Rmax002704.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Resseliella maxima
Gene Symbol
zfh1
Assembly
GCA_029041755.1
Location
JAQOWM010000106.1:381935-384334[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0004 0.038 15.0 3.0 1 23 173 195 173 195 0.98
2 16 2.1 2e+02 3.3 0.5 2 23 202 224 201 224 0.86
3 16 0.64 61 4.9 2.9 1 23 275 297 275 297 0.98
4 16 0.77 73 4.7 0.3 3 23 305 326 304 326 0.96
5 16 0.00049 0.047 14.7 0.8 2 23 374 396 373 396 0.96
6 16 8.5e-05 0.008 17.1 2.2 1 23 449 471 449 471 0.98
7 16 0.00051 0.048 14.7 0.6 1 23 476 500 476 500 0.96
8 16 0.098 9.3 7.5 1.7 1 23 530 552 530 552 0.98
9 16 0.00013 0.012 16.5 0.7 1 23 557 579 557 579 0.96
10 16 0.00014 0.013 16.5 1.7 1 23 587 610 587 610 0.98
11 16 1.5e-05 0.0014 19.5 2.0 3 23 628 648 626 648 0.97
12 16 8.3e-07 7.9e-05 23.5 0.9 2 23 656 677 655 677 0.96
13 16 0.7 66 4.8 0.3 2 23 683 703 682 703 0.95
14 16 1.4e-06 0.00013 22.7 0.8 1 23 709 731 709 731 0.98
15 16 2e-05 0.0019 19.1 2.6 1 23 737 759 737 759 0.99
16 16 0.014 1.3 10.2 6.3 1 23 765 787 765 787 0.96

Sequence Information

Coding Sequence
atggaatgtgTTTTTGTGGGTGAAAGTTTAATAGATATCAATCAATTGACAAATGATGGAAATCATTTCGAAAAGTTAAAAATAGgcgaaatatttcaattgaaagacAGCACCTTATCAATGTGTTGTATACATTGTTTACAAGAATTTCAATACTTTACTGAATTTTCGTTGCATATACAAGAACATTATTTACGCGGTGAAATTGCtcaattgaaagaaatcaAAGAAGAGATTTCAACTGAAGCTAAGAATCAAGATGAATTTTTGCAAGAAAATCTGGATATAATCATTGAACCTGAAGTAAAATGTGAAGTAATTGAAAACGAATTATTCAACGATGAATCGATGTTAGATCATTGGtctgatgatgatggtgatggtgatggtgatggtgatcgTGATGATGATTctttaattgaacaaaaatcagATTCAACTGAAAATACAACTGAAATTCCATCGGAGACACAGTCAGTTGTCGAAGGAACCGATTacgaaaagataaaaaataaatttaaatgtttgacATGTGACCATGAAACGACAAAGTggaacaatttgaaaaaacatttacaaatccACTCCAATTCAAAGAAGGTTGTGTGCCCAATTTGCTCACGTCTCTTCAACGCGGTACAATATGCAAGAAAACATGTGCATCGCACCCACAATATAAACATTACAACCGAAGAAATTCGACGAGCCCAACCGACAAGTAAAACAGTTACTAATATTGATCGTGTACAAgtgcaaacaaaatcaaaaactgaaagaaaaacatatacTGAAGGTGTGGAATATCGTAATATTGGTGATCGTTTTGAGTGTTTAACATGCAATcggaaaatgataaaatttgatCACATGAAAGAGCACCTGTTGACAcatacgaatgaaaaaaatgtactttGCCCCTTTTGTGCTCGTTCCTTCCTCAGTGAAGCATATGTAAGAAAACATGTTAATCGTACGCACAAGATGAAAATAACCGGAGAAGAGATTAAAGCGGCTCAatcttcaataaatattttgcaaataaaaaaggaaTGGGCCAtcgaaagagataaaaaactaattaaatcaaatcaagcTACGGCGACCGATGATGGTGCTGTGCGTTGTTTGCTGTGTGAAAAAAGATTTACAAAGCCACGATACGCGCAAAAACATATGCGCTTAATTCATGCCAAATCAGTGACAATAAATGAAGTTATCAGTGGTCAACCATCTATGGTCGCTGGTGATTATTATGAAGAATCTAAACAATTGGAAATGGATTTTAGTAATGAAACTGATGCAAAaccaattgtttcaaatgtatCTGAAGTGGCGaggaaaaaatttgaatgttttgattgtCACAAGAAATTTGTTAGCGCTAATTCCGTTcgaattcatatgaaattgcATAGTGGCATAAAGTATAAGTGCCCCTATTGTGACAATAaagttttttcaatgaaaagcTATGTTCGTGATCACATAACAATTATGCATGGCATTCGCAGAGAGGATATACCAAAAGACTGTATTCGACAAGCGTCTGGCAATTTTATATATCTACCACGTCCGAATGTGGCAATGTACGAGTGTTATTTGTGCCGAAATCAATATGCAAAACGAAATCGATTACGTGAGCATATGAATTCACACATTTCCGGTCCATATTTGTGTGTAATTTGTGGGGCTGTTTACAAATCAACGGATACACTTCGTCATCATATGGAAAAACATAAAGCAAATCCAAAAGAACCACATCAATGTGCTGAATGTGGTAAAATGTATCCAACGAGACGGTATATGTTATCCCATTATCGCACTATTCATCTAAATAAACGACGAAAGAAAGTTGCTCcagaaagaaaatatgatgTCATTTGTAAAATATGCGATAAGAAATTTTTAACACAACACAATCTCAAGCAACACATGATGGTCCATGATCGCGatccaaatgaattaatttgtcACATTTGTGGATGGGAATTCAAGGAAAGAAGCAATTTAAAGCAACACATGGAATCACatggaaataataaaacaacatGTGAACTTTGTAGTAAAGTCGTTTCGATTCGATATATGAAAGAGCATTTGAGAATTCATAGCGGTAATAAAGAGTTTCAATGCGCTGAATGTGGTAAACAGTTTGTGAGTAGGGAACGTCTTAAGCGGCATATGATTCGTCATTCTGGTGAAGCGAAATTTAAATGTGATCTTTGCACCAAAGCATACACGAGATCTGATAAGCTTCTATACCATCGCCGCACTCATGATCAACAAATGACACACACTTGTCAGCACTGCAAAAAAGGATTCTTTTCAATCAAAAGTTtgagaaaacatgaaaatttacactatttggaagaaaatggtataaaaaagccaaatacataa
Protein Sequence
MECVFVGESLIDINQLTNDGNHFEKLKIGEIFQLKDSTLSMCCIHCLQEFQYFTEFSLHIQEHYLRGEIAQLKEIKEEISTEAKNQDEFLQENLDIIIEPEVKCEVIENELFNDESMLDHWSDDDGDGDGDGDRDDDSLIEQKSDSTENTTEIPSETQSVVEGTDYEKIKNKFKCLTCDHETTKWNNLKKHLQIHSNSKKVVCPICSRLFNAVQYARKHVHRTHNINITTEEIRRAQPTSKTVTNIDRVQVQTKSKTERKTYTEGVEYRNIGDRFECLTCNRKMIKFDHMKEHLLTHTNEKNVLCPFCARSFLSEAYVRKHVNRTHKMKITGEEIKAAQSSINILQIKKEWAIERDKKLIKSNQATATDDGAVRCLLCEKRFTKPRYAQKHMRLIHAKSVTINEVISGQPSMVAGDYYEESKQLEMDFSNETDAKPIVSNVSEVARKKFECFDCHKKFVSANSVRIHMKLHSGIKYKCPYCDNKVFSMKSYVRDHITIMHGIRREDIPKDCIRQASGNFIYLPRPNVAMYECYLCRNQYAKRNRLREHMNSHISGPYLCVICGAVYKSTDTLRHHMEKHKANPKEPHQCAECGKMYPTRRYMLSHYRTIHLNKRRKKVAPERKYDVICKICDKKFLTQHNLKQHMMVHDRDPNELICHICGWEFKERSNLKQHMESHGNNKTTCELCSKVVSIRYMKEHLRIHSGNKEFQCAECGKQFVSRERLKRHMIRHSGEAKFKCDLCTKAYTRSDKLLYHRRTHDQQMTHTCQHCKKGFFSIKSLRKHENLHYLEENGIKKPNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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