Rmax014425.2
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- grau
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000634.1:518804-527162[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 5.5 5.2e+02 2.0 0.1 5 17 3 15 2 16 0.90 2 29 0.0072 0.68 11.1 1.0 1 23 242 264 242 264 0.97 3 29 0.00047 0.044 14.8 0.2 2 23 271 292 270 292 0.96 4 29 0.003 0.28 12.3 4.2 1 23 296 319 296 319 0.97 5 29 0.12 11 7.3 1.2 2 23 359 381 358 381 0.93 6 29 0.0022 0.21 12.7 2.2 1 23 414 436 414 436 0.98 7 29 0.00061 0.057 14.4 5.6 3 23 447 468 446 468 0.95 8 29 1.8 1.7e+02 3.5 0.4 2 23 495 517 494 517 0.93 9 29 0.00018 0.017 16.1 0.3 1 23 550 572 550 572 0.97 10 29 0.0012 0.11 13.6 1.0 1 23 580 602 580 602 0.98 11 29 0.0015 0.15 13.2 2.2 1 23 610 633 610 633 0.95 12 29 0.00066 0.062 14.3 0.2 3 23 644 665 643 665 0.97 13 29 0.19 18 6.6 0.4 2 23 676 697 676 697 0.96 14 29 0.52 50 5.2 2.1 2 23 703 725 702 725 0.92 15 29 0.00012 0.011 16.7 0.7 1 23 730 752 730 752 0.98 16 29 0.25 24 6.2 1.1 1 23 758 781 758 781 0.96 17 29 0.6 57 5.0 0.1 6 23 972 989 972 989 0.97 18 29 0.064 6 8.1 1.7 1 23 995 1017 995 1017 0.96 19 29 7.7e-06 0.00072 20.4 1.2 1 23 1023 1046 1023 1046 0.96 20 29 0.055 5.2 8.3 0.0 2 19 1056 1073 1056 1076 0.94 21 29 0.0001 0.0096 16.9 0.7 1 23 1201 1224 1201 1224 0.98 22 29 8e-05 0.0075 17.2 3.0 1 23 1307 1329 1307 1329 0.98 23 29 9.4e-05 0.0089 17.0 1.8 1 23 1337 1359 1337 1359 0.98 24 29 5.4 5.1e+02 2.0 1.8 1 23 1372 1395 1372 1395 0.82 25 29 0.0019 0.18 12.9 0.3 3 23 1407 1428 1406 1428 0.96 26 29 1.6e-05 0.0015 19.4 0.8 1 23 1438 1460 1438 1460 0.98 27 29 0.0066 0.62 11.2 1.7 2 23 1466 1488 1465 1488 0.97 28 29 4.9e-05 0.0046 17.9 2.2 1 23 1494 1516 1494 1516 0.98 29 29 0.74 70 4.7 0.5 1 23 1522 1545 1522 1545 0.95
Sequence Information
- Coding Sequence
- ATGAATATTTGTCGTTTGTGTTTTTCGTCACAGGCTCATCTCATTTATATCTACGATAATTCGAATATTGCCGAAATTATCAACGAACATATTGGCGAAGTAAGCATAACAGATTTATTACCAAAATGTGTATGTTCAAATTGTTGGAAGAAAACGgatgaatttcataaatttcatcgTTCCGTACGATATGCACAAGAAGAGTATTTAaagcaaaacataaaatcggaagttgaaattcaacatgaaaatgacaatgaaattgataataattccGGGGAAATAATGCAGCAACCAAATTTTGTTGAAGTCATTACCaattatgatgaatttaataatttcgttGATGAAAAACCAGATGAAAATTATGAGACAGATGATAAACTATATAAAACATACGAATTTAGAGATGTACTTAGCAATGATtcgaaaatggaattgaacGATGACAATGAAGAAGATAAAGAGGATTCAGAGTGCGATTCCATCATtagcacaaaatcaaatgacattgaTCCAAAAACAAGTAAGCAAATTTTTGAGCAACATTTCGATACAACATGTGATATATGCGCAATGGACCTAAAAACATTAAAACGTGCAATCACACACTATAATAAAGAGCACAAAATCGAAGAGGGTTACATCAAATGCTGTGGTCTTAAATTGAAACGTGACAATTTGGTCAACGATCATATCAGATGGCATATTAATCCTGATATTTTTAAgtgtaaatattgtaatcgAATAATGAAAACCAAGTTGTCATTATCGGCTCATATTGCAAACCATCGACATATGAAGAATTTAATTTGTGATATTTGCGGAAAGATATTTACACAAATTACCAAAATAAGATCACACATGTCTATTCATATAAAAACATTTGTGTGCcatatatgtgaaaaaaaTTGTTCAACTAAAGATCGACTTGACGAGCACATCAGATATTACCATAATCCAGATGCAGTTCGACAACAATTGGACAAATTGCGTgatgtaaaaaaacaaaaacaatttgatattaattttgtaaatgaaattgataatgtGGTTACCACacaatttgatatgaaatgtGATTATTGTGatgttaattttaaatcactTCAAGAAGCTCAATATCATTATATGCATGAGCATCAAATTGCTGACGGATACATTCAATGTTGTGGtttaaaatttagaaaaagcaTCAACATTGAAGGCCATGCTTTGTGGCATTTGAATCCAGAATTATTTGAATGCTGCATTTGTAAAAGGGTTTGTTCAACTGTACTTGCATTGCGTGCACATTTACGTGTGCATGAATCACGACAACAACCACAACAGAATGCATGCAAACTATgtgataaatcattttatatcaaaCATCATTTGACTAGACACATGAAATTTTCTCATGGAATCGTGACGGagaatcgaagaaaattgaataacattCATCCTGATTCGAAGagcataaaattatattttgatatgcaatgtgaaatttgtaaaattgaattgtctTCATTGCAACATGCAAAATTGCATTATTTAAATGCACATGATATTTCCGATGGTTACATTAAATGCTGTGAAATGAAGTTCAGAGAacttaaaaatatcaatgatcATCTTGAATATCATATGaatccaaatattttcaagTGTAAAATATGCTTGAAAGCATTTGGTCGGAAAGCGGATTTAAGTGCTCATGTATCTCAACATAGAGCTGTTGAAACAAAACGATTCAGTTGTAGTGAATGTGGCAAAGTATGGAAATCAAAATATCGATTGGAAATTCATAAACGATCACATGGTGAAAAAATAGCAAGAAATTTCCCATGTAATTATTGCAATAGAAAattttcaacagaaaaaacacaacaatcCCATATATTTCGAATTCACGAAGCAGACAAAGAAGCAAAAACGGAAATCTGTGAATATTGTGCAAAAACGTTCATTACGCGTAAAGAGGTACTGGCGCATATCAGAAGCATGCATACAGAAAATTCTGTTCGACGTGAACGAGCTCAATGTCAAATTTGTAGCGCTTGGCTGAGCAATCGATATACGCTTAAAGAACATATGATTCGGCATAGCTCCGAACCCCAAAAGTGTAATCAATGTGATAAAATCTCGCCAAATCAACATGCATTATTGTGTCATGTGAGAGAAGTGCATTGTGAGAGAATTTTTTCATGCCATTTGTGTTCGAAAACATTCAAAGCAGCCGTTGCTTTAAAGgATCATATTGCAACACACACTGgtgaaaaaatgcataaatgcTCTTTTTGCCCGGAAGCATTCATATGGCGACCAAACATGTATTCGCATCAAAAAAAAGCACACCCAGAAGagtggaaaaagaaacaaggCGAAGTGAAACAAGATGATTTATTACCAAAATACCTTTGCATTGTATGTTGGAATAAAACTGGAAAATTTCACTCATTTCATCGTGCCGTACAAACTGCTCAGGCCAATTATTTGCTACAATatgttaaaaatgatttgaatggaattgaaacaacaccaattaatgaaaatacaataaataataatccaATAAATTTGCCAAATTTTATCGAAGTACcacaaaatgttgatgaatatgaaaatgaacgaattgaTGCTGAATATGGAAATGTATTTcaagaaattgaatcaaatccaGTGCACAGTGGAACGGAATTTCTGACCGAAGTTAAAATTGGTCCAGTGCTAGaaaatgaagaagatgaagtcattgataaaaatggtaCCGTTATTGATGAATTGACCGATAAATCGAATATTGAACAAAGAAATGACACGAAATTTGATTACAAATGTGATGTGTGCGGTATTGATCAAGGCACATTTGAACAATCACTTTCGCATTATACAAATGAGCATAATCAGAATGGATACATCAAATGTTGTGGAAAGAAATTTTATAAAGCAACTACAGTTAATGACCATATCGAATGGCATAAAATGCCAGATATTTTTAAGTGTAAAATTTGTGGCGTTCAATTGGGCACGAAAAAATCATATTACAAGCATAAGAGTTGGCATAATGGACCACAACGGTTCATTTGTGATATATGTGATCGATCATTTAATTATAAagattcattaaaattgcacATGTACAGTTATCATATTAAAGGGAGAAATATTAATGAAGCAAAATGTCCAGCATGTTTGAAACGGTTTCCAACACCAAAATTGCTTGAGGCGCATGAAGCAGTGTGTCGTGGTCCAGATGCGGCACGTGTGGCCAAAGAGCagttaaatgatttaaaatgtataatatCGGCTTTGAGTACATCTGATATTCAAAGTGTTGTTGGAGAACATTTTGACATGAGTTGTGATTTGTGCGGTGATGATTTTATTGCCACATCACTTGTTCAATCACAGTTCCATTATATGAATGCGCATCAAGTGACTGATgGTTATATCAAATGTTGTGATTTGAGGCTTAAACATCAAGATCAAATACTTGACCATATTCCATACCATctgaatgaaaacatttgcaaGTGTAAAGTATGcggcaaagagaaaaaaaccattcgaCGAATTCGTTCACATTTAGATTTGCATACAAAACGTGATGCATATCGATGCAAAGTGTGTAATGCAAAATTTGTGCGTGAAACATATCTTGTAATACATATGAATCGAAATCATGTGAAAGTGAAACGATCAAAACCAATATTtaccaatgaaaataaaccgGATCCGAAGGAGTATTTCAACATGCGTTGCGATCATAGAGATTGTAAAAATGTGATATTCACTTCATTACAGCATGCAAAAGTGCATTATATGCAAGAGCATGACAATCCAGATGGATACATTAAATGCTGTGGAATTGCTTGTAAAACGAGTGCTGAAGTTGATGATCATTTACTAATCCATATGAATCCAAGCCATTTCAAATGTATGTACTgtggaaaattgtttaatacaaaaaaatcgCTTACATCGCATGTATCAAAGCATAAAGCAATCGAGTCAAAATTGTATAGTTGCAAAATATGCGAAAAGTCGTTTGCATCAAATCATGATgtcaaaattcatgaaaaatcacATCAAGAGAAAATTgacgagaagaaaaatgagccaaattattcatgttcattttgtcTACGGAAATTCAAAAGTGAAACGGTGAAAAAATCCCATGAAGATCGtatccatttgaaaatccaAACTGAAAATAGCCAAGagatttgtgaattttgtgcTAAGCAATTTCGAACAAAGGCTGATGttgaaaaacacattcaaaaaatacattcaccGGATGGAAAACCGCGtccaatattcaaatgtgaaatatgtGATGCAACGCTTACCAATCAATATACACTTAAAACGCATATGATAAAACATTCatcaaatccaaaaaaatGTCCGCATTGTTATAAATTGTCGCCAAATGAAAGTGCTCTAAATCAGCATATTAAAAAGAATCATTGGCAAAAGCCAATtcataaatgtaatttatgcGATAAGTCATTCAAAGAAATCACTTCGCTCAAGAGTCACATTGCAACACATACCGGTGAAAAgatatttaaatgttcatattGTCCAGATGAATTTGTGTGGCGACCGAATATGTATGCACatcagaaaaaaatgcatccaACTGAATgggccgaaaaaaaaaacaaaagaataaccATTccgaaaattaacaaataa
- Protein Sequence
- MNICRLCFSSQAHLIYIYDNSNIAEIINEHIGEVSITDLLPKCVCSNCWKKTDEFHKFHRSVRYAQEEYLKQNIKSEVEIQHENDNEIDNNSGEIMQQPNFVEVITNYDEFNNFVDEKPDENYETDDKLYKTYEFRDVLSNDSKMELNDDNEEDKEDSECDSIISTKSNDIDPKTSKQIFEQHFDTTCDICAMDLKTLKRAITHYNKEHKIEEGYIKCCGLKLKRDNLVNDHIRWHINPDIFKCKYCNRIMKTKLSLSAHIANHRHMKNLICDICGKIFTQITKIRSHMSIHIKTFVCHICEKNCSTKDRLDEHIRYYHNPDAVRQQLDKLRDVKKQKQFDINFVNEIDNVVTTQFDMKCDYCDVNFKSLQEAQYHYMHEHQIADGYIQCCGLKFRKSINIEGHALWHLNPELFECCICKRVCSTVLALRAHLRVHESRQQPQQNACKLCDKSFYIKHHLTRHMKFSHGIVTENRRKLNNIHPDSKSIKLYFDMQCEICKIELSSLQHAKLHYLNAHDISDGYIKCCEMKFRELKNINDHLEYHMNPNIFKCKICLKAFGRKADLSAHVSQHRAVETKRFSCSECGKVWKSKYRLEIHKRSHGEKIARNFPCNYCNRKFSTEKTQQSHIFRIHEADKEAKTEICEYCAKTFITRKEVLAHIRSMHTENSVRRERAQCQICSAWLSNRYTLKEHMIRHSSEPQKCNQCDKISPNQHALLCHVREVHCERIFSCHLCSKTFKAAVALKDHIATHTGEKMHKCSFCPEAFIWRPNMYSHQKKAHPEEWKKKQGEVKQDDLLPKYLCIVCWNKTGKFHSFHRAVQTAQANYLLQYVKNDLNGIETTPINENTINNNPINLPNFIEVPQNVDEYENERIDAEYGNVFQEIESNPVHSGTEFLTEVKIGPVLENEEDEVIDKNGTVIDELTDKSNIEQRNDTKFDYKCDVCGIDQGTFEQSLSHYTNEHNQNGYIKCCGKKFYKATTVNDHIEWHKMPDIFKCKICGVQLGTKKSYYKHKSWHNGPQRFICDICDRSFNYKDSLKLHMYSYHIKGRNINEAKCPACLKRFPTPKLLEAHEAVCRGPDAARVAKEQLNDLKCIISALSTSDIQSVVGEHFDMSCDLCGDDFIATSLVQSQFHYMNAHQVTDGYIKCCDLRLKHQDQILDHIPYHLNENICKCKVCGKEKKTIRRIRSHLDLHTKRDAYRCKVCNAKFVRETYLVIHMNRNHVKVKRSKPIFTNENKPDPKEYFNMRCDHRDCKNVIFTSLQHAKVHYMQEHDNPDGYIKCCGIACKTSAEVDDHLLIHMNPSHFKCMYCGKLFNTKKSLTSHVSKHKAIESKLYSCKICEKSFASNHDVKIHEKSHQEKIDEKKNEPNYSCSFCLRKFKSETVKKSHEDRIHLKIQTENSQEICEFCAKQFRTKADVEKHIQKIHSPDGKPRPIFKCEICDATLTNQYTLKTHMIKHSSNPKKCPHCYKLSPNESALNQHIKKNHWQKPIHKCNLCDKSFKEITSLKSHIATHTGEKIFKCSYCPDEFVWRPNMYAHQKKMHPTEWAEKKNKRITIPKINK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -