Basic Information

Gene Symbol
Hr38
Assembly
GCA_029041755.1
Location
JAQOWM010000738.1:1014867-1022937[-]

Transcription Factor Domain

TF Family
ESR
Domain
zf-C4|ESR-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.019 1.7e+02 2.2 0.8 13 66 58 111 52 125 0.72
2 3 0.086 7.7e+02 0.1 7.3 8 40 181 211 174 239 0.44
3 3 3.6e-39 3.2e-35 122.7 0.0 1 268 495 754 495 758 0.92

Sequence Information

Coding Sequence
ATGCTGCTTCTTCAGCCGCAGAATTTTTCGAGTTCagtttcttcatttgatcctttatcatcttcatcatcacaACCACAATCACAAGACCAATTCCAACAGCAAACATCACAATCGCAGCAATTTTTCGCGGATTCATCTGATATCTTTTCGGATATTATATTTGgtcagcagcagcagcagcagcagcagcagcaacaacagccGCCTgtacaatcaaatcaattacatCCGCAACACCAATCGATCGATTATAATTTTTCccaatcaaatcgatttgttGAACATTCCAATTCATCGAACGAAACACTTATAGGTAATACAGAAAATTCATCACATTTTGGTTCAAACGATAGCATACCCAATTCGTTGGCACTTCCATATCCACATCCACATCAACCACTTCAAACacaacatttaattgaaagtgaacaaaataaaaaactctTTTTTGATCGTGATTCGGAAGATTTGAGCTTATTGACACTTCGATCGAATAGCGATCCAACGATTGCATTGCATAGTTTGCAAAGGGCAcgattacaacaacaacaacagcagcagcagcaacaacaacaacaacaacaacaacagcaacagcaacagcaacagcaacagcagcaacacaACATCGCATTGACAGATATTTCACAAAACGCCCCAGTGCCATCACAAACGAATCAACCAAGTGCAGCCGCATTACTTGAATCGTCACTTCCAAGCTTTCAAGAAACTTACCCTATTAAATACAATCAATTGGAGACATTCGGTCTTAAAATGGATGAAGATTGTTATATGGCACCAAATCATCAATCCAATATGAACTATCATCATGGGCACGGTCATCAGCATCATGTTATGCATCAAgatcattttgaatatcaacaaaatccaTCGCAATTTATGgcacaaaatttttattcatatgaaCAACAGCAAATGtATGGAGCGCCGATGCCACCACAAGATAGTTTTTCGTTGCCACCATTCCCAAATGTAACCGATTTGCATGGAAATGTAAATCAACATCGTCGTGCATCGTTACCATTACAACGATCCGAATCAACATCAAGTACGGAAAGTTCCAAAACAACacgattaaatttattaaaatcaataccAAGTGCATCAAGTTCTGCTTCCAGTTCACCGAATTGCATTACAAATTTAGCAACAGCCGTTGcaataaataacaatgatCCATCAATTTTATCGCGTAATATAACAACCGTTATACCACAACAACCATTACCACAAAGTCCGTCACAATTATGTGCGGTTTGTGGTGATACAGCTGCATGTCAACATTATGGTGTACGCACATGTGAAGGTTGCAAAGGATTTTTCAAACGAACCGTACAAAAAGGTTCAAAATATGTTTGCTTGGCAGACAAAGCGTGTCCAGTTGATAAGCGACGACGAAATCGATGCCAATTTTGCCGTTTTCAAAAATGTCTTACCGTTGGCATGGTCAAAGAAGTTGTACGAACTGATTCGTTAAAAGGACGTCGCGGACGTTTACcatcaaaaccaaaatcaccACAAGAATCACCACCGAGTCCGCCAGTTTCATTAATTACCGCATTGGTTCGTGCCCATGTTGATACAACGCCCGATTTAACAAATTTAGATTATTCTCAGTATTGTGATACTGCTGCTGTATATGATCAATCAATGACCGAAGCagagaaaattaaacaattttacaatctATTGACAACATCATTTGATGTGATTAAACATTTTGCTGAAAAATTGCCCGGCTTTTCGGATATATGTATTGAAGATCAAGAGCTACTTTTCCAAGCAGCCGCACTCGAATTATTTGTATTGCGTATGTCTTATCGTGCACAATATGATGatacaaaaattacattctGCAATGGCATTGTATTGCATCGTGTGCAATGTCAACGCGCATTTGGCGAATGGCTTAATGCCATTATGGAGTTTAGCCGCAGTTTGCATAtgcttgaaattgatatttcagCATTTGCATGTCTATGTGCATTGACGCTTGTCACAGAACGTCATGGTATTCGTGAACCCAAGAAAGTTgaacaattgcaaatgaaaataatcggCAGTCTTCGTGATCATGTGACATATAATGCTGAAGCACAAAGGAAACCGCACTATTTTAGCCATATTTTGGGTAAATTACCGGAACTACGATCGCTAAGTATGCAGGGAATGCAACGAATCTTCTATTTAAAATTAGAAGATTTGGTTCCAGCACCGCCactcattgaaaatatgtttgtaaGCAGTTTGCCATTTTAA
Protein Sequence
MLLLQPQNFSSSVSSFDPLSSSSSQPQSQDQFQQQTSQSQQFFADSSDIFSDIIFGQQQQQQQQQQQQPPVQSNQLHPQHQSIDYNFSQSNRFVEHSNSSNETLIGNTENSSHFGSNDSIPNSLALPYPHPHQPLQTQHLIESEQNKKLFFDRDSEDLSLLTLRSNSDPTIALHSLQRARLQQQQQQQQQQQQQQQQQQQQQQQQQQQHNIALTDISQNAPVPSQTNQPSAAALLESSLPSFQETYPIKYNQLETFGLKMDEDCYMAPNHQSNMNYHHGHGHQHHVMHQDHFEYQQNPSQFMAQNFYSYEQQQMYGAPMPPQDSFSLPPFPNVTDLHGNVNQHRRASLPLQRSESTSSTESSKTTRLNLLKSIPSASSSASSSPNCITNLATAVAINNNDPSILSRNITTVIPQQPLPQSPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLTVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLTNLDYSQYCDTAAVYDQSMTEAEKIKQFYNLLTTSFDVIKHFAEKLPGFSDICIEDQELLFQAAALELFVLRMSYRAQYDDTKITFCNGIVLHRVQCQRAFGEWLNAIMEFSRSLHMLEIDISAFACLCALTLVTERHGIREPKKVEQLQMKIIGSLRDHVTYNAEAQRKPHYFSHILGKLPELRSLSMQGMQRIFYLKLEDLVPAPPLIENMFVSSLPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00133333;
90% Identity
iTF_01288173; iTF_01288247;
80% Identity
iTF_01288173; iTF_01288247;