Basic Information

Insect: Resseliella maxima
Gene Symbol: -
Assembly: GCA_029041755.1
Location: JAQOWM010000948.1:2301982-2305849[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.44 42 5.4 0.4 2 21 346 365 345 366 0.94

2 15 3.7 3.5e+02 2.5 5.2 1 23 375 397 375 397 0.90

3 15 2.4e-05 0.0022 18.9 1.8 1 23 433 456 433 456 0.97

4 15 8.6e-05 0.0082 17.1 0.5 2 23 462 484 461 484 0.95

5 15 1.8e-06 0.00017 22.4 1.9 2 23 495 516 494 516 0.97

6 15 0.39 37 5.6 2.9 3 20 566 583 564 586 0.91

7 15 0.22 21 6.4 5.5 1 23 593 615 593 615 0.99

8 15 2.3e-05 0.0022 18.9 0.9 1 23 628 653 628 653 0.97

9 15 0.00028 0.027 15.5 2.7 1 23 660 683 660 683 0.98

10 15 0.00093 0.088 13.9 2.6 2 23 689 711 688 711 0.97

11 15 0.0092 0.87 10.7 0.1 2 23 749 771 748 771 0.95

12 15 8.5e-05 0.008 17.1 1.1 1 23 777 799 777 799 0.98

13 15 3.7e-05 0.0035 18.3 1.3 1 23 805 827 805 827 0.99

14 15 0.00029 0.027 15.5 3.3 1 23 833 855 833 855 0.97

15 15 0.0037 0.35 12.0 3.4 1 23 861 886 861 886 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.44	42	5.4	0.4	2	21	346	365	345	366	0.94
2	15	3.7	3.5e+02	2.5	5.2	1	23	375	397	375	397	0.90
3	15	2.4e-05	0.0022	18.9	1.8	1	23	433	456	433	456	0.97
4	15	8.6e-05	0.0082	17.1	0.5	2	23	462	484	461	484	0.95
5	15	1.8e-06	0.00017	22.4	1.9	2	23	495	516	494	516	0.97
6	15	0.39	37	5.6	2.9	3	20	566	583	564	586	0.91
7	15	0.22	21	6.4	5.5	1	23	593	615	593	615	0.99
8	15	2.3e-05	0.0022	18.9	0.9	1	23	628	653	628	653	0.97
9	15	0.00028	0.027	15.5	2.7	1	23	660	683	660	683	0.98
10	15	0.00093	0.088	13.9	2.6	2	23	689	711	688	711	0.97
11	15	0.0092	0.87	10.7	0.1	2	23	749	771	748	771	0.95
12	15	8.5e-05	0.008	17.1	1.1	1	23	777	799	777	799	0.98
13	15	3.7e-05	0.0035	18.3	1.3	1	23	805	827	805	827	0.99
14	15	0.00029	0.027	15.5	3.3	1	23	833	855	833	855	0.97
15	15	0.0037	0.35	12.0	3.4	1	23	861	886	861	886	0.96

Sequence Information

Coding Sequence: atgaaaaaatcgaaagaaaatcgTTGTCAATGCTGCAATAAACGGCTATCCGGAgaagaatttcatttggttttcgATGACGaaggaaaaaatcaaaatattgccGAATTATTGCATGAAAACATTGGcaaaatattatatgaatCGGATGATATAAGATATGCAATTTGTAATTCATGTTGGCAACAGTTGATACAATACaatgattttaaacaaaaatgcattgaagcCCATGAACGATCAagtgatgatgaaaatgccaatgataataatgataatgataatgatgaaattgtcAACACATTTcctgaatcatttttttcatccgaacgtttaaatgattcatttcaaaatgaaaccgAATTTGAGTATAAAAATAATAGTGAGTATCAGGATGAATCGCAAGATGACAACGATTATGTTatgaatgttgaatatttggatgaaaatgatttatttgaaaatgaaattgattgtcGACCAAATACtgatattttgattaataaaattccattgaattttacatCAGTTTTTGTGAAACCAGCTCCAATATCCGAAATTGACAATCCCGATCATTTGGCaataataaagcaaaaaatatcatttggaATACCTCGGCATGCTATTCGAACGAAAATTAATGGTGAAAGTCaaaattttgatgttgataaaATTGCCACCTCGAATGATCTCATTAATATTTTGGAAGATGATTATCTAATCAAGAACACTTATCCAAAAAAGGGTCCGGACGATACTGATGATGCGAAACCAATTGATATCAatgattatttaaaacaaattgcatCAATTACTTATATGGAAACTTATGACAATTACATAAACTGTATGcTTTGCTGCGAAGAGATAATCAGTCAACAGCATTTAATCTATCACATATATGAAAGTCATTCACTTGCAGATGGTGTTTTATGTGTGTTTGATATCAATTGTCCGTCATTTGATGATTTGATGAAAGTGCAACAGCATATTTTTTCTGAACATATTGATTTAATACCaaCGAAACTAGGTCTTGTTTGCCAAACATGCGAGAGTCCGTTTGAATCATCGGTACAATTTGGGAAGCATATGTGTTTAACTATCGAAGATGAACGTACAGATTTTCAGTGTGTCCATTGTGATAAAAAgctaaattcaaaaaaacgGTATTTGTTTCatatgcaatttcatttggaaaatgcaCGCCCAAAAGTCTGCATCATCTGTGAgctatcatttgaaaatgaggaaatattttataatcatGTGATGTTTTCACATGAACGTGTTTACGAGTATTTTTGTACGGAATGCGATAAaagtttttcatcaaattttcgTCTCGATTTACATATACGAACAACACATACCGagcgaaaattaaaatgtaatttatgtgataaatcatttgttgataaaaatatgCTCGATGAGCATATATCAAGTAAGCATTCGGTTCGAGCTCAAACGGAAAAAGCGCTTGAATGTCCAGAATgtaaaaaaacatacaatcgATCATCACGATTACGAAAACACATGACAACCCATGagcaaatggaaaagaatAGTGTTTATGTATGCGATCCATGTTCGATGGCATTCAGTGGACTACAAGAAATTGATGAACATGTTAATCGACTgcatgatgatgataatgttaatattataaaaaagGACATTTACTATGTAGTTTGTTGTGAGTACTGCGAATTAGCATTTATTGATAGTCAAAAATTGGCAACGCATAAACAATgtcattcaaatgaagaaaaaccatttaaatgtgaattttgtatgGCATGCTATGAAACGTATAGTAAATTAAAGAcacataaaaatacacatatcAATCAACAGCATAAATTTCCAGTACAACGACATTACATGTGTGATGTTGAAGAATGTTGGAAAACCTATCGCCACTGGAGTGATCTTTTAAATCATCGCAAAACTGTACATTTAATAAATCCatccattttcaaatgtaacgattgtgaacaaacattttatcaaagTTGGAATTATAGTTATCACAAAAAAACGGTTCATTCGATCACAACAATTAAATGTCAACTGTGTAATTACGAATGTAAAACCATTTACAATTTAAGAGCAcatcagaaaaaaatacattcaaataatgCGGGTCACGAATCACCATcgacaaaaccaaaaattaatacagctcgaacaaaaaaatcgactGAAATTGATCAATACATATGGAAATCGGACACGGCAATGATGTGCAATATTTGTGGAAAAGAGTTGGCAACACGAAATAGTGCACGGTCACACAtcgaaatgattcattttaaaatgaaaaatttttcctGCGACGATTGTGgtaaagaattttatttaaagaaaGATTTTATCGATCACAGGCGATTGCACACAGCTGAAATGCCATATGAATGTACAATTTGcatcaaaaaatttcgaaCCGCTTCAATGCTAAACGACCACAGAAAGACTCATTCAAACGATCGACCTCATAGTTGTCCTTACTGTAAGTCTACATTTAAACGTGCCtatgtattgaaaaatcacataaaacaACATATTGGAGTTAAAGGATTTCCATGTAAATTTATGAATTGCAAAAAAGAATATCGAACTCAATGGGAATTGAATAGTCATCATCGATTAAAGCATTCAAAAACGCAATGGAAGAATGTTCAATTGGAATCGAATGCTACAAataacgaatatttaattgaagaaaaagaacaattggAGACCACATTTGATCAATCCACCAGCAAtGACATTGCgacaaatgaaacatttcttGATAATCAACTAATTTCTGTATCTGGAGGACAAACACATGAAGATGATCATAATTATTTGGCACCAGAAAATGAAGTAAACACAGATGTCATTTATGTTGTTGATCAAagaatttcatcaattgaatcaacaaatatttgcaaCGCAAAACCAAcaaccatttttgtttgtaatccAAACTTTAGCAATGTAGCTATTATGGATGTTGGTGCTATTCAAACAGTTGACcaagaaatttaa
Protein Sequence: MKKSKENRCQCCNKRLSGEEFHLVFDDEGKNQNIAELLHENIGKILYESDDIRYAICNSCWQQLIQYNDFKQKCIEAHERSSDDENANDNNDNDNDEIVNTFPESFFSSERLNDSFQNETEFEYKNNSEYQDESQDDNDYVMNVEYLDENDLFENEIDCRPNTDILINKIPLNFTSVFVKPAPISEIDNPDHLAIIKQKISFGIPRHAIRTKINGESQNFDVDKIATSNDLINILEDDYLIKNTYPKKGPDDTDDAKPIDINDYLKQIASITYMETYDNYINCMLCCEEIISQQHLIYHIYESHSLADGVLCVFDINCPSFDDLMKVQQHIFSEHIDLIPTKLGLVCQTCESPFESSVQFGKHMCLTIEDERTDFQCVHCDKKLNSKKRYLFHMQFHLENARPKVCIICELSFENEEIFYNHVMFSHERVYEYFCTECDKSFSSNFRLDLHIRTTHTERKLKCNLCDKSFVDKNMLDEHISSKHSVRAQTEKALECPECKKTYNRSSRLRKHMTTHEQMEKNSVYVCDPCSMAFSGLQEIDEHVNRLHDDDNVNIIKKDIYYVVCCEYCELAFIDSQKLATHKQCHSNEEKPFKCEFCMACYETYSKLKTHKNTHINQQHKFPVQRHYMCDVEECWKTYRHWSDLLNHRKTVHLINPSIFKCNDCEQTFYQSWNYSYHKKTVHSITTIKCQLCNYECKTIYNLRAHQKKIHSNNAGHESPSTKPKINTARTKKSTEIDQYIWKSDTAMMCNICGKELATRNSARSHIEMIHFKMKNFSCDDCGKEFYLKKDFIDHRRLHTAEMPYECTICIKKFRTASMLNDHRKTHSNDRPHSCPYCKSTFKRAYVLKNHIKQHIGVKGFPCKFMNCKKEYRTQWELNSHHRLKHSKTQWKNVQLESNATNNEYLIEEKEQLETTFDQSTSNDIATNETFLDNQLISVSGGQTHEDDHNYLAPENEVNTDVIYVVDQRISSIESTNICNAKPTTIFVCNPNFSNVAIMDVGAIQTVDQEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -