Rmax015460.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- -
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000674.1:151094-155911[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9e-05 0.0018 19.2 0.9 1 23 158 180 158 180 0.95 2 15 0.00037 0.035 15.1 0.3 2 23 187 208 187 208 0.97 3 15 3.6e-05 0.0034 18.3 0.1 1 23 294 316 294 316 0.96 4 15 0.0019 0.18 12.9 0.1 2 23 323 344 322 344 0.97 5 15 3.1e-06 0.00029 21.7 1.7 1 23 374 396 374 396 0.98 6 15 0.02 1.9 9.7 1.1 1 23 412 434 412 434 0.94 7 15 0.0017 0.16 13.0 0.7 2 23 441 463 440 463 0.96 8 15 0.063 6 8.1 2.6 2 19 471 488 470 489 0.95 9 15 4.4e-06 0.00042 21.2 4.0 1 23 498 520 498 520 0.97 10 15 0.0025 0.24 12.5 0.6 2 23 526 547 525 547 0.96 11 15 4.2e-06 0.00039 21.3 0.5 1 23 555 577 555 577 0.98 12 15 0.004 0.38 11.9 0.2 3 23 585 605 583 605 0.97 13 15 1.7e-05 0.0016 19.3 0.2 1 23 611 633 611 634 0.95 14 15 0.012 1.1 10.4 0.2 1 23 648 670 648 670 0.96 15 15 0.0024 0.23 12.6 0.0 1 20 1007 1026 1007 1029 0.93
Sequence Information
- Coding Sequence
- ATGGATCCAGAGTATGAAATAACATGGGCAGATGGCGTAAGCCATGACGAGCATGGCCATCAAATTATATGCGAATCTCGTTCTGATGATTTAATCGAAGAGAATAATGATATCGAAGAAGATGAAGAGTATTTGGTTGGCGAAGAGATAATTCCATCAACgggaattatttcaatatcgAATAGTTTGGATCAAATAGCTGccgaaaatttaatttatatggCACAAGATGGAAGTGTGGCAAATATGGGTGATTTAATTGAGGAACAAGTCGATCAAGTGGACAATGCTGACTACAATGAGCAACAGTATTTTGAGTGTCATGTCACAGAAGAGGTGATCACCGACGATTGGGTGCAACAACAGGGTGAAGATAGAGTTGAAGTGCCAGTTTACCAATTGGTTGGCAATGAGCAAAGTGAAGAGGTTTTAGTGCCGCTGCCAACTGATGAATATACAACTTCACGTCCATATCCGTGTGATTTTTGTAGCCGTCGTTTTCGTAAAAAGGCCAATCTAACGAATCACATGGTTGCACATCGAAATGTAAAGCCAAATACATGTAATTTATGTGGTGCTAGTTACATTCGCAAAATGGAATTAATGAACCATTTAAAAGAGCACGCTCAAGTGCCTGATCCAAGTATGGAATACATGAGTCCAAATGATGGAAAAAGTGAggaagatgatgatgacgaaTCACTATTAACTGTATTGCATACAAGTGAATCGCCAAATAAGCAACGTCGACGAATTGCTCAGACTAGTACAAGTACGCAAAGAAAATCGACGAAAGCAAATGATAGTGGTAAACGAAAATCTCATAATTATGAGTCAATTTTGCCAGATCATATACCATCACTAGATCCAAGTAAACCGTTTGTATGCCAAGTATGTGGTGTTAGTTTTAGCCGTGAAAAAGCCTTAAATGCACACGTTTCATTGCATGGTGTTGACAATGCACTGGAATGTGATACATGTAATGAAGTATTTTGGACAGCCGAATCATTACAAGAACATCAAAAAATTCATGCAGAAGAAGAGAGTAGCGGATCAGAATATGAACCAGATGGTGACAAAACAGCAAGTGAAgatgattttgattcaaaatatggaaattaCTATTGTAATGTGTGTGGCATGTCTTTTCATCGGCCTGAATTGCTAAAACGGCATGCAAAAACACATACTAATGATTATGATTCAAGTCGAAATGACAGCGCCGGTGAAAATCATTGTTGCAACGTTTGCGGATGCACATTCGCTGAAGCACTCGATTTACTTGCTCATGCTGAAATTCATACCAGAAACTCAATTCAAAAGTGCACATTATGCGGAGAATCATTCACACATGATAACGAAATTCGACAACACATTGTCACGGCACATGAAAACGAAATCACAAGCACAACCTGTCAATTGTGTGGAAAGCATTGTAAAGATGAACGAACACTGTTGAAACATGCATGGGATCATtccaaagagaaaaatcattCCTGCGGGAAGTgtggaaaaacattttacaataaagCACGACTCAAACGTCACATGCAATCACATCGAAACAAATCAGTCAGTTGCAATGTTTGTGGTGAAAATTTTCCAGATGGACGCAGTTTAATGAATCATCGACATTCGCATACCAATTTGTCTGGGCGACAATTTCCGTGTCGCGAATGTGGTAAAACATTTGGATCACGAAGTTCACAACAAATTCACATGCGAATTCATACAGGTGAACGACCGTATGGCTGTCGATTTTGCTGGAAAGCCTTTGCAGATGGTGGCACTTTGCGCAAACATGAACGTATCCACACAGgTGAAAAACCTTACGCATGTCCCGTATGTCCGAGAGCATTCAATCAGCGTGTTGTTCTACGTGAACATATTCGTTCACATCATTCGCAACCTGATCCAAATTACGAAGATTCATTAATGCCATATTATTGCACAGTTTGTGGGAACCTCTTCAAAACATCACAGGAAATTATTCAACACTTGATCGAACACAGTGATGCAAATACCGTATCAAATCGACAACCAGTtGTTGGACCTCGCAAATATAAACGTCGTCGTAAACTAAAGCCAGAAGAGTTGGAATCGTTTCGCAAATCAAAAACCGAAACGGCAACAacgtcaacaacaacaaaaacaacatcaaaacgATCATCTCGCAAACGAGATGTATCTGAACAGAGTGATAATTACTATAGTTCATCATATGAACCGCAAGAAGATGTAAATTATGAGTCCAGTCGAAATGATATCGAAATCGACCACATTGAAGTAGATGAGCCGGTTGTACAACGAGTGCAAGGCGTTGGATCACGTTACAAGCACAATTCCGATCCACTTTATGCCGGAGAACACCTCGCAACTTCACCCAAACGAAAGTCAAATAAGAGACAACAATCATCAGTGCAAATGGTGGAAGTTGCAACGCCATCATCTTCACAGCGTCAGGCGCGTTTAATTCATACCAGTAAGAAAAAAGTCGTGGTGGAAACAAAAGGTGGTCGAACATCgaccaaaatgaaaacaatagtgacgacaaatgaaataaaaaaaacgacatcCGAAATGGACAATGGTGCGACGCGTCGATCAAGTCGAACAAAACCTCAAAAAACTCAATTGATGCCATCGCCATTTAGATCACTCACCAATGGAACATCAAAAAAAGCCAAATCTGAAACAACTTCCATGTCAAATTCCAAATCTCAAAGTAATTTACTTTCTGAATTATCAAAAAAGAGTTCGAATTTTAATCAGGATGTTGTAAGCGATTTGGAGGAAATTTTGGGATCGCCAATTAAAACAACacgaacgaaaataaaaaccgaacAAGccGCAACTTCATTCAATGCGGATATATTAAGCGAAGAAGAAAGTCAAGAAAGCCAAGATGAGGCATATGAAAATGTAGAAATGGCCAATAATTCAGGCACTGATAATATTATCATGAATATTAAACAAGAGAAAGAGGTTTCATACACAATGACAgatgataataatttgtttacatGTGAGATGTGCTCAGCCGTATTCACCGATCGAGCACAATTACTAGTACATGTTCCTGTACATATTTAA
- Protein Sequence
- MDPEYEITWADGVSHDEHGHQIICESRSDDLIEENNDIEEDEEYLVGEEIIPSTGIISISNSLDQIAAENLIYMAQDGSVANMGDLIEEQVDQVDNADYNEQQYFECHVTEEVITDDWVQQQGEDRVEVPVYQLVGNEQSEEVLVPLPTDEYTTSRPYPCDFCSRRFRKKANLTNHMVAHRNVKPNTCNLCGASYIRKMELMNHLKEHAQVPDPSMEYMSPNDGKSEEDDDDESLLTVLHTSESPNKQRRRIAQTSTSTQRKSTKANDSGKRKSHNYESILPDHIPSLDPSKPFVCQVCGVSFSREKALNAHVSLHGVDNALECDTCNEVFWTAESLQEHQKIHAEEESSGSEYEPDGDKTASEDDFDSKYGNYYCNVCGMSFHRPELLKRHAKTHTNDYDSSRNDSAGENHCCNVCGCTFAEALDLLAHAEIHTRNSIQKCTLCGESFTHDNEIRQHIVTAHENEITSTTCQLCGKHCKDERTLLKHAWDHSKEKNHSCGKCGKTFYNKARLKRHMQSHRNKSVSCNVCGENFPDGRSLMNHRHSHTNLSGRQFPCRECGKTFGSRSSQQIHMRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACPVCPRAFNQRVVLREHIRSHHSQPDPNYEDSLMPYYCTVCGNLFKTSQEIIQHLIEHSDANTVSNRQPVVGPRKYKRRRKLKPEELESFRKSKTETATTSTTTKTTSKRSSRKRDVSEQSDNYYSSSYEPQEDVNYESSRNDIEIDHIEVDEPVVQRVQGVGSRYKHNSDPLYAGEHLATSPKRKSNKRQQSSVQMVEVATPSSSQRQARLIHTSKKKVVVETKGGRTSTKMKTIVTTNEIKKTTSEMDNGATRRSSRTKPQKTQLMPSPFRSLTNGTSKKAKSETTSMSNSKSQSNLLSELSKKSSNFNQDVVSDLEEILGSPIKTTRTKIKTEQAATSFNADILSEEESQESQDEAYENVEMANNSGTDNIIMNIKQEKEVSYTMTDDNNLFTCEMCSAVFTDRAQLLVHVPVHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -