Rmax009904.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- bab1
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000438.1:4698812-4719248[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-17 1.7e-13 50.6 0.0 1 43 423 466 423 468 0.95
Sequence Information
- Coding Sequence
- atGTCGAAAATAACCCCGGTAGCATCACCGTCACCGCCGTTACGATCAGCGAGCCGACATCAATCACCCCATACCAAGCACACAACATTAGATGCATCAATACATCGAAAACCGGAGCTTATATGCGATTCACCAACCGATTTTCAATCACTTGCCACCAAATCAACTGATGCATATCAAGATGATGAACCATATTCGGCAAATTTATCAACACCcacaattgatattgatgcGGATAATATTTGCGATAAAATCACCGTAAATACAGCACATCAGCAATTTTGTCTACGTTGGAATAATTATGGGcgaaatttaacaaatgtatttgatcaattgctacaaaatgaatcatttgttgATGTAACATTGGCCTGTGATGGTCAATCAATAAAAGCTCATAAAATGGTGCTATCGGCATGTTCACCATATTttcaaagtttattttttgataatcCGTGTCAACATCCAATTATTATAATGCGTGATGTTAAATGGACTGAATTGAAAGCAATTGTTGAATTCATGTATAAAGGTGAGATAAAGGTAAGCCAATCGGATATTGGTCCATTATTGCGTGTTGCTGAAATGCTTAAAATTCGTGGCCTAACCGAAGTGAATGGTGAACATGAATTTAATGCTGatacaaaaaaatcacattcagATAGTCCATTGCAACAATTATCTGAACATAGTGAAATAATGgcatcaacaataaaaaaaacacgatcAATCAAACGTTTGTCAACTGAATGGGATGAAAATACAAGTAATACATCACCACCATTAGAAAAGAATCGACGATCAAAACGATCATCACCGACATTTGATCGACATTCAACAGACAGTCCAAGAATTgATACAGCGACGGCAAGTGACTTtccaaaaaatgcaaatatcgCACAATCAACATCAGTAACGCCAAAAATTCGAAACAATATTTCACCATCAACTGGTGTTGGACGTCAACCAACAAATATAACCACATCGTTATTTCCAATATCTACACAAACAACAGTTGATCCATTGGCATCGATTGCAACTAGCGATGATTTGGAAATAAAACCTGGTATTGCTGAAATGATTCGAGAAGAAGAACGGGCAAAAGTTTtggaaaatacacaaacatgGCCGGGTGTTCCGTCAACCAACGCATTGGCTGAAAgttatcaatatcaattgcaaTCGATGTGGCAAAAATGCTGGAgtacaaatcaaaatttggtACATAATTTACGATTTCGTGAACGAGGTCCATTAAAATCATGGCGTCCCGAAACAATGGCTGAAGCGATTTTTAGCGTATTAAAAGATGGATTATCATTATCACAAGCGGCACGTAAATATGACATTCCATATCCAACATTTGTATTGTATGCAAATCGTGTGCATAATATGCTCGGTCCATCCATTGATTCTGGATTGGATTTACGGCCAAAAGGCAGAGGAAGACCGCAACGTATTCTACTTGGCATTTGGCCAGATGATCACATAAAAGgTGTCATCAAAGCTGTTGTGTTTCGTGATGCAAAGGATTTAAAAGAAGATCCAACTATACATTTGGCAGCGGCAGCTGCAGCAGCAGCCGCATATGGACGTCATTCGCCAGTGTATCCATTTCACGATGGTGCGATTCCTGGTTTTCATGCACCATCAAATGGTTTAATGTCAACTGGCACTGGAGctaatgaatcaatttcatcagaGGCTGCCGTTGCGATGGCCGCTGTAATGAATTTACGACAACAGCATTTAAATGCAACTGTTGCCAATCAACATCATCCTGAATCTGATTTGGCAAATTTTAGTTTACGTTCAGATAGCGGCGGTGTTGGATGTTTAAAACAACCAAAATTAGGATCACCCGCCACATCTAGTCAACCAAGTAgccatgaaatgaattttccaatgCCACGATTAGCATCGCCAGCTATACCAAATATTCATAGCATAAGCGGTCTATCTAGCTTACATTTAATGCAACAACATAATTTAAGTGGAAATGGTGATTTAATAAATGCAACAAATCGTACACGAAATCAAAGTAATGATTCACGAACGCCACCACATACAGAAACATCAAAACATTGTCATACAAATGATCAAATGACACGAAATGATAAAACATTAAGACATTCAAATACAATAGAACAACAGCTAAAACATTtaagcaaaacaacaacaaacagtaataataataacaacaataataataataataatacaaaagaAACATCGgAACACGTAAATAGCCCAGGCGGTGAAAAACAAATCAGTTTTCCAATTGATGACTTTGATTCGGTTGGTGTTGATATTGCAATCAATGGATTACCATTTAAATCATCATTGCATGGATTTTTATCATCAACATCACCAAATGAGGATCCACCATTATTCACTGATGACCTCAACGATTTTGATGAATCAGAATCAAGtccaaattcaaatacaagggaaaaaattaaaatggaaccATTGACTGAATGTCGAGGTCAGTAA
- Protein Sequence
- MSKITPVASPSPPLRSASRHQSPHTKHTTLDASIHRKPELICDSPTDFQSLATKSTDAYQDDEPYSANLSTPTIDIDADNICDKITVNTAHQQFCLRWNNYGRNLTNVFDQLLQNESFVDVTLACDGQSIKAHKMVLSACSPYFQSLFFDNPCQHPIIIMRDVKWTELKAIVEFMYKGEIKVSQSDIGPLLRVAEMLKIRGLTEVNGEHEFNADTKKSHSDSPLQQLSEHSEIMASTIKKTRSIKRLSTEWDENTSNTSPPLEKNRRSKRSSPTFDRHSTDSPRIDTATASDFPKNANIAQSTSVTPKIRNNISPSTGVGRQPTNITTSLFPISTQTTVDPLASIATSDDLEIKPGIAEMIREEERAKVLENTQTWPGVPSTNALAESYQYQLQSMWQKCWSTNQNLVHNLRFRERGPLKSWRPETMAEAIFSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDSGLDLRPKGRGRPQRILLGIWPDDHIKGVIKAVVFRDAKDLKEDPTIHLAAAAAAAAAYGRHSPVYPFHDGAIPGFHAPSNGLMSTGTGANESISSEAAVAMAAVMNLRQQHLNATVANQHHPESDLANFSLRSDSGGVGCLKQPKLGSPATSSQPSSHEMNFPMPRLASPAIPNIHSISGLSSLHLMQQHNLSGNGDLINATNRTRNQSNDSRTPPHTETSKHCHTNDQMTRNDKTLRHSNTIEQQLKHLSKTTTNSNNNNNNNNNNNTKETSEHVNSPGGEKQISFPIDDFDSVGVDIAINGLPFKSSLHGFLSSTSPNEDPPLFTDDLNDFDESESSPNSNTREKIKMEPLTECRGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350613;
- 90% Identity
- iTF_01288272;
- 80% Identity
- iTF_01288272;