Basic Information

Insect: Resseliella maxima
Gene Symbol: -
Assembly: GCA_029041755.1
Location: JAQOWM010000856.1:2065091-2067362[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.001 0.095 13.8 2.4 1 23 247 269 247 269 0.99

2 10 3.3e-05 0.0031 18.4 0.6 1 23 274 296 274 296 0.99

3 10 4.5e-05 0.0043 18.0 3.4 1 23 302 325 302 325 0.97

4 10 1.3e-05 0.0013 19.7 4.9 1 23 331 353 331 353 0.96

5 10 2.5e-05 0.0024 18.8 3.8 1 23 359 381 359 381 0.98

6 10 0.0024 0.22 12.6 3.9 2 23 408 429 407 429 0.96

7 10 3.7e-05 0.0034 18.3 3.3 1 23 435 457 435 457 0.98

8 10 0.00023 0.022 15.8 2.0 1 23 463 485 463 485 0.98

9 10 6.3e-07 5.9e-05 23.8 2.1 1 23 491 513 491 513 0.98

10 10 4.1e-06 0.00039 21.3 0.3 1 23 519 541 519 541 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.001	0.095	13.8	2.4	1	23	247	269	247	269	0.99
2	10	3.3e-05	0.0031	18.4	0.6	1	23	274	296	274	296	0.99
3	10	4.5e-05	0.0043	18.0	3.4	1	23	302	325	302	325	0.97
4	10	1.3e-05	0.0013	19.7	4.9	1	23	331	353	331	353	0.96
5	10	2.5e-05	0.0024	18.8	3.8	1	23	359	381	359	381	0.98
6	10	0.0024	0.22	12.6	3.9	2	23	408	429	407	429	0.96
7	10	3.7e-05	0.0034	18.3	3.3	1	23	435	457	435	457	0.98
8	10	0.00023	0.022	15.8	2.0	1	23	463	485	463	485	0.98
9	10	6.3e-07	5.9e-05	23.8	2.1	1	23	491	513	491	513	0.98
10	10	4.1e-06	0.00039	21.3	0.3	1	23	519	541	519	541	0.98

Sequence Information

Coding Sequence: ATGAATGCAACACAATCATCAAAAATTTGCCGAATTTGTTGTAATCAACGATCAAACAATCTTGTTTTTCTGCTGGAGACAGAGAATAAAgcaattgttaaaaaattaCGAGCATGTGCCGACATAACTATTGAACATGATGATCTACTGCCGAAAtacatttgcataaaatgtttacaaCAATTGACTTTGgcatacaattttaaaattcaatgtgaatttatGGATCAAAAACTTCGACAAACAATAGCTGGTTCGttgcaaaaacaaatcacaataCCATTGGGCCTTAAATCACAAGACTCGTCAAGCTATGGAAgtgatgatgatattgaaaGTAGTTCTATCTACAGTTCCGGTCAAGTTACAATGGATGACATTGATACAATCATTGAAGAAGAAAGCATTGAACAAGAGCACTTGATGACaaatttcgattatttaaaacaaaatactgaacaaaattcaatcaatcaagTTGGCTGTGTTAATTCAAATGTGTTTGgaatacaaatgaatcaattggaAGCGTTGAAAAATGATGTTGATCCAAATGCAATGGAAATTAGCCAAAAAACatcggaaaatgaaaaatttgatagTCTTGGTTCATTGCCCAGTGCAAAGGATATTGTCGAATGTGTTGATCAAGAAATGTTCAGTGTGAAATCAGATGATGCATCGTCGCCAATAGAACAAAcgacaaaaattaaatcgcCCAAAAACAAATTACCAAAATACAAATGTGATACATGCGATgcaacattttatattcactCTGATTAtatcaaacacacaaaaatacatgGCAAGAATCGTTATCAATGTTCGATTTGTAACAAATGGTTTGCCAAGCGATATCTTTTGAATGCACATCAAATAACGCATGCCGGTACAAAAAATCATGAATGCACATTGTGTCAAAAGCGATACACGAGCAAAACCAATTTGGATCGACATGTTCGTGTATTCCATAAACAGGAACGATCTCACAATTGCACCATATgtcataaatcattttcacaattgTCAACACTGCGACTGCATCAATCGGTTCATGTGGCCGAACGGGAATTCTCCTGTGATATTTgtgacaaaaaatttaaaaccgATGTTCATTTGAGAATTCACAAGAAACGACATTTACCGACCGAACAACGACGACCGATGCGAAAGTATTCACCGCCGAAAAAAACCTACAAACCGCCACAGAAATCATGCATTTGCAATGAGTGTGGAAAACGGTTTACAAGTGTTGCACTTCATCGTAGTCATATGCaAACTCATTCGCTTGAGAAAAAGTACGAATGCAACTTTTGCAAGAAACGATTCTCATTTCAACAAACTCTACGAAATCACATTTATGTACACACTGGTGAAAAACGATTCAAATGTGATATGTGCAATGTCTCATTCCGGCAATTTGGTCATCTCCAAGgtcataaattgattcattctGGCATTAAACCACACAAATGTACGATTTGTTCAAAAGCCTTTACACTTCGTGGTAATTTAACGGTTCATATGCGTTCGCATAGCGGTGTAACTTTGTATAAATGCAACATTTGCCCGAAGAAATTCATCGATGACAATGGATTGAAACGGCATCTATTGATCCATAatcgaaatgaagaaataaatacCGTTATCGAGCAGATTGTTGAGGCACCAATCATTGAAATACCATATGAAGAGACGCCCATTGTCGAGCAAAACGTTTTCGATaatgcaacaaaattcaatgtcaatCCACAAGCAATACAGCTAATTCCACCAATCGAAATGATTGGCGACAACTCACCAGTTATTTTTAACATACAGTAG
Protein Sequence: MNATQSSKICRICCNQRSNNLVFLLETENKAIVKKLRACADITIEHDDLLPKYICIKCLQQLTLAYNFKIQCEFMDQKLRQTIAGSLQKQITIPLGLKSQDSSSYGSDDDIESSSIYSSGQVTMDDIDTIIEEESIEQEHLMTNFDYLKQNTEQNSINQVGCVNSNVFGIQMNQLEALKNDVDPNAMEISQKTSENEKFDSLGSLPSAKDIVECVDQEMFSVKSDDASSPIEQTTKIKSPKNKLPKYKCDTCDATFYIHSDYIKHTKIHGKNRYQCSICNKWFAKRYLLNAHQITHAGTKNHECTLCQKRYTSKTNLDRHVRVFHKQERSHNCTICHKSFSQLSTLRLHQSVHVAEREFSCDICDKKFKTDVHLRIHKKRHLPTEQRRPMRKYSPPKKTYKPPQKSCICNECGKRFTSVALHRSHMQTHSLEKKYECNFCKKRFSFQQTLRNHIYVHTGEKRFKCDMCNVSFRQFGHLQGHKLIHSGIKPHKCTICSKAFTLRGNLTVHMRSHSGVTLYKCNICPKKFIDDNGLKRHLLIHNRNEEINTVIEQIVEAPIIEIPYEETPIVEQNVFDNATKFNVNPQAIQLIPPIEMIGDNSPVIFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -