCCGACCTGTGGCTGAAAAGTTTGGGTTGTGTCGTGTCGTGCCACCTTCTAATTTCAAGCCTGAATGTAAAGTCAGTGATGACATGCGTTTCCTGGCATACAACCAGTATGTTCATAAAATGTTGCATCGTTGGGGACCAAATGTTAAGGAAATGATGGCTATCAAGAAATATTTAGCTACACAGAATATATCATTTAACCATCCTCCTTGGATTGGAGGCATGGAGGTTGACTTGCCACGTTTGTACAAAATAGTTCAGAGTTTTGGCGGTCTGAAGGAGGTAATTGAGAAGAAAAAGTGGCATCGAGTTGCAGATGGAATGAAGATCCCAAAATCTGCACAAGATAGAGTCACAAAATTAGATGATATATACTGCAAGTATTTGTTGCCATATGACACACTTTCACCAGATGAACGACAGAATCTGTTGGATGAAGTGGAGAAAGAATGGATGGAGCAAGAGAAGCGAGCAACATCACTGAGCAGTCCAGGTGGCAGTGATCTGCCTGAAGAAGAATGTGATAGTGACTCATCAGATGAAAGTGAAGAATGCATTGTGAAGGGACGGAACATGCCCTTGAATGCTTTCTACCGTATCGCTCGGAACACAATGAGCATGTGGTTCCGTCAGGCTGAACCACCAGCATCTGAAGTGGAGCAGGAATTTTGGCGCCATGTGACTCTACGACAGAGTCATGTTTGTGTTCACTCCGGTTCTATCGACTCCAGTGGCTGGGGGTATGGTTTCCCATGTTCTAAAAACAGCCCATTTGCGCGTCATCCTTGGAATCTAAAGGTGCTGACCAACAATAGTGGTTCAATCCTGCGATCCATTGGACCCATAATGGGGGTTACTGTTCCCACACTCCATGTTGGAATGCTGTTCACCACATGTTGTTGGTATAGAGATCCACATGGTCTGCCATGGGTTGAATACCTACATACCGGAGCAAATAAAATTTGGTATGGAATTCCTGACGAGTACAGTTCAGTATTCAGATCAGCTTTAACAAAACTAGTACCCAGGTATTGCAGGAACAAGACAATATGGCTTCCTTCTGACACAGCAATGGTTCCTCCACCCATGTTGGTGAAGCATGGTGTTTCATTGTGTCATACAGTACAGGAGCCAGGCCAGTTTATTTTAGTGTTTCCACGTGCTTTTACATCCAGTATTTGCACAGGTTACCTTGTCTCTGAGAGTGTCTACTTTGCACAGCCTAGCTGGCTTAATACAGCGGAGCAAGTGTTCAGGGATATTCAGAACAGCTGTGAACCTTCCATGTTCTCTTTGGAGAGGCTACTGTTTAGTATTTCAACAGATGGCAGAACAAATGTTGAAGTTCTGAAACAGGTTTTGCCAATGGTCCTTCAAATCAGGCAGGAGGAATTGGACTGTCGTAAACAGCTTTATGCACTGGGACTTAAGACATCAGAACGTTTGCCATTACCTGAGGTGAACATTAAACGCCGTAAGGCTCGTCAAGCTCGTGAAGAGGAGGGGGATTATGAGTGTGAGATTTGTAGAGCCAACCTCTTTGTGTCATTGGTAACTAACTCCCATGAAGAAGGGGTTTACTGTCTTCCTCATGCAATAGAACTTCTGACAAAAAAGAGGCATCATCTCAAATACTGCAAGCTTATGTACACATATGATCAGGCTGAACTGAATGAGCTGATTCAGAAGCTGCAAGAGAGGATTGAAGCAAAGAGTCAAAGGAAGTCGCAGGGGAAGCACAGCACTACTTCACAGAAACCATGA
- Protein Sequence
- PVLTTQHQRPAGVLMTEQKNLYGSVVGASSTVATGTYPPVGTVQPTARGRPLVPPSNHKKSDDTIDTKPDNTDALKPSATNSKTVDISSGLHAQSEVDSTVDKPLAMVSAELIDKAEQNTVPSFREQKSSVNQNALISSSPSDVVAPKLPTSKGSGNVGKEQRSSTEVNSPSTSSASKSTAGSSKRSSQKSKSTSYACKPSNSTSFPSLDRPAQMVEAPVFHPTEKEFQDPLEYIDRIRPVAEKFGLCRVVPPSNFKPECKVSDDMRFLAYNQYVHKMLHRWGPNVKEMMAIKKYLATQNISFNHPPWIGGMEVDLPRLYKIVQSFGGLKEVIEKKKWHRVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPDERQNLLDEVEKEWMEQEKRATSLSSPGGSDLPEEECDSDSSDESEECIVKGRNMPLNAFYRIARNTMSMWFRQAEPPASEVEQEFWRHVTLRQSHVCVHSGSIDSSGWGYGFPCSKNSPFARHPWNLKVLTNNSGSILRSIGPIMGVTVPTLHVGMLFTTCCWYRDPHGLPWVEYLHTGANKIWYGIPDEYSSVFRSALTKLVPRYCRNKTIWLPSDTAMVPPPMLVKHGVSLCHTVQEPGQFILVFPRAFTSSICTGYLVSESVYFAQPSWLNTAEQVFRDIQNSCEPSMFSLERLLFSISTDGRTNVEVLKQVLPMVLQIRQEELDCRKQLYALGLKTSERLPLPEVNIKRRKARQAREEEGDYECEICRANLFVSLVTNSHEEGVYCLPHAIELLTKKRHHLKYCKLMYTYDQAELNELIQKLQERIEAKSQRKSQGKHSTTSQKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -