Basic Information

Insect: Resseliella maxima
Gene Symbol: -
Assembly: GCA_029041755.1
Location: JAQOWM010000106.1:43018-45120[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.6 1.6e+02 3.6 3.1 1 21 244 264 244 267 0.88

2 9 0.00062 0.059 14.4 0.9 1 23 297 319 297 319 0.97

3 9 0.021 2 9.6 3.1 1 23 323 348 323 348 0.97

4 9 0.051 4.8 8.4 0.4 3 21 356 374 354 375 0.93

5 9 8.4e-06 0.00079 20.3 0.2 1 21 382 402 382 403 0.96

6 9 2.7e-06 0.00025 21.9 0.6 1 23 409 431 409 431 0.98

7 9 5.2e-06 0.00049 21.0 0.9 1 23 437 459 437 459 0.98

8 9 3.2e-05 0.0031 18.4 3.9 1 23 465 487 465 487 0.99

9 9 2.6e-05 0.0025 18.7 3.0 1 23 493 516 493 516 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.6	1.6e+02	3.6	3.1	1	21	244	264	244	267	0.88
2	9	0.00062	0.059	14.4	0.9	1	23	297	319	297	319	0.97
3	9	0.021	2	9.6	3.1	1	23	323	348	323	348	0.97
4	9	0.051	4.8	8.4	0.4	3	21	356	374	354	375	0.93
5	9	8.4e-06	0.00079	20.3	0.2	1	21	382	402	382	403	0.96
6	9	2.7e-06	0.00025	21.9	0.6	1	23	409	431	409	431	0.98
7	9	5.2e-06	0.00049	21.0	0.9	1	23	437	459	437	459	0.98
8	9	3.2e-05	0.0031	18.4	3.9	1	23	465	487	465	487	0.99
9	9	2.6e-05	0.0025	18.7	3.0	1	23	493	516	493	516	0.96

Sequence Information

Coding Sequence: ATGGAAGTGATTGATGGTGAGAACGCGTGTCGATTATGTTTGTCACAATCGCCAGATTTACACaatattttcaccaaaatgaGCATAGATGGTCTCATTACATCGCTGCCCGATATGTTGGCCTATACAGTTGATATATTtGTTAACGAACCCAATGAACTGTTACTGAGTAAAATTTGTGCGGACTGTCAACAgcaaataattacattttatgtttttaaacaaaaagtaaaaacaactgaacaatcTTTGCGTTGCATTCTCGTGCCGGAAGTGGACCATTCAAATGATGTCGTCCAACATTCAATTATAGAGGTAGATTCCGAGATAGAGAATGATGATACTGTAGTCATTAGACAAGCTCAACAACAGGTGTTAGATAAATTGGAACATTTATTGCAAGAACATATCGAAACCGATTGCGATCAAGAAATTGATGAGATGAATGTATCTAAAGTTGTTGTCCATCAAACCAAATCCGatgtaaatgttgaaaatatttcaaccgTTATAGCTTTGATCAACGAGAATAACAACTATATTGAAAGTAGTAACAATGTAGAAAATCCGGTggtcaatttgaaaaatcaagaaCAATCCAGAGTTCAGTCATCATTGAATTGTGAAACTATCGTtataaatgacataaaatcaattccattgaaagtaaaacaacaatcacaaatgaataaaaattcattggatttGATTATAAAATATCTACCATCTTATTCGTGTGGTATTTGCTGCTTATTATTTGCGTCCAAAGAGAATTTGAAAGATCACAATACACACTCGCATCCTAATTCAGATCAAATCGATAAATCGTACACTGATCATGAGTTCTTGAGTAAGGACAAGTTAATTGAATCGAATAATGACGAATTGTACTCATGTGGAGAGTGCGGTACACAGTGTTCAACCATTGatgatttaaaatatcatattACATTGCATTTAGACACATTTCAATGTCCAGTTAAAAATTGTGGTCACCAATATAAACATTTGGCACGACTGAGTATTCATCTTCGtaacaaacatatttatacAAATCATTTACTTTGTATGCATTGTGATAATGCATTCGATACATACGATGACcttcaattacattttaaacaGTCTTGcgctgaaaaaaaatttgaatgttttgaatgcggCAAAACATTTTACTCGAAAAAAGCATTGGTCGCTCATATAAAATGGAGCAAACCGAAAGgattcaaatgtgaaatttgtggAAAATTATTCACACAAAAAGCGTATCTTGATATTCACATTCGATTTCACACaaATGAACGGCCATTCAAGTGCACGGTTTGCGGTAAATCATACAAGACTAGCAGcATGAGAGCAGCACATCAGGATACACAtatcaaagaaaatatgtttcaGTGTAACATTTGCAATAAGAAGCTTAAAACTCGCACAACGTATCGAATTCACATGAAACGACACAAAGAAGGGAAAAATCATGAATGCGATATTTGCGGAAAACgtttttttaccaaattttCACTAAAGTTACATCTCACTAAAATCCACAAGGATAtcaacgataaaaaaaacgatgaagaagattttcaatttctaaatgatgatgaatttgcCGATTTAATTAACGACGATGATATTAtgaattgttttataaaattttcaacataa
Protein Sequence: MEVIDGENACRLCLSQSPDLHNIFTKMSIDGLITSLPDMLAYTVDIFVNEPNELLLSKICADCQQQIITFYVFKQKVKTTEQSLRCILVPEVDHSNDVVQHSIIEVDSEIENDDTVVIRQAQQQVLDKLEHLLQEHIETDCDQEIDEMNVSKVVVHQTKSDVNVENISTVIALINENNNYIESSNNVENPVVNLKNQEQSRVQSSLNCETIVINDIKSIPLKVKQQSQMNKNSLDLIIKYLPSYSCGICCLLFASKENLKDHNTHSHPNSDQIDKSYTDHEFLSKDKLIESNNDELYSCGECGTQCSTIDDLKYHITLHLDTFQCPVKNCGHQYKHLARLSIHLRNKHIYTNHLLCMHCDNAFDTYDDLQLHFKQSCAEKKFECFECGKTFYSKKALVAHIKWSKPKGFKCEICGKLFTQKAYLDIHIRFHTNERPFKCTVCGKSYKTSSMRAAHQDTHIKENMFQCNICNKKLKTRTTYRIHMKRHKEGKNHECDICGKRFFTKFSLKLHLTKIHKDINDKKNDEEDFQFLNDDEFADLINDDDIMNCFIKFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -