Basic Information

Insect: Resseliella maxima
Gene Symbol: -
Assembly: GCA_029041755.1
Location: JAQOWM010000182.1:141213-144032[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1e-05 0.00095 20.0 2.8 1 23 223 245 223 245 0.99

2 20 7.5e-06 0.00071 20.5 1.0 1 23 251 274 251 274 0.94

3 20 6.6e-05 0.0063 17.5 3.1 1 23 293 315 293 315 0.99

4 20 0.0034 0.32 12.1 9.3 1 23 321 344 321 344 0.97

5 20 7.3e-05 0.0069 17.3 0.3 2 23 429 451 428 451 0.94

6 20 3.3e-06 0.00031 21.6 2.3 1 23 470 492 470 492 0.99

7 20 0.00064 0.061 14.4 1.0 1 23 498 521 498 521 0.97

8 20 6.9e-05 0.0065 17.4 2.3 3 23 555 575 554 575 0.98

9 20 0.0015 0.14 13.2 0.5 1 23 581 604 581 604 0.90

10 20 0.018 1.7 9.8 2.3 2 23 612 633 611 633 0.97

11 20 0.05 4.7 8.4 4.9 1 23 639 661 639 661 0.90

12 20 1.2 1.1e+02 4.1 1.5 1 13 667 679 667 689 0.74

13 20 0.0014 0.13 13.3 1.2 1 20 695 714 695 716 0.94

14 20 0.0043 0.41 11.8 0.4 1 23 731 753 731 753 0.92

15 20 0.031 3 9.1 1.9 1 23 767 790 767 790 0.96

16 20 0.00027 0.026 15.5 0.2 1 23 799 821 799 821 0.99

17 20 0.00049 0.047 14.7 0.6 2 23 828 849 827 849 0.96

18 20 0.0045 0.43 11.7 3.2 1 23 855 879 855 879 0.96

19 20 1.5e-05 0.0014 19.5 2.7 1 23 885 907 885 907 0.97

20 20 0.00017 0.016 16.2 3.8 1 23 912 935 912 935 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1e-05	0.00095	20.0	2.8	1	23	223	245	223	245	0.99
2	20	7.5e-06	0.00071	20.5	1.0	1	23	251	274	251	274	0.94
3	20	6.6e-05	0.0063	17.5	3.1	1	23	293	315	293	315	0.99
4	20	0.0034	0.32	12.1	9.3	1	23	321	344	321	344	0.97
5	20	7.3e-05	0.0069	17.3	0.3	2	23	429	451	428	451	0.94
6	20	3.3e-06	0.00031	21.6	2.3	1	23	470	492	470	492	0.99
7	20	0.00064	0.061	14.4	1.0	1	23	498	521	498	521	0.97
8	20	6.9e-05	0.0065	17.4	2.3	3	23	555	575	554	575	0.98
9	20	0.0015	0.14	13.2	0.5	1	23	581	604	581	604	0.90
10	20	0.018	1.7	9.8	2.3	2	23	612	633	611	633	0.97
11	20	0.05	4.7	8.4	4.9	1	23	639	661	639	661	0.90
12	20	1.2	1.1e+02	4.1	1.5	1	13	667	679	667	689	0.74
13	20	0.0014	0.13	13.3	1.2	1	20	695	714	695	716	0.94
14	20	0.0043	0.41	11.8	0.4	1	23	731	753	731	753	0.92
15	20	0.031	3	9.1	1.9	1	23	767	790	767	790	0.96
16	20	0.00027	0.026	15.5	0.2	1	23	799	821	799	821	0.99
17	20	0.00049	0.047	14.7	0.6	2	23	828	849	827	849	0.96
18	20	0.0045	0.43	11.7	3.2	1	23	855	879	855	879	0.96
19	20	1.5e-05	0.0014	19.5	2.7	1	23	885	907	885	907	0.97
20	20	0.00017	0.016	16.2	3.8	1	23	912	935	912	935	0.95

Sequence Information

Coding Sequence: ATGGAAGTGTTCGGTGTAGACGACTCACAAATATTCGAATCAGAGATAAtcattgatgaaattaaaatcgaaccggaatttgaatttgttgatcCATTAAGTCGTTTAGATAATATCgccaattcaattgtttctacatcaaatgaattgattcaatgtgaaaagaaTCCATTATTAGTTGAGGTTGATGCAACACAAATTGgcaaattaaatacatttgaagATGTATCACATATATATAATCaaagcatttcaattgaatcaaattatgtTTCAACAATTCTACaaacaattgataatttaaaatcagATGAATGTATTCTGGTAAAAGATGAAGATGAACATCATCAAGAGATAAATAGCCAAATAGAAGAAgatcaacaaattcaatgtcaaGAAGATcaacaaaatgtgcaaaatcaacgaaatcaaaaaaatcaacaaaatcaaaattcaaataacaaaaaaagaaaaatgaatcattgtAAGCCGTTCGGTTGTATATTTTGTCCAAAACGTTGTTCACTTTTGGGTAATATAAAACCGCATATACAATCAAAACATGCCGATAAAATGGCTGAATTTCTTCAATTGCGAAAAGATGGACTTggttataaattttttaaatcaaacgAACCGGATGAATTGCAATCTATTCCAAAACAATACACATGCCAATAttgttcgaaaattttttcaaataatacatCAATCAAACGACATTTGCAAACACATACCGGTGAAAAGCCATTTGTATGCCCATATTGTTCGAAATCAACATctacaaaatggaatttaaaatcACACATCTATAATCTACATCCAGAAAAGAGTAATATCGATGAAATCGAAGAATTAAAATCACCATATGCAAGATATCAATGTGGATTTTGTAATGAAGTATTAAAAACTAAACTGAATTTAAAACATCATTTGCGTACTCATGCCGATGGCAAACTATATGAATGTTtatattgtaaaaaatgttgtacatatgaatgtaatttaaaaCGGCATATTCAATCGATGCATGCGGAAAAAATCGACGAATatcttaaaatgaaaaaagatggATTGGGTTTTATTATTTCTGAATCAAATATACTTGATAAATcacaagaaataaataaatcatgtGATATGGATAAtaacaatgataataatgatcaAGAAGATCAAATAGAAAttcatgaagaaaaattcaatatagaTTCAGTAGATGAAATCAATGAGAAGAATGATGAAAGTGAAGTGATAATCGCAAATACATCAACGCAACAAGTTAAATGTCCGTATtgttcaaaatcaataaaatcaagagCAAATCTAAGAACACATATTGATAACGTACATCCAGAGTATTTACCAGCAGAAAGGCGtgaaaaattggcaaattataagcaaaaatataaatgtgacatttgtGGACGAACGACATGTTCAAAAATAACATTAGAAATTCACATGCGAAAGCATACCGGTGATAAGCCATATGAATGTTCATATTGTGGTAAACGAACTTCATATGAAACAAGTCTAAAGCCACATATTCAACGAAATCATCCTGATAAATTGGCTGAATATTTGGAACAATACAAAGCACAAAAAGCTGAATTAAAAGcacaacaaaaacgaaacaatgACGATGAAATTCAAGTTGATTGCCATACATGTGATAAAtcatttacaacaaaaacattatattATGAACATATTCAAGTGCATGCCAATGAATTGccatttaaatgtgaaaaatgtccTGATATGTTTCGTCAACAATCACAATTATTAGATCATGAAgatcaaatgcatttaaatcgTTTAAATGAAAGTGAATGTACGATTTGTTGTAAGCAATTATCAAATCCAAAAACATTAAAActtcatatgaaaattcatgtaaatgaacgaaattttgaatgtgaattttgtcAAAAGCgttttaaaacaaaagcatcactttattttcacaaacatGTGCATACGCTTGAAAAGAAATTCCAATGCTCATATTGTCCGCAAAAATTTTTACGAAAACAAATTCGTGAAAGACATGAATATACGCATCGTGAAGCGTATCGttttaattgtgaaaattgttcaaaacgATTTCGTACCGAAGATGAATTTAATCaacataaagaaaataaaaatgcaaaaggtCAATTacaatgtgaatttaatttgaaatttttatgcGCATATTGCCCCAAAAAGTATCGTTCAAAGCAAGCATTGggaaaacatgaaatattacatacaattccattgattgaacgacaaaaacaacgacaaaaatatgaatgcaatttttgcgGTAAAATCTATTTATCGCGATTTAGTTTTAAActtcatttacaaaataatcacGATAACATAAATGGTCCAAAATATTATCGATGCGATTTATGTAATATTGAATTAGTTTCAAAAGGTTCATTGCAACGGCATGAAcgcattcataaaaatgataaaaccgtcgaatgcacattttgttcaaaacgTTTCTATTTCCCAAGAGATTTAAAAGATCATTTACTTATTCATACCGGAGAAAAACCACATAAATGTACTTATCCGGGTTGCACAAAATCATTTCGAGTTCGGCAAACATTAAATACACACAAAGTTACTCATACCGATATAAGGCCATTTGATTGTAgctattgtaaaaaaaaatttcgacgACAAATACATCTTGATGctcacatacaaattcatacagaaaaaaaattcaaatgcaaatgctgTGATAGGAAATTTGCACGGAAAGGTGATTTAAATCGACACATGATTCAACAACATTCAGACAAAGATTAA
Protein Sequence: MEVFGVDDSQIFESEIIIDEIKIEPEFEFVDPLSRLDNIANSIVSTSNELIQCEKNPLLVEVDATQIGKLNTFEDVSHIYNQSISIESNYVSTILQTIDNLKSDECILVKDEDEHHQEINSQIEEDQQIQCQEDQQNVQNQRNQKNQQNQNSNNKKRKMNHCKPFGCIFCPKRCSLLGNIKPHIQSKHADKMAEFLQLRKDGLGYKFFKSNEPDELQSIPKQYTCQYCSKIFSNNTSIKRHLQTHTGEKPFVCPYCSKSTSTKWNLKSHIYNLHPEKSNIDEIEELKSPYARYQCGFCNEVLKTKLNLKHHLRTHADGKLYECLYCKKCCTYECNLKRHIQSMHAEKIDEYLKMKKDGLGFIISESNILDKSQEINKSCDMDNNNDNNDQEDQIEIHEEKFNIDSVDEINEKNDESEVIIANTSTQQVKCPYCSKSIKSRANLRTHIDNVHPEYLPAERREKLANYKQKYKCDICGRTTCSKITLEIHMRKHTGDKPYECSYCGKRTSYETSLKPHIQRNHPDKLAEYLEQYKAQKAELKAQQKRNNDDEIQVDCHTCDKSFTTKTLYYEHIQVHANELPFKCEKCPDMFRQQSQLLDHEDQMHLNRLNESECTICCKQLSNPKTLKLHMKIHVNERNFECEFCQKRFKTKASLYFHKHVHTLEKKFQCSYCPQKFLRKQIRERHEYTHREAYRFNCENCSKRFRTEDEFNQHKENKNAKGQLQCEFNLKFLCAYCPKKYRSKQALGKHEILHTIPLIERQKQRQKYECNFCGKIYLSRFSFKLHLQNNHDNINGPKYYRCDLCNIELVSKGSLQRHERIHKNDKTVECTFCSKRFYFPRDLKDHLLIHTGEKPHKCTYPGCTKSFRVRQTLNTHKVTHTDIRPFDCSYCKKKFRRQIHLDAHIQIHTEKKFKCKCCDRKFARKGDLNRHMIQQHSDKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -