Rmax016231.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- bab2
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000704.1:96905-99894[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-08 0.00015 21.9 0.0 2 38 525 560 524 565 0.88
Sequence Information
- Coding Sequence
- ATGACCGGAATTTCGCAACAATTTTGTGTGAGATGGAATTCACATCTTGGGAGTCTGGGTGCCGCATTTCCACAGCTATTGGCTGGACAACAATTTGTTGACGTTACATTGGCTTGTGATGGTCATCAGGTGCATTGTCATCGTTTGGTACTGGCCGCATGTTCCAGCTATTTTGAAAGTTTGCTCAGTGAAAATCCATGCAAGCATCCAATTATTATATTGCCAAAAGATATAAAATTATGGGAAATTCATGCATTGGTCGATTTTATGTATAAAGGGCAAGTGAATGTATCACAGGCTGGCCTACCGCAATTATTAAAATGTGCCGAAACACTACAAATTCGTGGTTTATGCGGTACGGAATCATCATTAAATGAAGTTgccaatggaaaaattgatcGTTGcgattcaaacattttaaccAACAATTGTAgtccaaattttaatttcacatcAATGTTTGCATCAAACTTATTAAATAATACAAACTATCAATCGGACGAAGATCAACAATTTCGTCAACAGCATTACGATTTAACAACAACgcgttcaacattttcaacaatcaatgataataattccaaatcaacaaatcatcgctcaaatgaaacaactcatgcgaaaaataaaaacagccaaaaaattcaacacacaACCAATAAAACAACCAAAGAACATGGCAACGGTGCAAATAAAAACAGTTTGAtacgattgaatgaaaacgaaacCAGCAACACTGGCTCCAGTGAAGTTAACATCAAATGCGAAGAAATTGATTCTGATCCAAATGTAGCTGATGATGGTATGGATGATGATCTCGAtgaacattcaaattcaaaacaatcagaATATACGATGCAACAAAATGATGCCATCGTCGTAGACAAtgatttgcatataaattgtGATGGTACAAAACAAACAACCGATTCAAATGCACAAATGCATGAGATTTTTACCAACGATACAGATACAATATCGATAACAAAGAATGATTCAATTGACGAGATGAATATGTGCTATAGTCCAAGTTGGAGTTTGCATGGTGATGATGGTGGCGGTGATCATGTTCGAAATTCGATGAATGATTATGACTGTGATACGCAACAATTGCCTacatcattaaaatttaatcgaaatacGATGAGCATTTTTGTAAAACGTTcgaatcaaatcaatacaacaatcaatcatgaacattattcaaatacaacacAACCATGTAACAATGCAACATCGACCGATTTCAGTGAAGATAGTGTGAATATAGTTTGTTCGCCAAATTTTAGTGGTATTGAACGTGATACAAAACATGATATGATTGAGTATAATACGTCGAACAGATCATATCGAAGATTGGGTTTCAATGCAAACCGTCACATGGATGACATACAATCAAGAATTTATCATTCGAATGAcgatgacaatgacaatgacaatgatgataatggtgatgttaaaacaaaagaaaaacgcaaTGAACATCTTTTGGAATTGCTACAGTTCAAAGATCCAATGCGAAATGATGTGGTTTTGCGTAGTCCGCGTGGCAATCAGCCACGCTCATATACAACAGATGCACTCTATGCAGCACTCATGGATGTAAAATCGGGCGAATCGATTTATCGAGCGTCACAGATTCATGGCGTACCACGGAAAACATTGCGCAATTGGATGAAACGTTGGCACATAAAATCCGTCTTCCCAATGCCATATCAACTGAAAAGAGCTGCTGAAAAAAAGCGCCAAAATGGCCAGCCaaccgaaacaaaaacatcgcCCAAATTTTAA
- Protein Sequence
- MTGISQQFCVRWNSHLGSLGAAFPQLLAGQQFVDVTLACDGHQVHCHRLVLAACSSYFESLLSENPCKHPIIILPKDIKLWEIHALVDFMYKGQVNVSQAGLPQLLKCAETLQIRGLCGTESSLNEVANGKIDRCDSNILTNNCSPNFNFTSMFASNLLNNTNYQSDEDQQFRQQHYDLTTTRSTFSTINDNNSKSTNHRSNETTHAKNKNSQKIQHTTNKTTKEHGNGANKNSLIRLNENETSNTGSSEVNIKCEEIDSDPNVADDGMDDDLDEHSNSKQSEYTMQQNDAIVVDNDLHINCDGTKQTTDSNAQMHEIFTNDTDTISITKNDSIDEMNMCYSPSWSLHGDDGGGDHVRNSMNDYDCDTQQLPTSLKFNRNTMSIFVKRSNQINTTINHEHYSNTTQPCNNATSTDFSEDSVNIVCSPNFSGIERDTKHDMIEYNTSNRSYRRLGFNANRHMDDIQSRIYHSNDDDNDNDNDDNGDVKTKEKRNEHLLELLQFKDPMRNDVVLRSPRGNQPRSYTTDALYAALMDVKSGESIYRASQIHGVPRKTLRNWMKRWHIKSVFPMPYQLKRAAEKKRQNGQPTETKTSPKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288294;
- 90% Identity
- iTF_01288294;
- 80% Identity
- iTF_01288294;